Graph Prompting for Graph Learning Models: Recent Advances and Future Directions

Graph learning models have demonstrated great prowess in learning expressive representations from large-scale graph data in a wide variety of real-world scenarios. As a prevalent strategy for training powerful graph learning models, the "pre-training, adaptation" scheme first pre-trains graph learning models on unlabeled graph data in a self-supervised manner and then adapts them to specific downstream tasks. During the adaptation phase, graph prompting emerges as a promising approach that learns trainable prompts while keeping the pre-trained graph learning models unchanged. In this paper, we present a systematic review of recent advancements in graph prompting. First, we introduce representative graph pre-training methods that serve as the foundation step of graph prompting. Next, we review mainstream techniques in graph prompting and elaborate on how they design learnable prompts for graph prompting. Furthermore, we summarize the real-world applications of graph prompting from different domains. Finally, we discuss several open challenges in existing studies with promising future directions in this field.

Data Mixing Can Induce Phase Transitions in Knowledge Acquisition

Large Language Models (LLMs) are typically trained on data mixtures: most data come from web scrapes, while a small portion is curated from high-quality sources with dense domain-specific knowledge. In this paper, we show that when training LLMs on such data mixtures, knowledge acquisition from knowledge-dense datasets, unlike training exclusively on knowledge-dense data (arXiv:2404.05405), does not always follow a smooth scaling law but can exhibit phase transitions with respect to the mixing ratio and model size. Through controlled experiments on a synthetic biography dataset mixed with web-scraped data, we demonstrate that: (1) as we increase the model size to a critical value, the model suddenly transitions from memorizing very few to most of the biographies; (2) below a critical mixing ratio, the model memorizes almost nothing even with extensive training, but beyond this threshold, it rapidly memorizes more biographies. We attribute these phase transitions to a capacity allocation phenomenon: a model with bounded capacity must act like a knapsack problem solver to minimize the overall test loss, and the optimal allocation across datasets can change discontinuously as the model size or mixing ratio varies. We formalize this intuition in an information-theoretic framework and reveal that these phase transitions are predictable, with the critical mixing ratio following a power-law relationship with the model size. Our findings highlight a concrete case where a good mixing recipe for large models may not be optimal for small models, and vice versa.

Graph Foundation Models: A Comprehensive Survey

Graph-structured data pervades domains such as social networks, biological systems, knowledge graphs, and recommender systems. While foundation models have transformed natural language processing, vision, and multimodal learning through large-scale pretraining and generalization, extending these capabilities to graphs -- characterized by non-Euclidean structures and complex relational semantics -- poses unique challenges and opens new opportunities. To this end, Graph Foundation Models (GFMs) aim to bring scalable, general-purpose intelligence to structured data, enabling broad transfer across graph-centric tasks and domains. This survey provides a comprehensive overview of GFMs, unifying diverse efforts under a modular framework comprising three key components: backbone architectures, pretraining strategies, and adaptation mechanisms. We categorize GFMs by their generalization scope -- universal, task-specific, and domain-specific -- and review representative methods, key innovations, and theoretical insights within each category. Beyond methodology, we examine theoretical foundations including transferability and emergent capabilities, and highlight key challenges such as structural alignment, heterogeneity, scalability, and evaluation. Positioned at the intersection of graph learning and general-purpose AI, GFMs are poised to become foundational infrastructure for open-ended reasoning over structured data. This survey consolidates current progress and outlines future directions to guide research in this rapidly evolving field. Resources are available at https://github.com/Zehong-Wang/Awesome-Foundation-Models-on-Graphs.

Extracting Abstraction Dimensions by Identifying Syntax Pattern from Texts

This paper proposed an approach to automatically discovering subject dimension, action dimension, object dimension and adverbial dimension from texts to efficiently operate texts and support query in natural language. The high quality of trees guarantees that all subjects, actions, objects and adverbials and their subclass relations within texts can be represented. The independency of trees ensures that there is no redundant representation between trees. The expressiveness of trees ensures that the majority of sentences can be accessed from each tree and the rest of sentences can be accessed from at least one tree so that the tree-based search mechanism can support querying in natural language. Experiments show that the average precision, recall and F1-score of the abstraction trees constructed by the subclass relations of subject, action, object and adverbial are all greater than 80%. The application of the proposed approach to supporting query in natural language demonstrates that different types of question patterns for querying subject or object have high coverage of texts, and searching multiple trees on subject, action, object and adverbial according to the question pattern can quickly reduce search space to locate target sentences, which can support precise operation on texts.

MASS: Mathematical Data Selection via Skill Graphs for Pretraining Large Language Models

High-quality data plays a critical role in the pretraining and fine-tuning of large language models (LLMs), even determining their performance ceiling to some degree. Consequently, numerous data selection methods have been proposed to identify subsets of data that can effectively and efficiently enhance model performance. However, most of these methods focus on general data selection and tend to overlook the specific nuances of domain-related data. In this paper, we introduce MASS, a \textbf{MA}thematical data \textbf{S}election framework using the \textbf{S}kill graph for pretraining LLMs in the mathematical reasoning domain. By taking into account the unique characteristics of mathematics and reasoning, we construct a skill graph that captures the mathematical skills and their interrelations from a reference dataset. This skill graph guides us in assigning quality scores to the target dataset, enabling us to select the top-ranked subset which is further used to pretrain LLMs. Experimental results demonstrate the efficiency and effectiveness of MASS across different model sizes (1B and 7B) and pretraining datasets (web data and synthetic data). Specifically, in terms of efficiency, models trained on subsets selected by MASS can achieve similar performance to models trained on the original datasets, with a significant reduction in the number of trained tokens - ranging from 50\% to 70\% fewer tokens. In terms of effectiveness, when trained on the same amount of tokens, models trained on the data selected by MASS outperform those trained on the original datasets by 3.3\% to 5.9\%. These results underscore the potential of MASS to improve both the efficiency and effectiveness of pretraining LLMs.

