The state-of-the-art in Cardiac MRI Reconstruction: Results of the CMRxRecon Challenge in MICCAI 2023

Cardiac MRI, crucial for evaluating heart structure and function, faces limitations like slow imaging and motion artifacts. Undersampling reconstruction, especially data-driven algorithms, has emerged as a promising solution to accelerate scans and enhance imaging performance using highly under-sampled data. Nevertheless, the scarcity of publicly available cardiac k-space datasets and evaluation platform hinder the development of data-driven reconstruction algorithms. To address this issue, we organized the Cardiac MRI Reconstruction Challenge (CMRxRecon) in 2023, in collaboration with the 26th International Conference on MICCAI. CMRxRecon presented an extensive k-space dataset comprising cine and mapping raw data, accompanied by detailed annotations of cardiac anatomical structures. With overwhelming participation, the challenge attracted more than 285 teams and over 600 participants. Among them, 22 teams successfully submitted Docker containers for the testing phase, with 7 teams submitted for both cine and mapping tasks. All teams use deep learning based approaches, indicating that deep learning has predominately become a promising solution for the problem. The first-place winner of both tasks utilizes the E2E-VarNet architecture as backbones. In contrast, U-Net is still the most popular backbone for both multi-coil and single-coil reconstructions. This paper provides a comprehensive overview of the challenge design, presents a summary of the submitted results, reviews the employed methods, and offers an in-depth discussion that aims to inspire future advancements in cardiac MRI reconstruction models. The summary emphasizes the effective strategies observed in Cardiac MRI reconstruction, including backbone architecture, loss function, pre-processing techniques, physical modeling, and model complexity, thereby providing valuable insights for further developments in this field.

FPGA Deployment of LFADS for Real-time Neuroscience Experiments

Large-scale recordings of neural activity are providing new opportunities to study neural population dynamics. A powerful method for analyzing such high-dimensional measurements is to deploy an algorithm to learn the low-dimensional latent dynamics. LFADS (Latent Factor Analysis via Dynamical Systems) is a deep learning method for inferring latent dynamics from high-dimensional neural spiking data recorded simultaneously in single trials. This method has shown a remarkable performance in modeling complex brain signals with an average inference latency in milliseconds. As our capacity of simultaneously recording many neurons is increasing exponentially, it is becoming crucial to build capacity for deploying low-latency inference of the computing algorithms. To improve the real-time processing ability of LFADS, we introduce an efficient implementation of the LFADS models onto Field Programmable Gate Arrays (FPGA). Our implementation shows an inference latency of 41.97 $\mu$s for processing the data in a single trial on a Xilinx U55C.

CycLight: learning traffic signal cooperation with a cycle-level strategy

This study introduces CycLight, a novel cycle-level deep reinforcement learning (RL) approach for network-level adaptive traffic signal control (NATSC) systems. Unlike most traditional RL-based traffic controllers that focus on step-by-step decision making, CycLight adopts a cycle-level strategy, optimizing cycle length and splits simultaneously using Parameterized Deep Q-Networks (PDQN) algorithm. This cycle-level approach effectively reduces the computational burden associated with frequent data communication, meanwhile enhancing the practicality and safety of real-world applications. A decentralized framework is formulated for multi-agent cooperation, while attention mechanism is integrated to accurately assess the impact of the surroundings on the current intersection. CycLight is tested in a large synthetic traffic grid using the microscopic traffic simulation tool, SUMO. Experimental results not only demonstrate the superiority of CycLight over other state-of-the-art approaches but also showcase its robustness against information transmission delays.

Image Reconstruction for Accelerated MR Scan with Faster Fourier Convolutional Neural Networks

