Coarse-to-Fine Joint Registration of MR and Ultrasound Images via Imaging Style Transfer

We developed a pipeline for registering pre-surgery Magnetic Resonance (MR) images and post-resection Ultrasound (US) images. Our approach leverages unpaired style transfer using 3D CycleGAN to generate synthetic T1 images, thereby enhancing registration performance. Additionally, our registration process employs both affine and local deformable transformations for a coarse-to-fine registration. The results demonstrate that our approach improves the consistency between MR and US image pairs in most cases.

DDTracking: A Deep Generative Framework for Diffusion MRI Tractography with Streamline Local-Global Spatiotemporal Modeling

This paper presents DDTracking, a novel deep generative framework for diffusion MRI tractography that formulates streamline propagation as a conditional denoising diffusion process. In DDTracking, we introduce a dual-pathway encoding network that jointly models local spatial encoding (capturing fine-scale structural details at each streamline point) and global temporal dependencies (ensuring long-range consistency across the entire streamline). Furthermore, we design a conditional diffusion model module, which leverages the learned local and global embeddings to predict streamline propagation orientations for tractography in an end-to-end trainable manner. We conduct a comprehensive evaluation across diverse, independently acquired dMRI datasets, including both synthetic and clinical data. Experiments on two well-established benchmarks with ground truth (ISMRM Challenge and TractoInferno) demonstrate that DDTracking largely outperforms current state-of-the-art tractography methods. Furthermore, our results highlight DDTracking's strong generalizability across heterogeneous datasets, spanning varying health conditions, age groups, imaging protocols, and scanner types. Collectively, DDTracking offers anatomically plausible and robust tractography, presenting a scalable, adaptable, and end-to-end learnable solution for broad dMRI applications. Code is available at: https://github.com/yishengpoxiao/DDtracking.git

DeSocial: Blockchain-based Decentralized Social Networks

Web 2.0 social platforms are inherently centralized, with user data and algorithmic decisions controlled by the platform. However, users can only passively receive social predictions without being able to choose the underlying algorithm, which limits personalization. Fortunately, with the emergence of blockchain, users are allowed to choose algorithms that are tailored to their local situation, improving prediction results in a personalized way. In a blockchain environment, each user possesses its own model to perform the social prediction, capturing different perspectives on social interactions. In our work, we propose DeSocial, a decentralized social network learning framework deployed on an Ethereum (ETH) local development chain that integrates distributed data storage, node-level consensus, and user-driven model selection through Ganache. In the first stage, each user leverages DeSocial to evaluate multiple backbone models on their local subgraph. DeSocial coordinates the execution and returns model-wise prediction results, enabling the user to select the most suitable backbone for personalized social prediction. Then, DeSocial uniformly selects several validation nodes that possess the algorithm specified by each user, and aggregates the prediction results by majority voting, to prevent errors caused by any single model's misjudgment. Extensive experiments show that DeSocial has an evident improvement compared to the five classical centralized social network learning models, promoting user empowerment in blockchain-based decentralized social networks, showing the importance of multi-node validation and personalized algorithm selection based on blockchain. Our implementation is available at: https://github.com/agiresearch/DeSocial.

LiteCUA: Computer as MCP Server for Computer-Use Agent on AIOS

We present AIOS 1.0, a novel platform designed to advance computer-use agent (CUA) capabilities through environmental contextualization. While existing approaches primarily focus on building more powerful agent frameworks or enhancing agent models, we identify a fundamental limitation: the semantic disconnect between how language models understand the world and how computer interfaces are structured. AIOS 1.0 addresses this challenge by transforming computers into contextual environments that language models can natively comprehend, implementing a Model Context Protocol (MCP) server architecture to abstract computer states and actions. This approach effectively decouples interface complexity from decision complexity, enabling agents to reason more effectively about computing environments. To demonstrate our platform's effectiveness, we introduce LiteCUA, a lightweight computer-use agent built on AIOS 1.0 that achieves a 14.66% success rate on the OSWorld benchmark, outperforming several specialized agent frameworks despite its simple architecture. Our results suggest that contextualizing computer environments for language models represents a promising direction for developing more capable computer-use agents and advancing toward AI that can interact with digital systems. The source code of LiteCUA is available at https://github.com/agiresearch/LiteCUA, and it is also integrated into the AIOS main branch as part of AIOS at https://github.com/agiresearch/AIOS.

ANNs-SaDE: A Machine-Learning-Based Design Automation Framework for Microwave Branch-Line Couplers

The traditional method for designing branch-line couplers involves a trial-and-error optimization process that requires multiple design iterations through electromagnetic (EM) simulations. Thus, it is extremely time consuming and labor intensive. In this paper, a novel machine-learning-based framework is proposed to tackle this issue. It integrates artificial neural networks with a self-adaptive differential evolution algorithm (ANNs-SaDE). This framework enables the self-adaptive design of various types of microwave branch-line couplers by precisely optimizing essential electrical properties, such as coupling factor, isolation, and phase difference between output ports. The effectiveness of the ANNs-SaDE framework is demonstrated by the designs of folded single-stage branch-line couplers and multi-stage wideband branch-line couplers.

