Analysis of Distributed Optimization Algorithms on a Real Processing-In-Memory System

Machine Learning (ML) training on large-scale datasets is a very expensive and time-consuming workload. Processor-centric architectures (e.g., CPU, GPU) commonly used for modern ML training workloads are limited by the data movement bottleneck, i.e., due to repeatedly accessing the training dataset. As a result, processor-centric systems suffer from performance degradation and high energy consumption. Processing-In-Memory (PIM) is a promising solution to alleviate the data movement bottleneck by placing the computation mechanisms inside or near memory. Our goal is to understand the capabilities and characteristics of popular distributed optimization algorithms on real-world PIM architectures to accelerate data-intensive ML training workloads. To this end, we 1) implement several representative centralized distributed optimization algorithms on UPMEM's real-world general-purpose PIM system, 2) rigorously evaluate these algorithms for ML training on large-scale datasets in terms of performance, accuracy, and scalability, 3) compare to conventional CPU and GPU baselines, and 4) discuss implications for future PIM hardware and the need to shift to an algorithm-hardware codesign perspective to accommodate decentralized distributed optimization algorithms. Our results demonstrate three major findings: 1) Modern general-purpose PIM architectures can be a viable alternative to state-of-the-art CPUs and GPUs for many memory-bound ML training workloads, when operations and datatypes are natively supported by PIM hardware, 2) the importance of carefully choosing the optimization algorithm that best fit PIM, and 3) contrary to popular belief, contemporary PIM architectures do not scale approximately linearly with the number of nodes for many data-intensive ML training workloads. To facilitate future research, we aim to open-source our complete codebase.

Class Similarity Transition: Decoupling Class Similarities and Imbalance from Generalized Few-shot Segmentation

In Generalized Few-shot Segmentation (GFSS), a model is trained with a large corpus of base class samples and then adapted on limited samples of novel classes. This paper focuses on the relevance between base and novel classes, and improves GFSS in two aspects: 1) mining the similarity between base and novel classes to promote the learning of novel classes, and 2) mitigating the class imbalance issue caused by the volume difference between the support set and the training set. Specifically, we first propose a similarity transition matrix to guide the learning of novel classes with base class knowledge. Then, we leverage the Label-Distribution-Aware Margin (LDAM) loss and Transductive Inference to the GFSS task to address the problem of class imbalance as well as overfitting the support set. In addition, by extending the probability transition matrix, the proposed method can mitigate the catastrophic forgetting of base classes when learning novel classes. With a simple training phase, our proposed method can be applied to any segmentation network trained on base classes. We validated our methods on the adapted version of OpenEarthMap. Compared to existing GFSS baselines, our method excels them all from 3% to 7% and ranks second in the OpenEarthMap Land Cover Mapping Few-Shot Challenge at the completion of this paper. Code: https://github.com/earth-insights/ClassTrans

Jointly Learning Representations for Map Entities via Heterogeneous Graph Contrastive Learning

The electronic map plays a crucial role in geographic information systems, serving various urban managerial scenarios and daily life services. Developing effective Map Entity Representation Learning (MERL) methods is crucial to extracting embedding information from electronic maps and converting map entities into representation vectors for downstream applications. However, existing MERL methods typically focus on one specific category of map entities, such as POIs, road segments, or land parcels, which is insufficient for real-world diverse map-based applications and might lose latent structural and semantic information interacting between entities of different types. Moreover, using representations generated by separate models for different map entities can introduce inconsistencies. Motivated by this, we propose a novel method named HOME-GCL for learning representations of multiple categories of map entities. Our approach utilizes a heterogeneous map entity graph (HOME graph) that integrates both road segments and land parcels into a unified framework. A HOME encoder with parcel-segment joint feature encoding and heterogeneous graph transformer is then deliberately designed to convert segments and parcels into representation vectors. Moreover, we introduce two types of contrastive learning tasks, namely intra-entity and inter-entity tasks, to train the encoder in a self-supervised manner. Extensive experiments on three large-scale datasets covering road segment-based, land parcel-based, and trajectory-based tasks demonstrate the superiority of our approach. To the best of our knowledge, HOME-GCL is the first attempt to jointly learn representations for road segments and land parcels using a unified model.

An Intra-BRNN and GB-RVQ Based END-TO-END Neural Audio Codec

Recently, neural networks have proven to be effective in performing speech coding task at low bitrates. However, under-utilization of intra-frame correlations and the error of quantizer specifically degrade the reconstructed audio quality. To improve the coding quality, we present an end-to-end neural speech codec, namely CBRC (Convolutional and Bidirectional Recurrent neural Codec). An interleaved structure using 1D-CNN and Intra-BRNN is designed to exploit the intra-frame correlations more efficiently. Furthermore, Group-wise and Beam-search Residual Vector Quantizer (GB-RVQ) is used to reduce the quantization noise. CBRC encodes audio every 20ms with no additional latency, which is suitable for real-time communication. Experimental results demonstrate the superiority of the proposed codec when comparing CBRC at 3kbps with Opus at 12kbps.

