Alternately Optimized Graph Neural Networks

Graph Neural Networks (GNNs) have demonstrated powerful representation capability in numerous graph-based tasks. Specifically, the decoupled structures of GNNs such as APPNP become popular due to their simplicity and performance advantages. However, the end-to-end training of these GNNs makes them inefficient in computation and memory consumption. In order to deal with these limitations, in this work, we propose an alternating optimization framework for graph neural networks that does not require end-to-end training. Extensive experiments under different settings demonstrate that the performance of the proposed algorithm is comparable to existing state-of-the-art algorithms but has significantly better computation and memory efficiency. Additionally, we show that our framework can be taken advantage to enhance existing decoupled GNNs.

Learning from the Tangram to Solve Mini Visual Tasks

Current pre-training methods in computer vision focus on natural images in the daily-life context. However, abstract diagrams such as icons and symbols are common and important in the real world. This work is inspired by Tangram, a game that requires replicating an abstract pattern from seven dissected shapes. By recording human experience in solving tangram puzzles, we present the Tangram dataset and show that a pre-trained neural model on the Tangram helps solve some mini visual tasks based on low-resolution vision. Extensive experiments demonstrate that our proposed method generates intelligent solutions for aesthetic tasks such as folding clothes and evaluating room layouts. The pre-trained feature extractor can facilitate the convergence of few-shot learning tasks on human handwriting and improve the accuracy in identifying icons by their contours. The Tangram dataset is available at https://github.com/yizhouzhao/Tangram.

Time Complexity Analysis of Evolutionary Algorithms for 2-Hop (1,2)-Minimum Spanning Tree Problem

The Minimum Spanning Tree problem (abbr. MSTP) is a well-known combinatorial optimization problem that has been extensively studied by the researchers in the field of evolutionary computing to theoretically analyze the optimization performance of evolutionary algorithms. Within the paper, we consider a constrained version of the problem named 2-Hop (1,2)-Minimum Spanning Tree problem (abbr. 2H-(1,2)-MSTP) in the context of evolutionary algorithms, which has been shown to be NP-hard. Following how evolutionary algorithms are applied to solve the MSTP, we first consider the evolutionary algorithms with search points in edge-based representation adapted to the 2H-(1,2)-MSTP (including the (1+1) EA, Global Simple Evolutionary Multi-Objective Optimizer and its two variants). More specifically, we separately investigate the upper bounds on their expected time (i.e., the expected number of fitness evaluations) to obtain a $\frac{3}{2}$-approximate solution with respect to different fitness functions. Inspired by the special structure of 2-hop spanning trees, we also consider the (1+1) EA with search points in vertex-based representation that seems not so natural for the problem and give an upper bound on its expected time to obtain a $\frac{3}{2}$-approximate solution, which is better than the above mentioned ones.

Cross-Site Severity Assessment of COVID-19 from CT Images via Domain Adaptation

Early and accurate severity assessment of Coronavirus disease 2019 (COVID-19) based on computed tomography (CT) images offers a great help to the estimation of intensive care unit event and the clinical decision of treatment planning. To augment the labeled data and improve the generalization ability of the classification model, it is necessary to aggregate data from multiple sites. This task faces several challenges including class imbalance between mild and severe infections, domain distribution discrepancy between sites, and presence of heterogeneous features. In this paper, we propose a novel domain adaptation (DA) method with two components to address these problems. The first component is a stochastic class-balanced boosting sampling strategy that overcomes the imbalanced learning problem and improves the classification performance on poorly-predicted classes. The second component is a representation learning that guarantees three properties: 1) domain-transferability by prototype triplet loss, 2) discriminant by conditional maximum mean discrepancy loss, and 3) completeness by multi-view reconstruction loss. Particularly, we propose a domain translator and align the heterogeneous data to the estimated class prototypes (i.e., class centers) in a hyper-sphere manifold. Experiments on cross-site severity assessment of COVID-19 from CT images show that the proposed method can effectively tackle the imbalanced learning problem and outperform recent DA approaches.

Transformer-based Machine Learning for Fast SAT Solvers and Logic Synthesis

CNF-based SAT and MaxSAT solvers are central to logic synthesis and verification systems. The increasing popularity of these constraint problems in electronic design automation encourages studies on different SAT problems and their properties for further computational efficiency. There has been both theoretical and practical success of modern Conflict-driven clause learning SAT solvers, which allows solving very large industrial instances in a relatively short amount of time. Recently, machine learning approaches provide a new dimension to solving this challenging problem. Neural symbolic models could serve as generic solvers that can be specialized for specific domains based on data without any changes to the structure of the model. In this work, we propose a one-shot model derived from the Transformer architecture to solve the MaxSAT problem, which is the optimization version of SAT where the goal is to satisfy the maximum number of clauses. Our model has a scale-free structure which could process varying size of instances. We use meta-path and self-attention mechanism to capture interactions among homogeneous nodes. We adopt cross-attention mechanisms on the bipartite graph to capture interactions among heterogeneous nodes. We further apply an iterative algorithm to our model to satisfy additional clauses, enabling a solution approaching that of an exact-SAT problem. The attention mechanisms leverage the parallelism for speedup. Our evaluation indicates improved speedup compared to heuristic approaches and improved completion rate compared to machine learning approaches.

