Reconstructing the somatotopic organization of the corticospinal tract remains a challenge for modern tractography methods

The corticospinal tract (CST) is a critically important white matter fiber tract in the human brain that enables control of voluntary movements of the body. Diffusion MRI tractography is the only method that enables the study of the anatomy and variability of the CST pathway in human health. In this work, we explored the performance of six widely used tractography methods for reconstructing the CST and its somatotopic organization. We perform experiments using diffusion MRI data from the Human Connectome Project. Four quantitative measurements including reconstruction rate, the WM-GM interface coverage, anatomical distribution of streamlines, and correlation with cortical volumes to assess the advantages and limitations of each method. Overall, we conclude that while current tractography methods have made progress toward the well-known challenge of improving the reconstruction of the lateral projections of the CST, the overall problem of performing a comprehensive CST reconstruction, including clinically important projections in the lateral (hand and face area) and medial portions (leg area), remains an important challenge for diffusion MRI tractography.

FGAM:Fast Adversarial Malware Generation Method Based on Gradient Sign

Malware detection models based on deep learning have been widely used, but recent research shows that deep learning models are vulnerable to adversarial attacks. Adversarial attacks are to deceive the deep learning model by generating adversarial samples. When adversarial attacks are performed on the malware detection model, the attacker will generate adversarial malware with the same malicious functions as the malware, and make the detection model classify it as benign software. Studying adversarial malware generation can help model designers improve the robustness of malware detection models. At present, in the work on adversarial malware generation for byte-to-image malware detection models, there are mainly problems such as large amount of injection perturbation and low generation efficiency. Therefore, this paper proposes FGAM (Fast Generate Adversarial Malware), a method for fast generating adversarial malware, which iterates perturbed bytes according to the gradient sign to enhance adversarial capability of the perturbed bytes until the adversarial malware is successfully generated. It is experimentally verified that the success rate of the adversarial malware deception model generated by FGAM is increased by about 84\% compared with existing methods.

Doppler-Resilient Design of CAZAC Sequences for mmWave/THz Sensing Applications

Ultra-high-resolution target sensing has emerged as a key enabler for various cutting-edge applications, which can be realized by utilizing the millimeter wave/terahertz frequencies. However, the extremely high operating frequency inevitably leads to significant Doppler shift effects, especially for high-mobility applications, causing the degradation of sensing performance with high false alarm rate. To this end, this paper proposes a parameter design methodology of the well-known constant amplitude zero auto correlation (CAZAC) sequences, which aims at enhancing their resilience to Doppler shifts. Specifically, we suppress the sidelobes incurred by Doppler shifts for the peak-to-sidelobe ratio (PSLR) improvement within the range of interest (RoI) of the radar range profile. The Zadoff-Chu (ZC) sequence, as a representative member in the CAZAC family, is firstly considered. The impacts of its root index on range sidelobes are investigated based on number theory. For an arbitrary-length ZC sequence, a feasible range of the root index is derived to satisfy the requirement of PSLR within the scope of RoI. Furthermore, these design guidelines are extended to a general form of CAZAC sequences, where a low-complexity heuristic algorithm is developed for PSLR improvement. Simulation results demonstrate that under severe Doppler shifts, our proposed methodology could enhance the sensing performance by lowering the false alarm rate while maintaining the same detection rate, compared with its classical counterpart.

Label-Free Multi-Domain Machine Translation with Stage-wise Training

Most multi-domain machine translation models rely on domain-annotated data. Unfortunately, domain labels are usually unavailable in both training processes and real translation scenarios. In this work, we propose a label-free multi-domain machine translation model which requires only a few or no domain-annotated data in training and no domain labels in inference. Our model is composed of three parts: a backbone model, a domain discriminator taking responsibility to discriminate data from different domains, and a set of experts that transfer the decoded features from generic to specific. We design a stage-wise training strategy and train the three parts sequentially. To leverage the extra domain knowledge and improve the training stability, in the discriminator training stage, domain differences are modeled explicitly with clustering and distilled into the discriminator through a multi-classification task. Meanwhile, the Gumbel-Max sampling is adopted as the routing scheme in the expert training stage to achieve the balance of each expert in specialization and generalization. Experimental results on the German-to-English translation task show that our model significantly improves BLEU scores on six different domains and even outperforms most of the models trained with domain-annotated data.

UPDExplainer: an Interpretable Transformer-based Framework for Urban Physical Disorder Detection Using Street View Imagery

Urban Physical Disorder (UPD), such as old or abandoned buildings, broken sidewalks, litter, and graffiti, has a negative impact on residents' quality of life. They can also increase crime rates, cause social disorder, and pose a public health risk. Currently, there is a lack of efficient and reliable methods for detecting and understanding UPD. To bridge this gap, we propose UPDExplainer, an interpretable transformer-based framework for UPD detection. We first develop a UPD detection model based on the Swin Transformer architecture, which leverages readily accessible street view images to learn discriminative representations. In order to provide clear and comprehensible evidence and analysis, we subsequently introduce a UPD factor identification and ranking module that combines visual explanation maps with semantic segmentation maps. This novel integrated approach enables us to identify the exact objects within street view images that are responsible for physical disorders and gain insights into the underlying causes. Experimental results on the re-annotated Place Pulse 2.0 dataset demonstrate promising detection performance of the proposed method, with an accuracy of 79.9%. For a comprehensive evaluation of the method's ranking performance, we report the mean Average Precision (mAP), R-Precision (RPrec), and Normalized Discounted Cumulative Gain (NDCG), with success rates of 75.51%, 80.61%, and 82.58%, respectively. We also present a case study of detecting and ranking physical disorders in the southern region of downtown Los Angeles, California, to demonstrate the practicality and effectiveness of our framework.

