Knowledge graph embedding is the process of learning low-dimensional representations of entities and relations in knowledge graphs.
Despite remarkable advances in natural language processing, developing effective systems for low-resource languages remains a formidable challenge, with performances typically lagging far behind high-resource counterparts due to data scarcity and insufficient linguistic resources. Cross-lingual knowledge transfer has emerged as a promising approach to address this challenge by leveraging resources from high-resource languages. In this paper, we investigate methods for transferring linguistic knowledge from high-resource languages to low-resource languages, where the number of labeled training instances is in hundreds. We focus on sentence-level and word-level tasks. We introduce a novel method, GETR (Graph-Enhanced Token Representation) for cross-lingual knowledge transfer along with two adopted baselines (a) augmentation in hidden layers and (b) token embedding transfer through token translation. Experimental results demonstrate that our GNN-based approach significantly outperforms existing multilingual and cross-lingual baseline methods, achieving 13 percentage point improvements on truly low-resource languages (Mizo, Khasi) for POS tagging, and 20 and 27 percentage point improvements in macro-F1 on simulated low-resource languages (Marathi, Bangla, Malayalam) across sentiment classification and NER tasks respectively. We also present a detailed analysis of the transfer mechanisms and identify key factors that contribute to successful knowledge transfer in this linguistic context.
Knowledge graphs (KGs) have become a key ingredient supporting a variety of applications. Beyond the traditional triplet representation of facts where a relation connects two entities, modern KGs observe an increasing number of hyper-relational facts, where an arbitrary number of qualifiers associated with a triplet provide auxiliary information to further describe the rich semantics of the triplet, which can effectively boost the reasoning performance in link prediction tasks. However, existing link prediction techniques over such hyper-relational KGs (HKGs) mostly focus on a transductive setting, where KG embedding models are learned from the specific vocabulary of a given KG and subsequently can only make predictions within the same vocabulary, limiting their generalizability to previously unseen vocabularies. Against this background, we propose THOR, an inducTive link prediction technique for Hyper-relational knOwledge gRaphs. Specifically, we first introduce both relation and entity foundation graphs, modeling their fundamental inter- and intra-fact interactions in HKGs, which are agnostic to any specific relations and entities. Afterward, THOR is designed to learn from the two foundation graphs with two parallel graph encoders followed by a transformer decoder, which supports efficient masked training and fully-inductive inference. We conduct a thorough evaluation of THOR in hyper-relational link prediction tasks on 12 datasets with different settings. Results show that THOR outperforms a sizable collection of baselines, yielding 66.1%, 55.9%, and 20.4% improvement over the best-performing rule-based, semi-inductive, and fully-inductive techniques, respectively. A series of ablation studies also reveals our key design factors capturing the structural invariance transferable across HKGs for inductive tasks.
Retrieval-augmented generation (RAG) promises grounded question answering, yet domain settings with multiple heterogeneous knowledge bases (KBs) remain challenging. In Chinese Tibetan medicine, encyclopedia entries are often dense and easy to match, which can dominate retrieval even when classics or clinical papers provide more authoritative evidence. We study a practical setting with three KBs (encyclopedia, classics, and clinical papers) and a 500-query benchmark (cutoff $K{=}5$) covering both single-KB and cross-KB questions. We propose two complementary methods to improve traceability, reduce hallucinations, and enable cross-KB verification. First, DAKS performs KB routing and budgeted retrieval to mitigate density-driven bias and to prioritize authoritative sources when appropriate. Second, we use an alignment graph to guide evidence fusion and coverage-aware packing, improving cross-KB evidence coverage without relying on naive concatenation. All answers are generated by a lightweight generator, \textsc{openPangu-Embedded-7B}. Experiments show consistent gains in routing quality and cross-KB evidence coverage, with the full system achieving the best CrossEv@5 while maintaining strong faithfulness and citation correctness.
Constructing domain-specific knowledge graphs from unstructured text remains challenging due to heterogeneous entity mentions, long-tail relation distributions, and the absence of standardized schemas. We present LEC-KG, a bidirectional collaborative framework that integrates the semantic understanding of Large Language Models (LLMs) with the structural reasoning of Knowledge Graph Embeddings (KGE). Our approach features three key components: (1) hierarchical coarse-to-fine relation extraction that mitigates long-tail bias, (2) evidence-guided Chain-of-Thought feedback that grounds structural suggestions in source text, and (3) semantic initialization that enables structural validation for unseen entities. The two modules enhance each other iteratively-KGE provides structure-aware feedback to refine LLM extractions, while validated triples progressively improve KGE representations. We evaluate LEC-KG on Chinese Sustainable Development Goal (SDG) reports, demonstrating substantial improvements over LLM baselines, particularly on low-frequency relations. Through iterative refinement, our framework reliably transforms unstructured policy text into validated knowledge graph triples.
