EfficientBioAI: Making Bioimaging AI Models Efficient in Energy, Latency and Representation

Artificial intelligence (AI) has been widely used in bioimage image analysis nowadays, but the efficiency of AI models, like the energy consumption and latency is not ignorable due to the growing model size and complexity, as well as the fast-growing analysis needs in modern biomedical studies. Like we can compress large images for efficient storage and sharing, we can also compress the AI models for efficient applications and deployment. In this work, we present EfficientBioAI, a plug-and-play toolbox that can compress given bioimaging AI models for them to run with significantly reduced energy cost and inference time on both CPU and GPU, without compromise on accuracy. In some cases, the prediction accuracy could even increase after compression, since the compression procedure could remove redundant information in the model representation and therefore reduce over-fitting. From four different bioimage analysis applications, we observed around 2-5 times speed-up during inference and 30-80$\%$ saving in energy. Cutting the runtime of large scale bioimage analysis from days to hours or getting a two-minutes bioimaging AI model inference done in near real-time will open new doors for method development and biomedical discoveries. We hope our toolbox will facilitate resource-constrained bioimaging AI and accelerate large-scale AI-based quantitative biological studies in an eco-friendly way, as well as stimulate further research on the efficiency of bioimaging AI.

Non-Sequential Graph Script Induction via Multimedia Grounding

Online resources such as WikiHow compile a wide range of scripts for performing everyday tasks, which can assist models in learning to reason about procedures. However, the scripts are always presented in a linear manner, which does not reflect the flexibility displayed by people executing tasks in real life. For example, in the CrossTask Dataset, 64.5% of consecutive step pairs are also observed in the reverse order, suggesting their ordering is not fixed. In addition, each step has an average of 2.56 frequent next steps, demonstrating "branching". In this paper, we propose the new challenging task of non-sequential graph script induction, aiming to capture optional and interchangeable steps in procedural planning. To automate the induction of such graph scripts for given tasks, we propose to take advantage of loosely aligned videos of people performing the tasks. In particular, we design a multimodal framework to ground procedural videos to WikiHow textual steps and thus transform each video into an observed step path on the latent ground truth graph script. This key transformation enables us to train a script knowledge model capable of both generating explicit graph scripts for learnt tasks and predicting future steps given a partial step sequence. Our best model outperforms the strongest pure text/vision baselines by 17.52% absolute gains on F1@3 for next step prediction and 13.8% absolute gains on Acc@1 for partial sequence completion. Human evaluation shows our model outperforming the WikiHow linear baseline by 48.76% absolute gains in capturing sequential and non-sequential step relationships.

Masked and Permuted Implicit Context Learning for Scene Text Recognition

Scene Text Recognition (STR) is a challenging task due to variations in text style, shape, and background. Incorporating linguistic information is an effective way to enhance the robustness of STR models. Existing methods rely on permuted language modeling (PLM) or masked language modeling (MLM) to learn contextual information implicitly, either through an ensemble of permuted autoregressive (AR) LMs training or iterative non-autoregressive (NAR) decoding procedure. However, these methods exhibit limitations: PLM's AR decoding results in the lack of information about future characters, while MLM provides global information of the entire text but neglects dependencies among each predicted character. In this paper, we propose a Masked and Permuted Implicit Context Learning Network for STR, which unifies PLM and MLM within a single decoding architecture, inheriting the advantages of both approaches. We utilize the training procedure of PLM, and to integrate MLM, we incorporate word length information into the decoding process by introducing specific numbers of mask tokens. Experimental results demonstrate that our proposed model achieves state-of-the-art performance on standard benchmarks using both AR and NAR decoding procedures.

Joint Generative-Contrastive Representation Learning for Anomalous Sound Detection

In this paper, we propose a joint generative and contrastive representation learning method (GeCo) for anomalous sound detection (ASD). GeCo exploits a Predictive AutoEncoder (PAE) equipped with self-attention as a generative model to perform frame-level prediction. The output of the PAE together with original normal samples, are used for supervised contrastive representative learning in a multi-task framework. Besides cross-entropy loss between classes, contrastive loss is used to separate PAE output and original samples within each class. GeCo aims to better capture context information among frames, thanks to the self-attention mechanism for PAE model. Furthermore, GeCo combines generative and contrastive learning from which we aim to yield more effective and informative representations, compared to existing methods. Extensive experiments have been conducted on the DCASE2020 Task2 development dataset, showing that GeCo outperforms state-of-the-art generative and discriminative methods.

Visual Information Extraction in the Wild: Practical Dataset and End-to-end Solution

Visual information extraction (VIE), which aims to simultaneously perform OCR and information extraction in a unified framework, has drawn increasing attention due to its essential role in various applications like understanding receipts, goods, and traffic signs. However, as existing benchmark datasets for VIE mainly consist of document images without the adequate diversity of layout structures, background disturbs, and entity categories, they cannot fully reveal the challenges of real-world applications. In this paper, we propose a large-scale dataset consisting of camera images for VIE, which contains not only the larger variance of layout, backgrounds, and fonts but also much more types of entities. Besides, we propose a novel framework for end-to-end VIE that combines the stages of OCR and information extraction in an end-to-end learning fashion. Different from the previous end-to-end approaches that directly adopt OCR features as the input of an information extraction module, we propose to use contrastive learning to narrow the semantic gap caused by the difference between the tasks of OCR and information extraction. We evaluate the existing end-to-end methods for VIE on the proposed dataset and observe that the performance of these methods has a distinguishable drop from SROIE (a widely used English dataset) to our proposed dataset due to the larger variance of layout and entities. These results demonstrate our dataset is more practical for promoting advanced VIE algorithms. In addition, experiments demonstrate that the proposed VIE method consistently achieves the obvious performance gains on the proposed and SROIE datasets.

