Can Foundation Models Really Segment Tumors? A Benchmarking Odyssey in Lung CT Imaging

Accurate lung tumor segmentation is crucial for improving diagnosis, treatment planning, and patient outcomes in oncology. However, the complexity of tumor morphology, size, and location poses significant challenges for automated segmentation. This study presents a comprehensive benchmarking analysis of deep learning-based segmentation models, comparing traditional architectures such as U-Net and DeepLabV3, self-configuring models like nnUNet, and foundation models like MedSAM, and MedSAM~2. Evaluating performance across two lung tumor segmentation datasets, we assess segmentation accuracy and computational efficiency under various learning paradigms, including few-shot learning and fine-tuning. The results reveal that while traditional models struggle with tumor delineation, foundation models, particularly MedSAM~2, outperform them in both accuracy and computational efficiency. These findings underscore the potential of foundation models for lung tumor segmentation, highlighting their applicability in improving clinical workflows and patient outcomes.

DeepAndes: A Self-Supervised Vision Foundation Model for Multi-Spectral Remote Sensing Imagery of the Andes

By mapping sites at large scales using remotely sensed data, archaeologists can generate unique insights into long-term demographic trends, inter-regional social networks, and past adaptations to climate change. Remote sensing surveys complement field-based approaches, and their reach can be especially great when combined with deep learning and computer vision techniques. However, conventional supervised deep learning methods face challenges in annotating fine-grained archaeological features at scale. While recent vision foundation models have shown remarkable success in learning large-scale remote sensing data with minimal annotations, most off-the-shelf solutions are designed for RGB images rather than multi-spectral satellite imagery, such as the 8-band data used in our study. In this paper, we introduce DeepAndes, a transformer-based vision foundation model trained on three million multi-spectral satellite images, specifically tailored for Andean archaeology. DeepAndes incorporates a customized DINOv2 self-supervised learning algorithm optimized for 8-band multi-spectral imagery, marking the first foundation model designed explicitly for the Andes region. We evaluate its image understanding performance through imbalanced image classification, image instance retrieval, and pixel-level semantic segmentation tasks. Our experiments show that DeepAndes achieves superior F1 scores, mean average precision, and Dice scores in few-shot learning scenarios, significantly outperforming models trained from scratch or pre-trained on smaller datasets. This underscores the effectiveness of large-scale self-supervised pre-training in archaeological remote sensing. Codes will be available on https://github.com/geopacha/DeepAndes.

Automated Measurement of Eczema Severity with Self-Supervised Learning

Automated diagnosis of eczema using images acquired from digital camera can enable individuals to self-monitor their recovery. The process entails first segmenting out the eczema region from the image and then measuring the severity of eczema in the segmented region. The state-of-the-art methods for automated eczema diagnosis rely on deep neural networks such as convolutional neural network (CNN) and have shown impressive performance in accurately measuring the severity of eczema. However, these methods require massive volume of annotated data to train which can be hard to obtain. In this paper, we propose a self-supervised learning framework for automated eczema diagnosis under limited training data regime. Our framework consists of two stages: i) Segmentation, where we use an in-context learning based algorithm called SegGPT for few-shot segmentation of eczema region from the image; ii) Feature extraction and classification, where we extract DINO features from the segmented regions and feed it to a multi-layered perceptron (MLP) for 4-class classification of eczema severity. When evaluated on a dataset of annotated "in-the-wild" eczema images, we show that our method outperforms (Weighted F1: 0.67 $\pm$ 0.01) the state-of-the-art deep learning methods such as finetuned Resnet-18 (Weighted F1: 0.44 $\pm$ 0.16) and Vision Transformer (Weighted F1: 0.40 $\pm$ 0.22). Our results show that self-supervised learning can be a viable solution for automated skin diagnosis where labeled data is scarce.