STAR: Sparse Transformer-based Action Recognition

The cognitive system for human action and behavior has evolved into a deep learning regime, and especially the advent of Graph Convolution Networks has transformed the field in recent years. However, previous works have mainly focused on over-parameterized and complex models based on dense graph convolution networks, resulting in low efficiency in training and inference. Meanwhile, the Transformer architecture-based model has not yet been well explored for cognitive application in human action and behavior estimation. This work proposes a novel skeleton-based human action recognition model with sparse attention on the spatial dimension and segmented linear attention on the temporal dimension of data. Our model can also process the variable length of video clips grouped as a single batch. Experiments show that our model can achieve comparable performance while utilizing much less trainable parameters and achieve high speed in training and inference. Experiments show that our model achieves 4~18x speedup and 1/7~1/15 model size compared with the baseline models at competitive accuracy.

VersaGNN: a Versatile accelerator for Graph neural networks

\textit{Graph Neural Network} (GNN) is a promising approach for analyzing graph-structured data that tactfully captures their dependency information via node-level message passing. It has achieved state-of-the-art performances in many tasks, such as node classification, graph matching, clustering, and graph generation. As GNNs operate on non-Euclidean data, their irregular data access patterns cause considerable computational costs and overhead on conventional architectures, such as GPU and CPU. Our analysis shows that GNN adopts a hybrid computing model. The \textit{Aggregation} (or \textit{Message Passing}) phase performs vector additions where vectors are fetched with irregular strides. The \textit{Transformation} (or \textit{Node Embedding}) phase can be either dense or sparse-dense matrix multiplication. In this work, We propose \textit{VersaGNN}, an ultra-efficient, systolic-array-based versatile hardware accelerator that unifies dense and sparse matrix multiplication. By applying this single optimized systolic array to both aggregation and transformation phases, we have significantly reduced chip sizes and energy consumption. We then divide the computing engine into blocked systolic arrays to support the \textit{Strassen}'s algorithm for dense matrix multiplication, dramatically scaling down the number of multiplications and enabling high-throughput computation of GNNs. To balance the workload of sparse-dense matrix multiplication, we also introduced a greedy algorithm to combine sparse sub-matrices of compressed format into condensed ones to reduce computational cycles. Compared with current state-of-the-art GNN software frameworks, \textit{VersaGNN} achieves on average 3712$\times$ speedup with 1301.25$\times$ energy reduction on CPU, and 35.4$\times$ speedup with 17.66$\times$ energy reduction on GPU.

A novel multiple instance learning framework for COVID-19 severity assessment via data augmentation and self-supervised learning

How to fast and accurately assess the severity level of COVID-19 is an essential problem, when millions of people are suffering from the pandemic around the world. Currently, the chest CT is regarded as a popular and informative imaging tool for COVID-19 diagnosis. However, we observe that there are two issues -- weak annotation and insufficient data that may obstruct automatic COVID-19 severity assessment with CT images. To address these challenges, we propose a novel three-component method, i.e., 1) a deep multiple instance learning component with instance-level attention to jointly classify the bag and also weigh the instances, 2) a bag-level data augmentation component to generate virtual bags by reorganizing high confidential instances, and 3) a self-supervised pretext component to aid the learning process. We have systematically evaluated our method on the CT images of 229 COVID-19 cases, including 50 severe and 179 non-severe cases. Our method could obtain an average accuracy of 95.8%, with 93.6% sensitivity and 96.4% specificity, which outperformed previous works.

Structured Attention for Unsupervised Dialogue Structure Induction

Inducing a meaningful structural representation from one or a set of dialogues is a crucial but challenging task in computational linguistics. Advancement made in this area is critical for dialogue system design and discourse analysis. It can also be extended to solve grammatical inference. In this work, we propose to incorporate structured attention layers into a Variational Recurrent Neural Network (VRNN) model with discrete latent states to learn dialogue structure in an unsupervised fashion. Compared to a vanilla VRNN, structured attention enables a model to focus on different parts of the source sentence embeddings while enforcing a structural inductive bias. Experiments show that on two-party dialogue datasets, VRNN with structured attention learns semantic structures that are similar to templates used to generate this dialogue corpus. While on multi-party dialogue datasets, our model learns an interactive structure demonstrating its capability of distinguishing speakers or addresses, automatically disentangling dialogues without explicit human annotation.