Generative and Contrastive Paradigms Are Complementary for Graph Self-Supervised Learning

For graph self-supervised learning (GSSL), masked autoencoder (MAE) follows the generative paradigm and learns to reconstruct masked graph edges or node features. Contrastive Learning (CL) maximizes the similarity between augmented views of the same graph and is widely used for GSSL. However, MAE and CL are considered separately in existing works for GSSL. We observe that the MAE and CL paradigms are complementary and propose the graph contrastive masked autoencoder (GCMAE) framework to unify them. Specifically, by focusing on local edges or node features, MAE cannot capture global information of the graph and is sensitive to particular edges and features. On the contrary, CL excels in extracting global information because it considers the relation between graphs. As such, we equip GCMAE with an MAE branch and a CL branch, and the two branches share a common encoder, which allows the MAE branch to exploit the global information extracted by the CL branch. To force GCMAE to capture global graph structures, we train it to reconstruct the entire adjacency matrix instead of only the masked edges as in existing works. Moreover, a discrimination loss is proposed for feature reconstruction, which improves the disparity between node embeddings rather than reducing the reconstruction error to tackle the feature smoothing problem of MAE. We evaluate GCMAE on four popular graph tasks (i.e., node classification, node clustering, link prediction, and graph classification) and compare with 14 state-of-the-art baselines. The results show that GCMAE consistently provides good accuracy across these tasks, and the maximum accuracy improvement is up to 3.2% compared with the best-performing baseline.

BenchTemp: A General Benchmark for Evaluating Temporal Graph Neural Networks

To handle graphs in which features or connectivities are evolving over time, a series of temporal graph neural networks (TGNNs) have been proposed. Despite the success of these TGNNs, the previous TGNN evaluations reveal several limitations regarding four critical issues: 1) inconsistent datasets, 2) inconsistent evaluation pipelines, 3) lacking workload diversity, and 4) lacking efficient comparison. Overall, there lacks an empirical study that puts TGNN models onto the same ground and compares them comprehensively. To this end, we propose BenchTemp, a general benchmark for evaluating TGNN models on various workloads. BenchTemp provides a set of benchmark datasets so that different TGNN models can be fairly compared. Further, BenchTemp engineers a standard pipeline that unifies the TGNN evaluation. With BenchTemp, we extensively compare the representative TGNN models on different tasks (e.g., link prediction and node classification) and settings (transductive and inductive), w.r.t. both effectiveness and efficiency metrics. We have made BenchTemp publicly available at https://github.com/qianghuangwhu/benchtemp.

Unified Data Management and Comprehensive Performance Evaluation for Urban Spatial-Temporal Prediction [Experiment, Analysis & Benchmark]

The field of urban spatial-temporal prediction is advancing rapidly with the development of deep learning techniques and the availability of large-scale datasets. However, challenges persist in accessing and utilizing diverse urban spatial-temporal datasets from different sources and stored in different formats, as well as determining effective model structures and components with the proliferation of deep learning models. This work addresses these challenges and provides three significant contributions. Firstly, we introduce "atomic files", a unified storage format designed for urban spatial-temporal big data, and validate its effectiveness on 40 diverse datasets, simplifying data management. Secondly, we present a comprehensive overview of technological advances in urban spatial-temporal prediction models, guiding the development of robust models. Thirdly, we conduct extensive experiments using diverse models and datasets, establishing a performance leaderboard and identifying promising research directions. Overall, this work effectively manages urban spatial-temporal data, guides future efforts, and facilitates the development of accurate and efficient urban spatial-temporal prediction models. It can potentially make long-term contributions to urban spatial-temporal data management and prediction, ultimately leading to improved urban living standards.

Towards Efficient and Comprehensive Urban Spatial-Temporal Prediction: A Unified Library and Performance Benchmark

As deep learning technology advances and more urban spatial-temporal data accumulates, an increasing number of deep learning models are being proposed to solve urban spatial-temporal prediction problems. However, there are limitations in the existing field, including open-source data being in various formats and difficult to use, few papers making their code and data openly available, and open-source models often using different frameworks and platforms, making comparisons challenging. A standardized framework is urgently needed to implement and evaluate these methods. To address these issues, we provide a comprehensive review of urban spatial-temporal prediction and propose a unified storage format for spatial-temporal data called atomic files. We also propose LibCity, an open-source library that offers researchers a credible experimental tool and a convenient development framework. In this library, we have reproduced 65 spatial-temporal prediction models and collected 55 spatial-temporal datasets, allowing researchers to conduct comprehensive experiments conveniently. Using LibCity, we conducted a series of experiments to validate the effectiveness of different models and components, and we summarized promising future technology developments and research directions for spatial-temporal prediction. By enabling fair model comparisons, designing a unified data storage format, and simplifying the process of developing new models, LibCity is poised to make significant contributions to the spatial-temporal prediction field.

Two-stage MR Image Segmentation Method for Brain Tumors based on Attention Mechanism

Multimodal magnetic resonance imaging (MRI) can reveal different patterns of human tissue and is crucial for clinical diagnosis. However, limited by cost, noise and manual labeling, obtaining diverse and reliable multimodal MR images remains a challenge. For the same lesion, different MRI manifestations have great differences in background information, coarse positioning and fine structure. In order to obtain better generation and segmentation performance, a coordination-spatial attention generation adversarial network (CASP-GAN) based on the cycle-consistent generative adversarial network (CycleGAN) is proposed. The performance of the generator is optimized by introducing the Coordinate Attention (CA) module and the Spatial Attention (SA) module. The two modules can make full use of the captured location information, accurately locating the interested region, and enhancing the generator model network structure. The ability to extract the structure information and the detailed information of the original medical image can help generate the desired image with higher quality. There exist some problems in the original CycleGAN that the training time is long, the parameter amount is too large, and it is difficult to converge. In response to this problem, we introduce the Coordinate Attention (CA) module to replace the Res Block to reduce the number of parameters, and cooperate with the spatial information extraction network above to strengthen the information extraction ability. On the basis of CASP-GAN, an attentional generative cross-modality segmentation (AGCMS) method is further proposed. This method inputs the modalities generated by CASP-GAN and the real modalities into the segmentation network for brain tumor segmentation. Experimental results show that CASP-GAN outperforms CycleGAN and some state-of-the-art methods in PSNR, SSMI and RMSE in most tasks.