Co-GRU Enhanced End-to-End Design for Long-haul Coherent Transmission Systems

In recent years, the end-to-end (E2E) scheme based on deep learning (DL), jointly optimizes the encoder and decoder parameters located of the system. Since the center-oriented Gated Recurrent Unit (Co-GRU) network structure satisfying gradient BP while having the ability to learn and compensate for intersymbol interference (ISI) with low computation cost, it is adopted for both the channel modeling and decoder implementation in the E2E design scheme proposed. Meanwhile, to obtain the constellation with the symmetrical distribution characteristic, the encoder and decoder are first E2E joint trained through NLIN model, and further trained on the Co-GRU channel replacing the SSFM channel as well as the subsequent digital signal processing (DSP) step. After the E2EDL process, the performance of the encoder and decoder trained is tested on the SSFM channel. For the E2E system with the Co-GRU based decoder, the gain of general mutual information (GMI) and the Q2-factor relative to the conventional QAM system, are respectively improved up to 0.2 bits/sym and 0.48dB for the long-haul 5-channel dual-polarization coherent system with 960 transmission distance at around the optimal launch power point. The work paves the way for the further study of the application for the Co-GRU structure in the data-driven E2E design of the experimental system, both for the channel modeling and the decoder performance improvement.

A fast and flexible algorithm for microstructure reconstruction combining simulated annealing and deep learning

The microstructure analyses of porous media have considerable research value for the study of macroscopic properties. As the premise of conducting these analyses, the accurate reconstruction of microstructure digital model is also an important component of the research. Computational reconstruction algorithms of microstructure have attracted much attention due to their low cost and excellent performance. However, it is still a challenge for computational reconstruction algorithms to achieve faster and more efficient reconstruction. The bottleneck lies in computational reconstruction algorithms, they are either too slow (traditional reconstruction algorithms) or not flexible to the training process (deep learning reconstruction algorithms). To address these limitations, we proposed a fast and flexible computational reconstruction algorithm, neural networks based on improved simulated annealing framework (ISAF-NN). The proposed algorithm is flexible and can complete training and reconstruction in a short time with only one two-dimensional image. By adjusting the size of input, it can also achieve reconstruction of arbitrary size. Finally, the proposed algorithm is experimentally performed on a variety of isotropic and anisotropic materials to verify the effectiveness and generalization.

MixPro: Data Augmentation with MaskMix and Progressive Attention Labeling for Vision Transformer

The recently proposed data augmentation TransMix employs attention labels to help visual transformers (ViT) achieve better robustness and performance. However, TransMix is deficient in two aspects: 1) The image cropping method of TransMix may not be suitable for vision transformer. 2) At the early stage of training, the model produces unreliable attention maps. TransMix uses unreliable attention maps to compute mixed attention labels that can affect the model. To address the aforementioned issues, we propose MaskMix and Progressive Attention Labeling (PAL) in image and label space, respectively. In detail, from the perspective of image space, we design MaskMix, which mixes two images based on a patch-like grid mask. In particular, the size of each mask patch is adjustable and is a multiple of the image patch size, which ensures each image patch comes from only one image and contains more global contents. From the perspective of label space, we design PAL, which utilizes a progressive factor to dynamically re-weight the attention weights of the mixed attention label. Finally, we combine MaskMix and Progressive Attention Labeling as our new data augmentation method, named MixPro. The experimental results show that our method can improve various ViT-based models at scales on ImageNet classification (73.8\% top-1 accuracy based on DeiT-T for 300 epochs). After being pre-trained with MixPro on ImageNet, the ViT-based models also demonstrate better transferability to semantic segmentation, object detection, and instance segmentation. Furthermore, compared to TransMix, MixPro also shows stronger robustness on several benchmarks. The code will be released at https://github.com/fistyee/MixPro.

A Registration- and Uncertainty-based Framework for White Matter Tract Segmentation With Only One Annotated Subject

White matter (WM) tract segmentation based on diffusion magnetic resonance imaging (dMRI) plays an important role in the analysis of human health and brain diseases. However, the annotation of WM tracts is time-consuming and needs experienced neuroanatomists. In this study, to explore tract segmentation in the challenging setting of minimal annotations, we propose a novel framework utilizing only one annotated subject (subject-level one-shot) for tract segmentation. Our method is constructed by proposed registration-based peak augmentation (RPA) and uncertainty-based refining (URe) modules. RPA module synthesizes pseudo subjects and their corresponding labels to improve the tract segmentation performance. The proposed URe module alleviates the negative influence of the low-confidence voxels on pseudo subjects. Experimental results show that our method outperforms other state-of-the-art methods by a large margin, and our proposed modules are effective. Overall, our method achieves accurate whole-brain tract segmentation with only one annotated subject. Our code is available at https://github.com/HaoXu0507/ISBI2023-One-Shot-WM-Tract-Segmentation.