The Molecular Structure of Thought: Mapping the Topology of Long Chain-of-Thought Reasoning

Large language models (LLMs) often fail to learn effective long chain-of-thought (Long CoT) reasoning from human or non-Long-CoT LLMs imitation. To understand this, we propose that effective and learnable Long CoT trajectories feature stable molecular-like structures in unified view, which are formed by three interaction types: Deep-Reasoning (covalent-like), Self-Reflection (hydrogen-bond-like), and Self-Exploration (van der Waals-like). Analysis of distilled trajectories reveals these structures emerge from Long CoT fine-tuning, not keyword imitation. We introduce Effective Semantic Isomers and show that only bonds promoting fast entropy convergence support stable Long CoT learning, while structural competition impairs training. Drawing on these findings, we present Mole-Syn, a distribution-transfer-graph method that guides synthesis of effective Long CoT structures, boosting performance and RL stability across benchmarks.

AI Security Beyond Core Domains: Resume Screening as a Case Study of Adversarial Vulnerabilities in Specialized LLM Applications

Large Language Models (LLMs) excel at text comprehension and generation, making them ideal for automated tasks like code review and content moderation. However, our research identifies a vulnerability: LLMs can be manipulated by "adversarial instructions" hidden in input data, such as resumes or code, causing them to deviate from their intended task. Notably, while defenses may exist for mature domains such as code review, they are often absent in other common applications such as resume screening and peer review. This paper introduces a benchmark to assess this vulnerability in resume screening, revealing attack success rates exceeding 80% for certain attack types. We evaluate two defense mechanisms: prompt-based defenses achieve 10.1% attack reduction with 12.5% false rejection increase, while our proposed FIDS (Foreign Instruction Detection through Separation) using LoRA adaptation achieves 15.4% attack reduction with 10.4% false rejection increase. The combined approach provides 26.3% attack reduction, demonstrating that training-time defenses outperform inference-time mitigations in both security and utility preservation.

Seer Self-Consistency: Advance Budget Estimation for Adaptive Test-Time Scaling

Test-time scaling improves the inference performance of Large Language Models (LLMs) but also incurs substantial computational costs. Although recent studies have reduced token consumption through dynamic self-consistency, they remain constrained by the high latency of sequential requests. In this paper, we propose SeerSC, a dynamic self-consistency framework that simultaneously improves token efficiency and latency by integrating System 1 and System 2 reasoning. Specifically, we utilize the rapid System 1 to compute the answer entropy for given queries. This score is then used to evaluate the potential of samples for scaling, enabling dynamic self-consistency under System 2. Benefiting from the advance and accurate estimation provided by System 1, the proposed method can reduce token usage while simultaneously achieving a significant decrease in latency through parallel generation. It outperforms existing methods, achieving up to a 47% reduction in token consumption and a 43% reduction in inference latency without significant performance loss.

The Universal Landscape of Human Reasoning

Understanding how information is dynamically accumulated and transformed in human reasoning has long challenged cognitive psychology, philosophy, and artificial intelligence. Existing accounts, from classical logic to probabilistic models, illuminate aspects of output or individual modelling, but do not offer a unified, quantitative description of general human reasoning dynamics. To solve this, we introduce Information Flow Tracking (IF-Track), that uses large language models (LLMs) as probabilistic encoder to quantify information entropy and gain at each reasoning step. Through fine-grained analyses across diverse tasks, our method is the first successfully models the universal landscape of human reasoning behaviors within a single metric space. We show that IF-Track captures essential reasoning features, identifies systematic error patterns, and characterizes individual differences. Applied to discussion of advanced psychological theory, we first reconcile single- versus dual-process theories in IF-Track and discover the alignment of artificial and human cognition and how LLMs reshaping human reasoning process. This approach establishes a quantitative bridge between theory and measurement, offering mechanistic insights into the architecture of reasoning.

AutoPR: Let's Automate Your Academic Promotion!