EnigmaToM: Improve LLMs' Theory-of-Mind Reasoning Capabilities with Neural Knowledge Base of Entity States

Theory-of-Mind (ToM), the ability to infer others' perceptions and mental states, is fundamental to human interaction but remains a challenging task for Large Language Models (LLMs). While existing ToM reasoning methods show promise with reasoning via perceptual perspective-taking, they often rely excessively on LLMs, reducing their efficiency and limiting their applicability to high-order ToM reasoning, which requires multi-hop reasoning about characters' beliefs. To address these issues, we present EnigmaToM, a novel neuro-symbolic framework that enhances ToM reasoning by integrating a Neural Knowledge Base of entity states (Enigma) for (1) a psychology-inspired iterative masking mechanism that facilitates accurate perspective-taking and (2) knowledge injection that elicits key entity information. Enigma generates structured representations of entity states, which construct spatial scene graphs -- leveraging spatial information as an inductive bias -- for belief tracking of various ToM orders and enhancing events with fine-grained entity state details. Experimental results on multiple benchmarks, including ToMi, HiToM, and FANToM, show that EnigmaToM significantly improves ToM reasoning across LLMs of varying sizes, particularly excelling in high-order reasoning scenarios.

Two Heads Are Better Than One: Dual-Model Verbal Reflection at Inference-Time

Large Language Models (LLMs) often struggle with complex reasoning scenarios. While preference optimization methods enhance reasoning performance through training, they often lack transparency in why one reasoning outcome is preferred over another. Verbal reflection techniques improve explainability but are limited in LLMs' critique and refinement capacity. To address these challenges, we introduce a contrastive reflection synthesis pipeline that enhances the accuracy and depth of LLM-generated reflections. We further propose a dual-model reasoning framework within a verbal reinforcement learning paradigm, decoupling inference-time self-reflection into specialized, trained models for reasoning critique and refinement. Extensive experiments show that our framework outperforms traditional preference optimization methods across all evaluation metrics. Our findings also show that "two heads are better than one", demonstrating that a collaborative Reasoner-Critic model achieves superior reasoning performance and transparency, compared to single-model approaches.

Scalable Model Merging with Progressive Layer-wise Distillation

Model merging offers an effective way to integrate the capabilities of multiple fine-tuned models. However, the performance degradation of the merged model remains a challenge, particularly when none or few data are available. This paper first highlights the necessity of domain-specific data for model merging by proving that data-agnostic algorithms can have arbitrarily bad worst-case performance. Building on this theoretical insight, we explore the relationship between model merging and distillation, introducing a novel few-shot merging algorithm, ProDistill (Progressive Layer-wise Distillation). Unlike common belief that layer wise training hurts performance, we show that layer-wise teacher-student distillation not only enhances the scalability but also improves model merging performance. We conduct extensive experiments to show that compared to existing few-shot merging methods, ProDistill achieves state-of-the-art performance, with up to 6.14% and 6.61% improvements in vision and NLU tasks. Furthermore, we extend the experiments to models with over 10B parameters, showcasing the exceptional scalability of ProDistill.

RoleMRC: A Fine-Grained Composite Benchmark for Role-Playing and Instruction-Following

Role-playing is important for Large Language Models (LLMs) to follow diverse instructions while maintaining role identity and the role's pre-defined ability limits. Existing role-playing datasets mostly contribute to controlling role style and knowledge boundaries, but overlook role-playing in instruction-following scenarios. We introduce a fine-grained role-playing and instruction-following composite benchmark, named RoleMRC, including: (1) Multi-turn dialogues between ideal roles and humans, including free chats or discussions upon given passages; (2) Role-playing machine reading comprehension, involving response, refusal, and attempts according to passage answerability and role ability; (3) More complex scenarios with nested, multi-turn and prioritized instructions. The final RoleMRC features a 10.2k role profile meta-pool, 37.9k well-synthesized role-playing instructions, and 1.4k testing samples. We develop a pipeline to quantitatively evaluate the fine-grained role-playing and instruction-following capabilities of several mainstream LLMs, as well as models that are fine-tuned on our data. Moreover, cross-evaluation on external role-playing datasets confirms that models fine-tuned on RoleMRC enhances instruction-following without compromising general role-playing and reasoning capabilities. We also probe the neural-level activation maps of different capabilities over post-tuned LLMs. Access to our RoleMRC, RoleMRC-mix and Codes: https://github.com/LuJunru/RoleMRC.

An Automated Explainable Educational Assessment System Built on LLMs

In this demo, we present AERA Chat, an automated and explainable educational assessment system designed for interactive and visual evaluations of student responses. This system leverages large language models (LLMs) to generate automated marking and rationale explanations, addressing the challenge of limited explainability in automated educational assessment and the high costs associated with annotation. Our system allows users to input questions and student answers, providing educators and researchers with insights into assessment accuracy and the quality of LLM-assessed rationales. Additionally, it offers advanced visualization and robust evaluation tools, enhancing the usability for educational assessment and facilitating efficient rationale verification. Our demo video can be found at https://youtu.be/qUSjz-sxlBc.