Cross-Task Benchmarking of CNN Architectures

This project provides a comparative study of dynamic convolutional neural networks (CNNs) for various tasks, including image classification, segmentation, and time series analysis. Based on the ResNet-18 architecture, we compare five variants of CNNs: the vanilla CNN, the hard attention-based CNN, the soft attention-based CNN with local (pixel-wise) and global (image-wise) feature attention, and the omni-directional CNN (ODConv). Experiments on Tiny ImageNet, Pascal VOC, and the UCR Time Series Classification Archive illustrate that attention mechanisms and dynamic convolution methods consistently exceed conventional CNNs in accuracy, efficiency, and computational performance. ODConv was especially effective on morphologically complex images by being able to dynamically adjust to varying spatial patterns. Dynamic CNNs enhanced feature representation and cross-task generalization through adaptive kernel modulation. This project provides perspectives on advanced CNN design architecture for multiplexed data modalities and indicates promising directions in neural network engineering.

Electrocardiogram Classification with Transformers Using Koopman and Wavelet Features

Electrocardiogram (ECG) analysis is vital for detecting cardiac abnormalities, yet robust automated classification is challenging due to the complexity and variability of physiological signals. In this work, we investigate transformer-based ECG classification using features derived from the Koopman operator and wavelet transforms. Two tasks are studied: (1) binary classification (Normal vs. Non-normal), and (2) four-class classification (Normal, Atrial Fibrillation, Ventricular Arrhythmia, Block). We use Extended Dynamic Mode Decomposition (EDMD) to approximate the Koopman operator. Our results show that wavelet features excel in binary classification, while Koopman features, when paired with transformers, achieve superior performance in the four-class setting. A simple hybrid of Koopman and wavelet features does not improve accuracy. However, selecting an appropriate EDMD dictionary -- specifically a radial basis function dictionary with tuned parameters -- yields significant gains, surpassing the wavelet-only baseline and the hybrid wavelet-Koopman system. We also present a Koopman-based reconstruction analysis for interpretable insights into the learned dynamics and compare against a recurrent neural network baseline. Overall, our findings demonstrate the effectiveness of Koopman-based feature learning with transformers and highlight promising directions for integrating dynamical systems theory into time-series classification.

Dissecting Chronos: Sparse Autoencoders Reveal Causal Feature Hierarchies in Time Series Foundation Models

Time series foundation models (TSFMs) are increasingly deployed in high-stakes domains, yet their internal representations remain opaque. We present the first application of sparse autoencoders (SAEs) to a TSFM, training TopK SAEs on activations of Chronos-T5-Large (710M parameters) across six layers. Through 392 single-feature ablation experiments, we establish that every ablated feature produces a positive CRPS degradation, confirming causal relevance. Our analysis reveals a depth-dependent hierarchy: early encoder layers encode low-level frequency features, the mid-encoder concentrates causally critical change-detection features, and the final encoder compresses a rich but less causally important taxonomy of temporal concepts. The most critical features reside in the mid-encoder (max single-feature Delta CRPS = 38.61), not in the semantically richest final encoder layer, where progressive ablation paradoxically improves forecast quality. These findings demonstrate that mechanistic interpretability transfers effectively to TSFMs and that Chronos-T5 relies on abrupt-dynamics detection rather than periodic pattern recognition.

Ill-Conditioning in Dictionary-Based Dynamic-Equation Learning: A Systems Biology Case Study

Data-driven discovery of governing equations from time-series data provides a powerful framework for understanding complex biological systems. Library-based approaches that use sparse regression over candidate functions have shown considerable promise, but they face a critical challenge when candidate functions become strongly correlated: numerical ill-conditioning. Poor or restricted sampling, together with particular choices of candidate libraries, can produce strong multicollinearity and numerical instability. In such cases, measurement noise may lead to widely different recovered models, obscuring the true underlying dynamics and hindering accurate system identification. Although sparse regularization promotes parsimonious solutions and can partially mitigate conditioning issues, strong correlations may persist, regularization may bias the recovered models, and the regression problem may remain highly sensitive to small perturbations in the data. We present a systematic analysis of how ill-conditioning affects sparse identification of biological dynamics using benchmark models from systems biology. We show that combinations involving as few as two or three terms can already exhibit strong multicollinearity and extremely large condition numbers. We further show that orthogonal polynomial bases do not consistently resolve ill-conditioning and can perform worse than monomial libraries when the data distribution deviates from the weight function associated with the orthogonal basis. Finally, we demonstrate that when data are sampled from distributions aligned with the appropriate weight functions corresponding to the orthogonal basis, numerical conditioning improves, and orthogonal polynomial bases can yield improved model recovery accuracy across two baseline models.

Distributed Dynamic Invariant Causal Prediction in Environmental Time Series

The extraction of invariant causal relationships from time series data with environmental attributes is critical for robust decision-making in domains such as climate science and environmental monitoring. However, existing methods either emphasize dynamic causal analysis without leveraging environmental contexts or focus on static invariant causal inference, leaving a gap in distributed temporal settings. In this paper, we propose Distributed Dynamic Invariant Causal Prediction in Time-series (DisDy-ICPT), a novel framework that learns dynamic causal relationships over time while mitigating spatial confounding variables without requiring data communication. We theoretically prove that DisDy-ICPT recovers stable causal predictors within a bounded number of communication rounds under standard sampling assumptions. Empirical evaluations on synthetic benchmarks and environment-segmented real-world datasets show that DisDy-ICPT achieves superior predictive stability and accuracy compared to baseline methods A and B. Our approach offers promising applications in carbon monitoring and weather forecasting. Future work will extend DisDy-ICPT to online learning scenarios.

