Medical Imaging with Deep Learning: MIDL 2020 -- Short Paper Track

This compendium gathers all the accepted extended abstracts from the Third International Conference on Medical Imaging with Deep Learning (MIDL 2020), held in Montreal, Canada, 6-9 July 2020. Note that only accepted extended abstracts are listed here, the Proceedings of the MIDL 2020 Full Paper Track are published in the Proceedings of Machine Learning Research (PMLR).

Role-Wise Data Augmentation for Knowledge Distillation

Knowledge Distillation (KD) is a common method for transferring the ``knowledge'' learned by one machine learning model (the \textit{teacher}) into another model (the \textit{student}), where typically, the teacher has a greater capacity (e.g., more parameters or higher bit-widths). To our knowledge, existing methods overlook the fact that although the student absorbs extra knowledge from the teacher, both models share the same input data -- and this data is the only medium by which the teacher's knowledge can be demonstrated. Due to the difference in model capacities, the student may not benefit fully from the same data points on which the teacher is trained. On the other hand, a human teacher may demonstrate a piece of knowledge with individualized examples adapted to a particular student, for instance, in terms of her cultural background and interests. Inspired by this behavior, we design data augmentation agents with distinct roles to facilitate knowledge distillation. Our data augmentation agents generate distinct training data for the teacher and student, respectively. We find empirically that specially tailored data points enable the teacher's knowledge to be demonstrated more effectively to the student. We compare our approach with existing KD methods on training popular neural architectures and demonstrate that role-wise data augmentation improves the effectiveness of KD over strong prior approaches. The code for reproducing our results can be found at https://github.com/bigaidream-projects/role-kd

Navigation Agents for the Visually Impaired: A Sidewalk Simulator and Experiments

Millions of blind and visually-impaired (BVI) people navigate urban environments every day, using smartphones for high-level path-planning and white canes or guide dogs for local information. However, many BVI people still struggle to travel to new places. In our endeavor to create a navigation assistant for the BVI, we found that existing Reinforcement Learning (RL) environments were unsuitable for the task. This work introduces SEVN, a sidewalk simulation environment and a neural network-based approach to creating a navigation agent. SEVN contains panoramic images with labels for house numbers, doors, and street name signs, and formulations for several navigation tasks. We study the performance of an RL algorithm (PPO) in this setting. Our policy model fuses multi-modal observations in the form of variable resolution images, visible text, and simulated GPS data to navigate to a goal door. We hope that this dataset, simulator, and experimental results will provide a foundation for further research into the creation of agents that can assist members of the BVI community with outdoor navigation.

Learning Neural Causal Models from Unknown Interventions

Meta-learning over a set of distributions can be interpreted as learning different types of parameters corresponding to short-term vs long-term aspects of the mechanisms underlying the generation of data. These are respectively captured by quickly-changing parameters and slowly-changing meta-parameters. We present a new framework for meta-learning causal models where the relationship between each variable and its parents is modeled by a neural network, modulated by structural meta-parameters which capture the overall topology of a directed graphical model. Our approach avoids a discrete search over models in favour of a continuous optimization procedure. We study a setting where interventional distributions are induced as a result of a random intervention on a single unknown variable of an unknown ground truth causal model, and the observations arising after such an intervention constitute one meta-example. To disentangle the slow-changing aspects of each conditional from the fast-changing adaptations to each intervention, we parametrize the neural network into fast parameters and slow meta-parameters. We introduce a meta-learning objective that favours solutions robust to frequent but sparse interventional distribution change, and which generalize well to previously unseen interventions. Optimizing this objective is shown experimentally to recover the structure of the causal graph.

An Empirical Study of Batch Normalization and Group Normalization in Conditional Computation

Batch normalization has been widely used to improve optimization in deep neural networks. While the uncertainty in batch statistics can act as a regularizer, using these dataset statistics specific to the training set impairs generalization in certain tasks. Recently, alternative methods for normalizing feature activations in neural networks have been proposed. Among them, group normalization has been shown to yield similar, in some domains even superior performance to batch normalization. All these methods utilize a learned affine transformation after the normalization operation to increase representational power. Methods used in conditional computation define the parameters of these transformations as learnable functions of conditioning information. In this work, we study whether and where the conditional formulation of group normalization can improve generalization compared to conditional batch normalization. We evaluate performances on the tasks of visual question answering, few-shot learning, and conditional image generation.