E2TIMT: Efficient and Effective Modal Adapter for Text Image Machine Translation

Text image machine translation (TIMT) aims to translate texts embedded in images from one source language to another target language. Existing methods, both two-stage cascade and one-stage end-to-end architectures, suffer from different issues. The cascade models can benefit from the large-scale optical character recognition (OCR) and MT datasets but the two-stage architecture is redundant. The end-to-end models are efficient but suffer from training data deficiency. To this end, in our paper, we propose an end-to-end TIMT model fully making use of the knowledge from existing OCR and MT datasets to pursue both an effective and efficient framework. More specifically, we build a novel modal adapter effectively bridging the OCR encoder and MT decoder. End-to-end TIMT loss and cross-modal contrastive loss are utilized jointly to align the feature distribution of the OCR and MT tasks. Extensive experiments show that the proposed method outperforms the existing two-stage cascade models and one-stage end-to-end models with a lighter and faster architecture. Furthermore, the ablation studies verify the generalization of our method, where the proposed modal adapter is effective to bridge various OCR and MT models.

Multi-Teacher Knowledge Distillation For Text Image Machine Translation

Text image machine translation (TIMT) has been widely used in various real-world applications, which translates source language texts in images into another target language sentence. Existing methods on TIMT are mainly divided into two categories: the recognition-then-translation pipeline model and the end-to-end model. However, how to transfer knowledge from the pipeline model into the end-to-end model remains an unsolved problem. In this paper, we propose a novel Multi-Teacher Knowledge Distillation (MTKD) method to effectively distillate knowledge into the end-to-end TIMT model from the pipeline model. Specifically, three teachers are utilized to improve the performance of the end-to-end TIMT model. The image encoder in the end-to-end TIMT model is optimized with the knowledge distillation guidance from the recognition teacher encoder, while the sequential encoder and decoder are improved by transferring knowledge from the translation sequential and decoder teacher models. Furthermore, both token and sentence-level knowledge distillations are incorporated to better boost the translation performance. Extensive experimental results show that our proposed MTKD effectively improves the text image translation performance and outperforms existing end-to-end and pipeline models with fewer parameters and less decoding time, illustrating that MTKD can take advantage of both pipeline and end-to-end models.

A Lightweight Recurrent Learning Network for Sustainable Compressed Sensing

Recently, deep learning-based compressed sensing (CS) has achieved great success in reducing the sampling and computational cost of sensing systems and improving the reconstruction quality. These approaches, however, largely overlook the issue of the computational cost; they rely on complex structures and task-specific operator designs, resulting in extensive storage and high energy consumption in CS imaging systems. In this paper, we propose a lightweight but effective deep neural network based on recurrent learning to achieve a sustainable CS system; it requires a smaller number of parameters but obtains high-quality reconstructions. Specifically, our proposed network consists of an initial reconstruction sub-network and a residual reconstruction sub-network. While the initial reconstruction sub-network has a hierarchical structure to progressively recover the image, reducing the number of parameters, the residual reconstruction sub-network facilitates recurrent residual feature extraction via recurrent learning to perform both feature fusion and deep reconstructions across different scales. In addition, we also demonstrate that, after the initial reconstruction, feature maps with reduced sizes are sufficient to recover the residual information, and thus we achieved a significant reduction in the amount of memory required. Extensive experiments illustrate that our proposed model can achieve a better reconstruction quality than existing state-of-the-art CS algorithms, and it also has a smaller number of network parameters than these algorithms. Our source codes are available at: https://github.com/C66YU/CSRN.

Quaternion Orthogonal Transformer for Facial Expression Recognition in the Wild

Facial expression recognition (FER) is a challenging topic in artificial intelligence. Recently, many researchers have attempted to introduce Vision Transformer (ViT) to the FER task. However, ViT cannot fully utilize emotional features extracted from raw images and requires a lot of computing resources. To overcome these problems, we propose a quaternion orthogonal transformer (QOT) for FER. Firstly, to reduce redundancy among features extracted from pre-trained ResNet-50, we use the orthogonal loss to decompose and compact these features into three sets of orthogonal sub-features. Secondly, three orthogonal sub-features are integrated into a quaternion matrix, which maintains the correlations between different orthogonal components. Finally, we develop a quaternion vision transformer (Q-ViT) for feature classification. The Q-ViT adopts quaternion operations instead of the original operations in ViT, which improves the final accuracies with fewer parameters. Experimental results on three in-the-wild FER datasets show that the proposed QOT outperforms several state-of-the-art models and reduces the computations.

Overview and Performance Analysis of Various Waveforms in High Mobility Scenarios

In the high-mobility scenarios of next-generation wireless communication systems (beyond 5G/6G), the performance of orthogonal frequency division multiplexing (OFDM) deteriorates drastically due to the loss of orthogonality between the subcarriers caused by large Doppler frequency shifts. Various emerging waveforms have been proposed for fast time-varying channels with excellent results. In this paper, we classify these waveforms from the perspective of their modulation domain and establish a unified framework to provide a comprehensive system structure comparison. Then we analyze bit error rate (BER) performance of each waveform in doubly selective channels. Through the discussions on their complexity and compatibility with OFDM systems, we finally give the candidate waveform suggestions.