Partial scan is a common approach to accelerate Magnetic Resonance Imaging (MRI) data acquisition in both 2D and 3D settings. However, accurately reconstructing images from partial scan data (i.e., incomplete k-space matrices) remains challenging due to lack of an effectively global receptive field in both spatial and k-space domains. To address this problem, we propose the following: (1) a novel convolutional operator called Faster Fourier Convolution (FasterFC) to replace the two consecutive convolution operations typically used in convolutional neural networks (e.g., U-Net, ResNet). Based on the spectral convolution theorem in Fourier theory, FasterFC employs alternating kernels of size 1 in 3D case) in different domains to extend the dual-domain receptive field to the global and achieves faster calculation speed than traditional Fast Fourier Convolution (FFC). (2) A 2D accelerated MRI method, FasterFC-End-to-End-VarNet, which uses FasterFC to improve the sensitivity maps and reconstruction quality. (3) A multi-stage 3D accelerated MRI method called FasterFC-based Single-to-group Network (FAS-Net) that utilizes a single-to-group algorithm to guide k-space domain reconstruction, followed by FasterFC-based cascaded convolutional neural networks to expand the effective receptive field in the dual-domain. Experimental results on the fastMRI and Stanford MRI Data datasets demonstrate that FasterFC improves the quality of both 2D and 3D reconstruction. Moreover, FAS-Net, as a 3D high-resolution multi-coil (eight) accelerated MRI method, achieves superior reconstruction performance in both qualitative and quantitative results compared with state-of-the-art 2D and 3D methods.

SWheg: A Wheel-Leg Transformable Robot With Minimalist Actuator Realization

This article presents the design, implementation, and performance evaluation of SWheg, a novel modular wheel-leg transformable robot family with minimalist actuator realization. SWheg takes advantage of both wheeled and legged locomotion by seamlessly integrating them on a single platform. In contrast to other designs that use multiple actuators, SWheg uses only one actuator to drive the transformation of all the wheel-leg modules in sync. This means an N-legged SWheg robot requires only N+1 actuators, which can significantly reduce the cost and malfunction rate of the platform. The tendon-driven wheel-leg transformation mechanism based on a four-bar linkage can perform fast morphology transitions between wheels and legs. We validated the design principle with two SWheg robots with four and six wheel-leg modules separately, namely Quadrupedal SWheg and Hexapod SWheg. The design process, mechatronics infrastructure, and the gait behavioral development of both platforms were discussed. The performance of the robot was evaluated in various scenarios, including driving and turning in wheeled mode, step crossing, irregular terrain passing, and stair climbing in legged mode. The comparison between these two platforms was also discussed.

Dual-Domain Reconstruction Networks with V-Net and K-Net for fast MRI

Purpose: To introduce a dual-domain reconstruction network with V-Net and K-Net for accurate MR image reconstruction from undersampled k-space data. Methods: Most state-of-the-art reconstruction methods apply U-Net or cascaded U-Nets in image domain and/or k-space domain. Nevertheless, these methods have following problems: (1) Directly applying U-Net in k-space domain is not optimal for extracting features in k-space domain; (2) Classical image-domain oriented U-Net is heavy-weight and hence is inefficient to be cascaded many times for yielding good reconstruction accuracy; (3) Classical image-domain oriented U-Net does not fully make use information of encoder network for extracting features in decoder network; and (4) Existing methods are ineffective in simultaneously extracting and fusing features in image domain and its dual k-space domain. To tackle these problems, we propose in this paper (1) an image-domain encoder-decoder sub-network called V-Net which is more light-weight for cascading and effective in fully utilizing features in the encoder for decoding, (2) a k-space domain sub-network called K-Net which is more suitable for extracting hierarchical features in k-space domain, and (3) a dual-domain reconstruction network where V-Nets and K-Nets are parallelly and effectively combined and cascaded. Results: Extensive experimental results on the challenging fastMRI dataset demonstrate that the proposed KV-Net can reconstruct high-quality images and outperform current state-of-the-art approaches with fewer parameters. Conclusions: To reconstruct images effectively and efficiently from incomplete k-space data, we have presented a parallel dual-domain KV-Net to combine K-Nets and V-Nets. The KV-Net is more lightweight than state-of-the-art methods but achieves better reconstruction performance.

Foreground segmentation based on multi-resolution and matting

We propose a foreground segmentation algorithm that does foreground extraction under different scales and refines the result by matting. First, the input image is filtered and resampled to 5 different resolutions. Then each of them is segmented by adaptive figure-ground classification and the best segmentation is automatically selected by an evaluation score that maximizes the difference between foreground and background. This segmentation is upsampled to the original size, and a corresponding trimap is built. Closed-form matting is employed to label the boundary region, and the result is refined by a final figure-ground classification. Experiments show the success of our method in treating challenging images with cluttered background and adapting to loose initial bounding-box.