Revision in Continuous Space: Fine-Grained Control of Text Style Transfer

Typical methods for unsupervised text style transfer often rely on two key ingredients: 1) seeking for the disentanglement of the content and the attributes, and 2) troublesome adversarial learning. In this paper, we show that neither of these components is indispensable. We propose a new framework without them and instead consists of three key components: a variational auto-encoder (VAE), some attribute predictors (one for each attribute), and a content predictor. The VAE and the two types of predictors enable us to perform gradient-based optimization in the continuous space, which is mapped from sentences in a discrete space, to find the representation of a target sentence with the desired attributes and preserved content. Moreover, the proposed method can, for the first time, simultaneously manipulate multiple fine-grained attributes, such as sentence length and the presence of specific words, in synergy when performing text style transfer tasks. Extensive experimental studies on three popular text style transfer tasks show that the proposed method significantly outperforms five state-of-the-art methods.

Towards Standardization of Data Licenses: The Montreal Data License

This paper provides a taxonomy for the licensing of data in the fields of artificial intelligence and machine learning. The paper's goal is to build towards a common framework for data licensing akin to the licensing of open source software. Increased transparency and resolving conceptual ambiguities in existing licensing language are two noted benefits of the approach proposed in the paper. In parallel, such benefits may help foster fairer and more efficient markets for data through bringing about clearer tools and concepts that better define how data can be used in the fields of AI and ML. The paper's approach is summarized in a new family of data license language - \textit{the Montreal Data License (MDL)}. Alongside this new license, the authors and their collaborators have developed a web-based tool to generate license language espousing the taxonomies articulated in this paper.

The Liver Tumor Segmentation Benchmark (LiTS)

In this work, we report the set-up and results of the Liver Tumor Segmentation Benchmark (LITS) organized in conjunction with the IEEE International Symposium on Biomedical Imaging (ISBI) 2016 and International Conference On Medical Image Computing Computer Assisted Intervention (MICCAI) 2017. Twenty four valid state-of-the-art liver and liver tumor segmentation algorithms were applied to a set of 131 computed tomography (CT) volumes with different types of tumor contrast levels (hyper-/hypo-intense), abnormalities in tissues (metastasectomie) size and varying amount of lesions. The submitted algorithms have been tested on 70 undisclosed volumes. The dataset is created in collaboration with seven hospitals and research institutions and manually reviewed by independent three radiologists. We found that not a single algorithm performed best for liver and tumors. The best liver segmentation algorithm achieved a Dice score of 0.96(MICCAI) whereas for tumor segmentation the best algorithm evaluated at 0.67(ISBI) and 0.70(MICCAI). The LITS image data and manual annotations continue to be publicly available through an online evaluation system as an ongoing benchmarking resource.

Towards Deep Conversational Recommendations

There has been growing interest in using neural networks and deep learning techniques to create dialogue systems. Conversational recommendation is an interesting setting for the scientific exploration of dialogue with natural language as the associated discourse involves goal-driven dialogue that often transforms naturally into more free-form chat. This paper provides two contributions. First, until now there has been no publicly available large-scale dataset consisting of real-world dialogues centered around recommendations. To address this issue and to facilitate our exploration here, we have collected ReDial, a dataset consisting of over 10,000 conversations centered around the theme of providing movie recommendations. We make this data available to the community for further research. Second, we use this dataset to explore multiple facets of conversational recommendations. In particular we explore new neural architectures, mechanisms, and methods suitable for composing conversational recommendation systems. Our dataset allows us to systematically probe model sub-components addressing different parts of the overall problem domain ranging from: sentiment analysis and cold-start recommendation generation to detailed aspects of how natural language is used in this setting in the real world. We combine such sub-components into a full-blown dialogue system and examine its behavior.