Endora: Video Generation Models as Endoscopy Simulators

Generative models hold promise for revolutionizing medical education, robot-assisted surgery, and data augmentation for machine learning. Despite progress in generating 2D medical images, the complex domain of clinical video generation has largely remained untapped.This paper introduces \model, an innovative approach to generate medical videos that simulate clinical endoscopy scenes. We present a novel generative model design that integrates a meticulously crafted spatial-temporal video transformer with advanced 2D vision foundation model priors, explicitly modeling spatial-temporal dynamics during video generation. We also pioneer the first public benchmark for endoscopy simulation with video generation models, adapting existing state-of-the-art methods for this endeavor.Endora demonstrates exceptional visual quality in generating endoscopy videos, surpassing state-of-the-art methods in extensive testing. Moreover, we explore how this endoscopy simulator can empower downstream video analysis tasks and even generate 3D medical scenes with multi-view consistency. In a nutshell, Endora marks a notable breakthrough in the deployment of generative AI for clinical endoscopy research, setting a substantial stage for further advances in medical content generation. For more details, please visit our project page: https://endora-medvidgen.github.io/.

Bayesian Personalized Federated Learning with Shared and Personalized Uncertainty Representations

Bayesian personalized federated learning (BPFL) addresses challenges in existing personalized FL (PFL). BPFL aims to quantify the uncertainty and heterogeneity within and across clients towards uncertainty representations by addressing the statistical heterogeneity of client data. In PFL, some recent preliminary work proposes to decompose hidden neural representations into shared and local components and demonstrates interesting results. However, most of them do not address client uncertainty and heterogeneity in FL systems, while appropriately decoupling neural representations is challenging and often ad hoc. In this paper, we make the first attempt to introduce a general BPFL framework to decompose and jointly learn shared and personalized uncertainty representations on statistically heterogeneous client data over time. A Bayesian federated neural network BPFed instantiates BPFL by jointly learning cross-client shared uncertainty and client-specific personalized uncertainty over statistically heterogeneous and randomly participating clients. We further involve continual updating of prior distribution in BPFed to speed up the convergence and avoid catastrophic forgetting. Theoretical analysis and guarantees are provided in addition to the experimental evaluation of BPFed against the diversified baselines.

GPT4Graph: Can Large Language Models Understand Graph Structured Data ? An Empirical Evaluation and Benchmarking

Large language models~(LLM) like ChatGPT have become indispensable to artificial general intelligence~(AGI), demonstrating excellent performance in various natural language processing tasks. In the real world, graph data is ubiquitous and an essential part of AGI and prevails in domains like social network analysis, bioinformatics and recommender systems. The training corpus of large language models often includes some algorithmic components, which allows them to achieve certain effects on some graph data-related problems. However, there is still little research on their performance on a broader range of graph-structured data. In this study, we conduct an extensive investigation to assess the proficiency of LLMs in comprehending graph data, employing a diverse range of structural and semantic-related tasks. Our analysis encompasses 10 distinct tasks that evaluate the LLMs' capabilities in graph understanding. Through our study, we not only uncover the current limitations of language models in comprehending graph structures and performing associated reasoning tasks but also emphasize the necessity for further advancements and novel approaches to enhance their graph processing capabilities. Our findings contribute valuable insights towards bridging the gap between language models and graph understanding, paving the way for more effective graph mining and knowledge extraction.

Leveraging LLMs for KPIs Retrieval from Hybrid Long-Document: A Comprehensive Framework and Dataset

Large Language Models (LLMs) demonstrate exceptional performance in textual understanding and tabular reasoning tasks. However, their ability to comprehend and analyze hybrid text, containing textual and tabular data, remains underexplored. In this research, we specialize in harnessing the potential of LLMs to comprehend critical information from financial reports, which are hybrid long-documents. We propose an Automated Financial Information Extraction (AFIE) framework that enhances LLMs' ability to comprehend and extract information from financial reports. To evaluate AFIE, we develop a Financial Reports Numerical Extraction (FINE) dataset and conduct an extensive experimental analysis. Our framework is effectively validated on GPT-3.5 and GPT-4, yielding average accuracy increases of 53.94% and 33.77%, respectively, compared to a naive method. These results suggest that the AFIE framework offers accuracy for automated numerical extraction from complex, hybrid documents.

CMSG Cross-Media Semantic-Graph Feature Matching Algorithm for Autonomous Vehicle Relocalization

Relocalization is the basis of map-based localization algorithms. Camera and LiDAR map-based methods are pervasive since their robustness under different scenarios. Generally, mapping and localization using the same sensor have better accuracy since matching features between the same type of data is easier. However, due to the camera's lack of 3D information and the high cost of LiDAR, cross-media methods are developing, which combined live image data and Lidar map. Although matching features between different media is challenging, we believe cross-media is the tendency for AV relocalization since its low cost and accuracy can be comparable to the same-sensor-based methods. In this paper, we propose CMSG, a novel cross-media algorithm for AV relocalization tasks. Semantic features are utilized for better interpretation the correlation between point clouds and image features. What's more, abstracted semantic graph nodes are introduced, and a graph network architecture is integrated to better extract the similarity of semantic features. Validation experiments are conducted on the KITTI odometry dataset. Our results show that CMSG can have comparable or even better accuracy compared to current single-sensor-based methods at a speed of 25 FPS on NVIDIA 1080 Ti GPU.