We introduce ontology-to-tools compilation as a proof-of-principle mechanism for coupling large language models (LLMs) with formal domain knowledge. Within The World Avatar (TWA), ontological specifications are compiled into executable tool interfaces that LLM-based agents must use to create and modify knowledge graph instances, enforcing semantic constraints during generation rather than through post-hoc validation. Extending TWA's semantic agent composition framework, the Model Context Protocol (MCP) and associated agents are integral components of the knowledge graph ecosystem, enabling structured interaction between generative models, symbolic constraints, and external resources. An agent-based workflow translates ontologies into ontology-aware tools and iteratively applies them to extract, validate, and repair structured knowledge from unstructured scientific text. Using metal-organic polyhedra synthesis literature as an illustrative case, we show how executable ontological semantics can guide LLM behaviour and reduce manual schema and prompt engineering, establishing a general paradigm for embedding formal knowledge into generative systems.
Over the past years, embedding learning on networks has shown tremendous results in link prediction tasks for complex systems, with a wide range of real-life applications. Learning a representation for each node in a knowledge graph allows us to capture topological and semantic information, which can be processed in downstream analyses later. In the link prediction task, high-dimensional network information is encoded into low-dimensional vectors, which are then fed to a predictor to infer new connections between nodes in the network. As the network complexity (that is, the numbers of connections and types of interactions) grows, embedding learning turns out increasingly challenging. This review covers published models on embedding learning on multiplex networks for link prediction. First, we propose refined taxonomies to classify and compare models, depending on the type of embeddings and embedding techniques. Second, we review and address the problem of reproducible and fair evaluation of embedding learning on multiplex networks for the link prediction task. Finally, we tackle evaluation on directed multiplex networks by proposing a novel and fair testing procedure. This review constitutes a crucial step towards the development of more performant and tractable embedding learning approaches for multiplex networks and their fair evaluation for the link prediction task. We also suggest guidelines on the evaluation of models, and provide an informed perspective on the challenges and tools currently available to address downstream analyses applied to multiplex networks.
Semantic maps allow a robot to reason about its surroundings to fulfill tasks such as navigating known environments, finding specific objects, and exploring unmapped areas. Traditional mapping approaches provide accurate geometric representations but are often constrained by pre-designed symbolic vocabularies. The reliance on fixed object classes makes it impractical to handle out-of-distribution knowledge not defined at design time. Recent advances in Vision-Language Foundation Models, such as CLIP, enable open-set mapping, where objects are encoded as high-dimensional embeddings rather than fixed labels. In LIEREx, we integrate these VLFMs with established 3D Semantic Scene Graphs to enable target-directed exploration by an autonomous agent in partially unknown environments.
Answering first-order logic (FOL) queries over incomplete knowledge graphs (KGs) is difficult, especially for complex query structures that compose projection, intersection, union, and negation. We propose ROG, a retrieval-augmented framework that combines query-aware neighborhood retrieval with large language model (LLM) chain-of-thought reasoning. ROG decomposes a multi-operator query into a sequence of single-operator sub-queries and grounds each step in compact, query-relevant neighborhood evidence. Intermediate answer sets are cached and reused across steps, improving consistency on deep reasoning chains. This design reduces compounding errors and yields more robust inference on complex and negation-heavy queries. Overall, ROG provides a practical alternative to embedding-based logical reasoning by replacing learned operators with retrieval-grounded, step-wise inference. Experiments on standard KG reasoning benchmarks show consistent gains over strong embedding-based baselines, with the largest improvements on high-complexity and negation-heavy query types.
Network topology excels at structural predictions but fails to capture functional semantics encoded in biomedical literature. We present a retrieval-augmented generation (RAG) embedding framework that integrates graph neural network representations with dynamically retrieved literature-derived knowledge through contrastive learning. Benchmarking against ten embedding methods reveals task-specific complementarity: topology-focused methods achieve near-perfect link prediction (GCN: 0.983 AUROC), while RAG-GNN is the only method achieving positive silhouette scores for functional clustering (0.001 vs. negative scores for all baselines). Information-theoretic decomposition shows network topology contributes 77.3% of predictive information, while retrieved documents provide 8.6% unique information. Applied to cancer signaling networks (379 proteins, 3,498 interactions), the framework identifies DDR1 as a therapeutic target based on retrieved evidence of synthetic lethality with KRAS mutations. These results establish that topology-only and retrieval-augmented approaches serve complementary purposes: structural prediction tasks are solved by network topology alone, while functional interpretation uniquely benefits from retrieved knowledge.
Neural combinatorial optimization (NCO) solvers, implemented with graph neural networks (GNNs), have introduced new approaches for solving routing problems. Trained with reinforcement learning (RL), the state-of-the-art graph attention model (GAM) achieves near-optimal solutions without requiring expert knowledge or labeled data. In this work, we generalize the existing graph attention mechanism and propose the extended graph attention model (EGAM). Our model utilizes multi-head dot-product attention to update both node and edge embeddings, addressing the limitations of the conventional GAM, which considers only node features. We employ an autoregressive encoder-decoder architecture and train it with policy gradient algorithms that incorporate a specially designed baseline. Experiments show that EGAM matches or outperforms existing methods across various routing problems. Notably, the proposed model demonstrates exceptional performance on highly constrained problems, highlighting its efficiency in handling complex graph structures.