LLM as GNN: Graph Vocabulary Learning for Text-Attributed Graph Foundation Models

Text-Attributed Graphs (TAGs), where each node is associated with text descriptions, are ubiquitous in real-world scenarios. They typically exhibit distinctive structure and domain-specific knowledge, motivating the development of a Graph Foundation Model (GFM) that generalizes across diverse graphs and tasks. Despite large efforts to integrate Large Language Models (LLMs) and Graph Neural Networks (GNNs) for TAGs, existing approaches suffer from decoupled architectures with two-stage alignment, limiting their synergistic potential. Even worse, existing methods assign out-of-vocabulary (OOV) tokens to graph nodes, leading to graph-specific semantics, token explosion, and incompatibility with task-oriented prompt templates, which hinders cross-graph and cross-task transferability. To address these challenges, we propose PromptGFM, a versatile GFM for TAGs grounded in graph vocabulary learning. PromptGFM comprises two key components: (1) Graph Understanding Module, which explicitly prompts LLMs to replicate the finest GNN workflow within the text space, facilitating seamless GNN-LLM integration and elegant graph-text alignment; (2) Graph Inference Module, which establishes a language-based graph vocabulary ensuring expressiveness, transferability, and scalability, enabling readable instructions for LLM fine-tuning. Extensive experiments demonstrate our superiority and transferability across diverse graphs and tasks. The code is available at this: https://github.com/agiresearch/PromptGFM.

InstructAgent: Building User Controllable Recommender via LLM Agent

Traditional recommender systems usually take the user-platform paradigm, where users are directly exposed under the control of the platform's recommendation algorithms. However, the defect of recommendation algorithms may put users in very vulnerable positions under this paradigm. First, many sophisticated models are often designed with commercial objectives in mind, focusing on the platform's benefits, which may hinder their ability to protect and capture users' true interests. Second, these models are typically optimized using data from all users, which may overlook individual user's preferences. Due to these shortcomings, users may experience several disadvantages under the traditional user-platform direct exposure paradigm, such as lack of control over the recommender system, potential manipulation by the platform, echo chamber effects, or lack of personalization for less active users due to the dominance of active users during collaborative learning. Therefore, there is an urgent need to develop a new paradigm to protect user interests and alleviate these issues. Recently, some researchers have introduced LLM agents to simulate user behaviors, these approaches primarily aim to optimize platform-side performance, leaving core issues in recommender systems unresolved. To address these limitations, we propose a new user-agent-platform paradigm, where agent serves as the protective shield between user and recommender system that enables indirect exposure. To this end, we first construct four recommendation datasets, denoted as $\dataset$, along with user instructions for each record.

When Diffusion MRI Meets Diffusion Model: A Novel Deep Generative Model for Diffusion MRI Generation

Diffusion MRI (dMRI) is an advanced imaging technique characterizing tissue microstructure and white matter structural connectivity of the human brain. The demand for high-quality dMRI data is growing, driven by the need for better resolution and improved tissue contrast. However, acquiring high-quality dMRI data is expensive and time-consuming. In this context, deep generative modeling emerges as a promising solution to enhance image quality while minimizing acquisition costs and scanning time. In this study, we propose a novel generative approach to perform dMRI generation using deep diffusion models. It can generate high dimension (4D) and high resolution data preserving the gradients information and brain structure. We demonstrated our method through an image mapping task aimed at enhancing the quality of dMRI images from 3T to 7T. Our approach demonstrates highly enhanced performance in generating dMRI images when compared to the current state-of-the-art (SOTA) methods. This achievement underscores a substantial progression in enhancing dMRI quality, highlighting the potential of our novel generative approach to revolutionize dMRI imaging standards.

When Box Meets Graph Neural Network in Tag-aware Recommendation

Last year has witnessed the re-flourishment of tag-aware recommender systems supported by the LLM-enriched tags. Unfortunately, though large efforts have been made, current solutions may fail to describe the diversity and uncertainty inherent in user preferences with only tag-driven profiles. Recently, with the development of geometry-based techniques, e.g., box embedding, diversity of user preferences now could be fully modeled as the range within a box in high dimension space. However, defect still exists as these approaches are incapable of capturing high-order neighbor signals, i.e., semantic-rich multi-hop relations within the user-tag-item tripartite graph, which severely limits the effectiveness of user modeling. To deal with this challenge, in this paper, we propose a novel algorithm, called BoxGNN, to perform the message aggregation via combination of logical operations, thereby incorporating high-order signals. Specifically, we first embed users, items, and tags as hyper-boxes rather than simple points in the representation space, and define two logical operations to facilitate the subsequent process. Next, we perform the message aggregation mechanism via the combination of logical operations, to obtain the corresponding high-order box representations. Finally, we adopt a volume-based learning objective with Gumbel smoothing techniques to refine the representation of boxes. Extensive experiments on two publicly available datasets and one LLM-enhanced e-commerce dataset have validated the superiority of BoxGNN compared with various state-of-the-art baselines. The code is released online

EMERGE: Integrating RAG for Improved Multimodal EHR Predictive Modeling

The integration of multimodal Electronic Health Records (EHR) data has notably advanced clinical predictive capabilities. However, current models that utilize clinical notes and multivariate time-series EHR data often lack the necessary medical context for precise clinical tasks. Previous methods using knowledge graphs (KGs) primarily focus on structured knowledge extraction. To address this, we propose EMERGE, a Retrieval-Augmented Generation (RAG) driven framework aimed at enhancing multimodal EHR predictive modeling. Our approach extracts entities from both time-series data and clinical notes by prompting Large Language Models (LLMs) and aligns them with professional PrimeKG to ensure consistency. Beyond triplet relationships, we include entities' definitions and descriptions to provide richer semantics. The extracted knowledge is then used to generate task-relevant summaries of patients' health statuses. These summaries are fused with other modalities utilizing an adaptive multimodal fusion network with cross-attention. Extensive experiments on the MIMIC-III and MIMIC-IV datasets for in-hospital mortality and 30-day readmission tasks demonstrate the superior performance of the EMERGE framework compared to baseline models. Comprehensive ablation studies and analyses underscore the efficacy of each designed module and the framework's robustness to data sparsity. EMERGE significantly enhances the use of multimodal EHR data in healthcare, bridging the gap with nuanced medical contexts crucial for informed clinical predictions.