DINOv2-powered Few-Shot Semantic Segmentation: A Unified Framework via Cross-Model Distillation and 4D Correlation Mining

Few-shot semantic segmentation has gained increasing interest due to its generalization capability, i.e., segmenting pixels of novel classes requiring only a few annotated images. Prior work has focused on meta-learning for support-query matching, with extensive development in both prototype-based and aggregation-based methods. To address data scarcity, recent approaches have turned to foundation models to enhance representation transferability for novel class segmentation. Among them, a hybrid dual-modal framework including both DINOv2 and SAM has garnered attention due to their complementary capabilities. We wonder "can we build a unified model with knowledge from both foundation models?" To this end, we propose FS-DINO, with only DINOv2's encoder and a lightweight segmenter. The segmenter features a bottleneck adapter, a meta-visual prompt generator based on dense similarities and semantic embeddings, and a decoder. Through coarse-to-fine cross-model distillation, we effectively integrate SAM's knowledge into our lightweight segmenter, which can be further enhanced by 4D correlation mining on support-query pairs. Extensive experiments on COCO-20i, PASCAL-5i, and FSS-1000 demonstrate the effectiveness and superiority of our method.

TSAL: Few-shot Text Segmentation Based on Attribute Learning

Recently supervised learning rapidly develops in scene text segmentation. However, the lack of high-quality datasets and the high cost of pixel annotation greatly limit the development of them. Considering the well-performed few-shot learning methods for downstream tasks, we investigate the application of the few-shot learning method to scene text segmentation. We propose TSAL, which leverages CLIP's prior knowledge to learn text attributes for segmentation. To fully utilize the semantic and texture information in the image, a visual-guided branch is proposed to separately extract text and background features. To reduce data dependency and improve text detection accuracy, the adaptive prompt-guided branch employs effective adaptive prompt templates to capture various text attributes. To enable adaptive prompts capture distinctive text features and complex background distribution, we propose Adaptive Feature Alignment module(AFA). By aligning learnable tokens of different attributes with visual features and prompt prototypes, AFA enables adaptive prompts to capture both general and distinctive attribute information. TSAL can capture the unique attributes of text and achieve precise segmentation using only few images. Experiments demonstrate that our method achieves SOTA performance on multiple text segmentation datasets under few-shot settings and show great potential in text-related domains.

DC-SAM: In-Context Segment Anything in Images and Videos via Dual Consistency

Given a single labeled example, in-context segmentation aims to segment corresponding objects. This setting, known as one-shot segmentation in few-shot learning, explores the segmentation model's generalization ability and has been applied to various vision tasks, including scene understanding and image/video editing. While recent Segment Anything Models have achieved state-of-the-art results in interactive segmentation, these approaches are not directly applicable to in-context segmentation. In this work, we propose the Dual Consistency SAM (DC-SAM) method based on prompt-tuning to adapt SAM and SAM2 for in-context segmentation of both images and videos. Our key insights are to enhance the features of the SAM's prompt encoder in segmentation by providing high-quality visual prompts. When generating a mask prior, we fuse the SAM features to better align the prompt encoder. Then, we design a cycle-consistent cross-attention on fused features and initial visual prompts. Next, a dual-branch design is provided by using the discriminative positive and negative prompts in the prompt encoder. Furthermore, we design a simple mask-tube training strategy to adopt our proposed dual consistency method into the mask tube. Although the proposed DC-SAM is primarily designed for images, it can be seamlessly extended to the video domain with the support of SAM2. Given the absence of in-context segmentation in the video domain, we manually curate and construct the first benchmark from existing video segmentation datasets, named In-Context Video Object Segmentation (IC-VOS), to better assess the in-context capability of the model. Extensive experiments demonstrate that our method achieves 55.5 (+1.4) mIoU on COCO-20i, 73.0 (+1.1) mIoU on PASCAL-5i, and a J&F score of 71.52 on the proposed IC-VOS benchmark. Our source code and benchmark are available at https://github.com/zaplm/DC-SAM.

MARS: a Multimodal Alignment and Ranking System for Few-Shot Segmentation

Current Few Shot Segmentation literature lacks a mask selection method that goes beyond visual similarity between the query and example images, leading to suboptimal predictions. We present MARS, a plug-and-play ranking system that leverages multimodal cues to filter and merge mask proposals robustly. Starting from a set of mask predictions for a single query image, we score, filter, and merge them to improve results. Proposals are evaluated using multimodal scores computed at local and global levels. Extensive experiments on COCO-20i, Pascal-5i, LVIS-92i, and FSS-1000 demonstrate that integrating all four scoring components is crucial for robust ranking, validating our contribution. As MARS can be effortlessly integrated with various mask proposal systems, we deploy it across a wide range of top-performer methods and achieve new state-of-the-art results on multiple existing benchmarks. Code will be available upon acceptance.

