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Towards Expressive Graph Representation

Oct 12, 2020
Chengsheng Mao, Liang Yao, Yuan Luo


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A Comparison of Pre-trained Vision-and-Language Models for Multimodal Representation Learning across Medical Images and Reports

Sep 03, 2020
Yikuan Li, Hanyin Wang, Yuan Luo

* 10 pages, 3 figures, submitted to BIBM2020 

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Open-Set Recognition with Gaussian Mixture Variational Autoencoders

Jun 03, 2020
Alexander Cao, Yuan Luo, Diego Klabjan

* 12 pages including 8 figures and 4 tables, plus 6 pages of supplementary material 

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Med2Meta: Learning Representations of Medical Concepts with Meta-Embeddings

Jan 04, 2020
Shaika Chowdhury, Chenwei Zhang, Philip S. Yu, Yuan Luo

* HEALTHINF 2020 
* 9 pages 

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Conditional Hierarchical Bayesian Tucker Decomposition

Dec 12, 2019
Adam Sandler, Diego Klabjan, Yuan Luo

* 20 pages, added model evaluation and log-likelihood sections 

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Hierarchical Semantic Correspondence Learning for Post-Discharge Patient Mortality Prediction

Oct 15, 2019
Shaika Chowdhury, Chenwei Zhang, Philip S. Yu, Yuan Luo


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Mixed Pooling Multi-View Attention Autoencoder for Representation Learning in Healthcare

Oct 14, 2019
Shaika Chowdhury, Chenwei Zhang, Philip S. Yu, Yuan Luo


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KG-BERT: BERT for Knowledge Graph Completion

Sep 11, 2019
Liang Yao, Chengsheng Mao, Yuan Luo


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Mixture-based Multiple Imputation Model for Clinical Data with a Temporal Dimension

Aug 20, 2019
Ye Xue, Diego Klabjan, Yuan Luo


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Symmetric Cross Entropy for Robust Learning with Noisy Labels

Aug 16, 2019
Yisen Wang, Xingjun Ma, Zaiyi Chen, Yuan Luo, Jinfeng Yi, James Bailey

* ICCV2019 

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Mixture-based Multiple Imputation Models for Clinical Data with a Temporal Dimension

Aug 12, 2019
Ye Xue, Diego Klabjan, Yuan Luo


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Identification of Predictive Sub-Phenotypes of Acute Kidney Injury using Structured and Unstructured Electronic Health Record Data with Memory Networks

Apr 10, 2019
Zhenxing Xu, Jingyuan Chou, Xi Sheryl Zhang, Yuan Luo, Tamara Isakova, Prakash Adekkanattu, Jessica S. Ancker, Guoqian Jiang, Richard C. Kiefer, Jennifer A. Pacheco, Luke V. Rasmussen, Jyotishman Pathak, Fei Wang


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Evaluating the Portability of an NLP System for Processing Echocardiograms: A Retrospective, Multi-site Observational Study

Apr 02, 2019
Prakash Adekkanattu, Guoqian Jiang, Yuan Luo, Paul R. Kingsbury, Zhenxing Xu, Luke V. Rasmussen, Jennifer A. Pacheco, Richard C. Kiefer, Daniel J. Stone, Pascal S. Brandt, Liang Yao, Yizhen Zhong, Yu Deng, Fei Wang, Jessica S. Ancker, Thomas R. Campion, Jyotishman Pathak

* Under review with AMIA 2019 

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MedGCN: Graph Convolutional Networks for Multiple Medical Tasks

Mar 31, 2019
Chengsheng Mao, Liang Yao, Yuan Luo


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ImageGCN: Multi-Relational Image Graph Convolutional Networks for Disease Identification with Chest X-rays

Mar 31, 2019
Chengsheng Mao, Liang Yao, Yuan Luo


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Characterizing Design Patterns of EHR-Driven Phenotype Extraction Algorithms

Nov 15, 2018
Yizhen Zhong, Luke Rasmussen, Yu Deng, Jennifer Pacheco, Maureen Smith, Justin Starren, Wei-Qi Wei, Peter Speltz, Joshua Denny, Nephi Walton, George Hripcsak, Christopher G Chute, Yuan Luo

* 4 pages, accepted by IEEE BIBM 2018 as short paper 

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Implementing a Portable Clinical NLP System with a Common Data Model - a Lisp Perspective

Nov 15, 2018
Yuan Luo, Peter Szolovits

* 6 pages, accepted by IEEE BIBM 2018 as regular paper 

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Early Prediction of Acute Kidney Injury in Critical Care Setting Using Clinical Notes

Nov 09, 2018
Yikuan Li, Liang Yao, Chengsheng Mao, Anand Srivastava, Xiaoqian Jiang, Yuan Luo

* 4 pages, 3 figures, accepted by BIBM 2018 

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Graph Convolutional Networks for Text Classification

Oct 17, 2018
Liang Yao, Chengsheng Mao, Yuan Luo


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Supervised Nonnegative Matrix Factorization to Predict ICU Mortality Risk

Oct 09, 2018
Guoqing Chao, Chengsheng Mao, Fei Wang, Yuan Zhao, Yuan Luo

* 7 Pages, 2 figures 

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Deep Generative Classifiers for Thoracic Disease Diagnosis with Chest X-ray Images

Sep 20, 2018
Chengsheng Mao, Yiheng Pan, Zexian Zeng, Liang Yao, Yuan Luo


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Distribution Networks for Open Set Learning

Sep 20, 2018
Chengsheng Mao, Liang Yao, Yuan Luo


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Clinical Text Classification with Rule-based Features and Knowledge-guided Convolutional Neural Networks

Jul 20, 2018
Liang Yao, Chengsheng Mao, Yuan Luo

* arXiv admin note: text overlap with arXiv:1806.04820 by other authors 

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Developing a Portable Natural Language Processing Based Phenotyping System

Jul 17, 2018
Himanshu Sharma, Chengsheng Mao, Yizhen Zhang, Haleh Vatani, Liang Yao, Yizhen Zhong, Luke Rasmussen, Guoqian Jiang, Jyotishman Pathak, Yuan Luo

* 13 pages 

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Multi-View Graph Convolutional Network and Its Applications on Neuroimage Analysis for Parkinson's Disease

Jul 11, 2018
Xi Zhang, Lifang He, Kun Chen, Yuan Luo, Jiayu Zhou, Fei Wang


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Using Clinical Narratives and Structured Data to Identify Distant Recurrences in Breast Cancer

Jun 14, 2018
Zexian Zeng, Ankita Roy, Xiaoyu Li, Sasa Espino, Susan Clare, Seema Khan, Yuan Luo


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Natural Language Processing for EHR-Based Computational Phenotyping

Jun 14, 2018
Zexian Zeng, Yu Deng, Xiaoyu Li, Tristan Naumann, Yuan Luo


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