LaSTR: Language-Driven Time-Series Segment Retrieval

Effectively searching time-series data is essential for system analysis, but existing methods often require expert-designed similarity criteria or rely on global, series-level descriptions. We study language-driven segment retrieval: given a natural language query, the goal is to retrieve relevant local segments from large time-series repositories. We build large-scale segment--caption training data by applying TV2-based segmentation to LOTSA windows and generating segment descriptions with GPT-5.2, and then train a Conformer-based contrastive retriever in a shared text--time-series embedding space. On a held-out test split, we evaluate single-positive retrieval together with caption-side consistency (SBERT and VLM-as-a-judge) under multiple candidate pool sizes. Across all settings, LaSTR outperforms random and CLIP baselines, yielding improved ranking quality and stronger semantic agreement between retrieved segments and query intent.

GNNs for Time Series Anomaly Detection: An Open-Source Framework and a Critical Evaluation

There is growing interest in applying graph-based methods to Time Series Anomaly Detection (TSAD), particularly Graph Neural Networks (GNNs), as they naturally model dependencies among multivariate signals. GNNs are typically used as backbones in score-based TSAD pipelines, where anomalies are identified through reconstruction or prediction errors followed by thresholding. However, and despite promising results, the field still lacks standardized frameworks for evaluation and suffers from persistent issues with metric design and interpretation. We thus present an open-source framework for TSAD using GNNs, designed to support reproducible experimentation across datasets, graph structures, and evaluation strategies. Built with flexibility and extensibility in mind, the framework facilitates systematic comparisons between TSAD models and enables in-depth analysis of performance and interpretability. Using this tool, we evaluate several GNN-based architectures alongside baseline models across two real-world datasets with contrasting structural characteristics. Our results show that GNNs not only improve detection performance but also offer significant gains in interpretability, an especially valuable feature for practical diagnosis. We also find that attention-based GNNs offer robustness when graph structure is uncertain or inferred. In addition, we reflect on common evaluation practices in TSAD, showing how certain metrics and thresholding strategies can obscure meaningful comparisons. Overall, this work contributes both practical tools and critical insights to advance the development and evaluation of graph-based TSAD systems.

LLM-MLFFN: Multi-Level Autonomous Driving Behavior Feature Fusion via Large Language Model

Accurate classification of autonomous vehicle (AV) driving behaviors is critical for safety validation, performance diagnosis, and traffic integration analysis. However, existing approaches primarily rely on numerical time-series modeling and often lack semantic abstraction, limiting interpretability and robustness in complex traffic environments. This paper presents LLM-MLFFN, a novel large language model (LLM)-enhanced multi-level feature fusion network designed to address the complexities of multi-dimensional driving data. The proposed LLM-MLFFN framework integrates priors from largescale pre-trained models and employs a multi-level approach to enhance classification accuracy. LLM-MLFFN comprises three core components: (1) a multi-level feature extraction module that extracts statistical, behavioral, and dynamic features to capture the quantitative aspects of driving behaviors; (2) a semantic description module that leverages LLMs to transform raw data into high-level semantic features; and (3) a dual-channel multi-level feature fusion network that combines numerical and semantic features using weighted attention mechanisms to improve robustness and prediction accuracy. Evaluation on the Waymo open trajectory dataset demonstrates the superior performance of the proposed LLM-MLFFN, achieving a classification accuracy of over 94%, surpassing existing machine learning models. Ablation studies further validate the critical contributions of multi-level fusion, feature extraction strategies, and LLM-derived semantic reasoning. These results suggest that integrating structured feature modeling with language-driven semantic abstraction provides a principled and interpretable pathway for robust autonomous driving behavior classification.

Time Series Foundation Models as Strong Baselines in Transportation Forecasting: A Large-Scale Benchmark Analysis

Accurate forecasting of transportation dynamics is essential for urban mobility and infrastructure planning. Although recent work has achieved strong performance with deep learning models, these methods typically require dataset-specific training, architecture design and hyper-parameter tuning. This paper evaluates whether general-purpose time-series foundation models can serve as forecasters for transportation tasks by benchmarking the zero-shot performance of the state-of-the-art model, Chronos-2, across ten real-world datasets covering highway traffic volume and flow, urban traffic speed, bike-sharing demand, and electric vehicle charging station data. Under a consistent evaluation protocol, we find that, even without any task-specific fine-tuning, Chronos-2 delivers state-of-the-art or competitive accuracy across most datasets, frequently outperforming classical statistical baselines and specialized deep learning architectures, particularly at longer horizons. Beyond point forecasting, we evaluate its native probabilistic outputs using prediction-interval coverage and sharpness, demonstrating that Chronos-2 also provides useful uncertainty quantification without dataset-specific training. In general, this study supports the adoption of time-series foundation models as a key baseline for transportation forecasting research.

Amortized Predictability-aware Training Framework for Time Series Forecasting and Classification

Time series data are prone to noise in various domains, and training samples may contain low-predictability patterns that deviate from the normal data distribution, leading to training instability or convergence to poor local minima. Therefore, mitigating the adverse effects of low-predictability samples is crucial for time series analysis tasks such as time series forecasting (TSF) and time series classification (TSC). While many deep learning models have achieved promising performance, few consider how to identify and penalize low-predictability samples to improve model performance from the training perspective. To fill this gap, we propose a general Amortized Predictability-aware Training Framework (APTF) for both TSF and TSC. APTF introduces two key designs that enable the model to focus on high-predictability samples while still learning appropriately from low-predictability ones: (i) a Hierarchical Predictability-aware Loss (HPL) that dynamically identifies low-predictability samples and progressively expands their loss penalty as training evolves, and (ii) an amortization model that mitigates predictability estimation errors caused by model bias, further enhancing HPL's effectiveness. The code is available at https://github.com/Meteor-Stars/APTF.