A Probabilistic Generative Model for Tracking Multi-Knowledge Concept Mastery Probability

Knowledge tracing aims to track students' knowledge status over time to predict students' future performance accurately. Markov chain-based knowledge tracking (MCKT) models can track knowledge concept mastery probability over time. However, as the number of tracked knowledge concepts increases, the time complexity of MCKT predicting student performance increases exponentially (also called explaining away problem. In addition, the existing MCKT models only consider the relationship between students' knowledge status and problems when modeling students' responses but ignore the relationship between knowledge concepts in the same problem. To address these challenges, we propose an inTerpretable pRobAbilistiC gEnerative moDel (TRACED), which can track students' numerous knowledge concepts mastery probabilities over time. To solve \emph{explain away problem}, we design Long and Short-Term Memory (LSTM)-based networks to approximate the posterior distribution, predict students' future performance, and propose a heuristic algorithm to train LSTMs and probabilistic graphical model jointly. To better model students' exercise responses, we proposed a logarithmic linear model with three interactive strategies, which models students' exercise responses by considering the relationship among students' knowledge status, knowledge concept, and problems. We conduct experiments with four real-world datasets in three knowledge-driven tasks. The experimental results show that TRACED outperforms existing knowledge tracing methods in predicting students' future performance and can learn the relationship among students, knowledge concepts, and problems from students' exercise sequences. We also conduct several case studies. The case studies show that TRACED exhibits excellent interpretability and thus has the potential for personalized automatic feedback in the real-world educational environment.

Learning Rate Perturbation: A Generic Plugin of Learning Rate Schedule towards Flatter Local Minima

Learning rate is one of the most important hyper-parameters that has a significant influence on neural network training. Learning rate schedules are widely used in real practice to adjust the learning rate according to pre-defined schedules for fast convergence and good generalization. However, existing learning rate schedules are all heuristic algorithms and lack theoretical support. Therefore, people usually choose the learning rate schedules through multiple ad-hoc trials, and the obtained learning rate schedules are sub-optimal. To boost the performance of the obtained sub-optimal learning rate schedule, we propose a generic learning rate schedule plugin, called LEArning Rate Perturbation (LEAP), which can be applied to various learning rate schedules to improve the model training by introducing a certain perturbation to the learning rate. We found that, with such a simple yet effective strategy, training processing exponentially favors flat minima rather than sharp minima with guaranteed convergence, which leads to better generalization ability. In addition, we conduct extensive experiments which show that training with LEAP can improve the performance of various deep learning models on diverse datasets using various learning rate schedules (including constant learning rate).

HTGN-BTW: Heterogeneous Temporal Graph Network with Bi-Time-Window Training Strategy for Temporal Link Prediction

With the development of temporal networks such as E-commerce networks and social networks, the issue of temporal link prediction has attracted increasing attention in recent years. The Temporal Link Prediction task of WSDM Cup 2022 expects a single model that can work well on two kinds of temporal graphs simultaneously, which have quite different characteristics and data properties, to predict whether a link of a given type will occur between two given nodes within a given time span. Our team, named as nothing here, regards this task as a link prediction task in heterogeneous temporal networks and proposes a generic model, i.e., Heterogeneous Temporal Graph Network (HTGN), to solve such temporal link prediction task with the unfixed time intervals and the diverse link types. That is, HTGN can adapt to the heterogeneity of links and the prediction with unfixed time intervals within an arbitrary given time period. To train the model, we design a Bi-Time-Window training strategy (BTW) which has two kinds of mini-batches from two kinds of time windows. As a result, for the final test, we achieved an AUC of 0.662482 on dataset A, an AUC of 0.906923 on dataset B, and won 2nd place with an Average T-scores of 0.628942.

GBK-GNN: Gated Bi-Kernel Graph Neural Networks for Modeling Both Homophily and Heterophily

Graph Neural Networks (GNNs) are widely used on a variety of graph-based machine learning tasks. For node-level tasks, GNNs have strong power to model the homophily property of graphs (i.e., connected nodes are more similar) while their ability to capture heterophily property is often doubtful. This is partially caused by the design of the feature transformation with the same kernel for the nodes in the same hop and the followed aggregation operator. One kernel cannot model the similarity and the dissimilarity (i.e., the positive and negative correlation) between node features simultaneously even though we use attention mechanisms like Graph Attention Network (GAT), since the weight calculated by attention is always a positive value. In this paper, we propose a novel GNN model based on a bi-kernel feature transformation and a selection gate. Two kernels capture homophily and heterophily information respectively, and the gate is introduced to select which kernel we should use for the given node pairs. We conduct extensive experiments on various datasets with different homophily-heterophily properties. The experimental results show consistent and significant improvements against state-of-the-art GNN methods.