FSSUWNet: Mitigating the Fragility of Pre-trained Models with Feature Enhancement for Few-Shot Semantic Segmentation in Underwater Images

Few-Shot Semantic Segmentation (FSS), which focuses on segmenting new classes in images using only a limited number of annotated examples, has recently progressed in data-scarce domains. However, in this work, we show that the existing FSS methods often struggle to generalize to underwater environments. Specifically, the prior features extracted by pre-trained models used as feature extractors are fragile due to the unique challenges of underwater images. To address this, we propose FSSUWNet, a tailored FSS framework for underwater images with feature enhancement. FSSUWNet exploits the integration of complementary features, emphasizing both low-level and high-level image characteristics. In addition to employing a pre-trained model as the primary encoder, we propose an auxiliary encoder called Feature Enhanced Encoder which extracts complementary features to better adapt to underwater scene characteristics. Furthermore, a simple and effective Feature Alignment Module aims to provide global prior knowledge and align low-level features with high-level features in dimensions. Given the scarcity of underwater images, we introduce a cross-validation dataset version based on the Segmentation of Underwater Imagery dataset. Extensive experiments on public underwater segmentation datasets demonstrate that our approach achieves state-of-the-art performance. For example, our method outperforms the previous best method by 2.8% and 2.6% in terms of the mean Intersection over Union metric for 1-shot and 5-shot scenarios in the datasets, respectively. Our implementation is available at https://github.com/lizhh268/FSSUWNet.

CMaP-SAM: Contraction Mapping Prior for SAM-driven Few-shot Segmentation

Few-shot segmentation (FSS) aims to segment new classes using few annotated images. While recent FSS methods have shown considerable improvements by leveraging Segment Anything Model (SAM), they face two critical limitations: insufficient utilization of structural correlations in query images, and significant information loss when converting continuous position priors to discrete point prompts. To address these challenges, we propose CMaP-SAM, a novel framework that introduces contraction mapping theory to optimize position priors for SAM-driven few-shot segmentation. CMaP-SAM consists of three key components: (1) a contraction mapping module that formulates position prior optimization as a Banach contraction mapping with convergence guarantees. This module iteratively refines position priors through pixel-wise structural similarity, generating a converged prior that preserves both semantic guidance from reference images and structural correlations in query images; (2) an adaptive distribution alignment module bridging continuous priors with SAM's binary mask prompt encoder; and (3) a foreground-background decoupled refinement architecture producing accurate final segmentation masks. Extensive experiments demonstrate CMaP-SAM's effectiveness, achieving state-of-the-art performance with 71.1 mIoU on PASCAL-$5^i$ and 56.1 on COCO-$20^i$ datasets.

AdaViT: Adaptive Vision Transformer for Flexible Pretrain and Finetune with Variable 3D Medical Image Modalities

Pretrain techniques, whether supervised or self-supervised, are widely used in deep learning to enhance model performance. In real-world clinical scenarios, different sets of magnetic resonance (MR) contrasts are often acquired for different subjects/cases, creating challenges for deep learning models assuming consistent input modalities among all the cases and between pretrain and finetune. Existing methods struggle to maintain performance when there is an input modality/contrast set mismatch with the pretrained model, often resulting in degraded accuracy. We propose an adaptive Vision Transformer (AdaViT) framework capable of handling variable set of input modalities for each case. We utilize a dynamic tokenizer to encode different input image modalities to tokens and take advantage of the characteristics of the transformer to build attention mechanism across variable length of tokens. Through extensive experiments, we demonstrate that this architecture effectively transfers supervised pretrained models to new datasets with different input modality/contrast sets, resulting in superior performance on zero-shot testing, few-shot finetuning, and backward transferring in brain infarct and brain tumor segmentation tasks. Additionally, for self-supervised pretrain, the proposed method is able to maximize the pretrain data and facilitate transferring to diverse downstream tasks with variable sets of input modalities.