As the volume of peer-reviewed research surges, scholars increasingly rely on social platforms for discovery, while authors invest considerable effort in promoting their work to ensure visibility and citations. To streamline this process and reduce the reliance on human effort, we introduce Automatic Promotion (AutoPR), a novel task that transforms research papers into accurate, engaging, and timely public content. To enable rigorous evaluation, we release PRBench, a multimodal benchmark that links 512 peer-reviewed articles to high-quality promotional posts, assessing systems along three axes: Fidelity (accuracy and tone), Engagement (audience targeting and appeal), and Alignment (timing and channel optimization). We also introduce PRAgent, a multi-agent framework that automates AutoPR in three stages: content extraction with multimodal preparation, collaborative synthesis for polished outputs, and platform-specific adaptation to optimize norms, tone, and tagging for maximum reach. When compared to direct LLM pipelines on PRBench, PRAgent demonstrates substantial improvements, including a 604% increase in total watch time, a 438% rise in likes, and at least a 2.9x boost in overall engagement. Ablation studies show that platform modeling and targeted promotion contribute the most to these gains. Our results position AutoPR as a tractable, measurable research problem and provide a roadmap for scalable, impactful automated scholarly communication.

Beyond Surface Reasoning: Unveiling the True Long Chain-of-Thought Capacity of Diffusion Large Language Models

Recently, Diffusion Large Language Models (DLLMs) have offered high throughput and effective sequential reasoning, making them a competitive alternative to autoregressive LLMs (ALLMs). However, parallel decoding, which enables simultaneous token updates, conflicts with the causal order often required for rigorous reasoning. We first identify this conflict as the core Parallel-Sequential Contradiction (PSC). Behavioral analyses in both simple and complex reasoning tasks show that DLLMs exhibit genuine parallelism only for directly decidable outputs. As task difficulty increases, they revert to autoregressive-like behavior, a limitation exacerbated by autoregressive prompting, which nearly doubles the number of decoding steps with remasking without improving quality. Moreover, PSC restricts DLLMs' self-reflection, reasoning depth, and exploratory breadth. To further characterize PSC, we introduce three scaling dimensions for DLLMs: parallel, diffusion, and sequential. Empirically, while parallel scaling yields consistent improvements, diffusion and sequential scaling are constrained by PSC. Based on these findings, we propose several practical mitigations, parallel-oriented prompting, diffusion early stopping, and parallel scaling, to reduce PSC-induced ineffectiveness and inefficiencies.

AI4Research: A Survey of Artificial Intelligence for Scientific Research

Recent advancements in artificial intelligence (AI), particularly in large language models (LLMs) such as OpenAI-o1 and DeepSeek-R1, have demonstrated remarkable capabilities in complex domains such as logical reasoning and experimental coding. Motivated by these advancements, numerous studies have explored the application of AI in the innovation process, particularly in the context of scientific research. These AI technologies primarily aim to develop systems that can autonomously conduct research processes across a wide range of scientific disciplines. Despite these significant strides, a comprehensive survey on AI for Research (AI4Research) remains absent, which hampers our understanding and impedes further development in this field. To address this gap, we present a comprehensive survey and offer a unified perspective on AI4Research. Specifically, the main contributions of our work are as follows: (1) Systematic taxonomy: We first introduce a systematic taxonomy to classify five mainstream tasks in AI4Research. (2) New frontiers: Then, we identify key research gaps and highlight promising future directions, focusing on the rigor and scalability of automated experiments, as well as the societal impact. (3) Abundant applications and resources: Finally, we compile a wealth of resources, including relevant multidisciplinary applications, data corpora, and tools. We hope our work will provide the research community with quick access to these resources and stimulate innovative breakthroughs in AI4Research.

Exploring and Exploiting the Inherent Efficiency within Large Reasoning Models for Self-Guided Efficiency Enhancement

Recent advancements in large reasoning models (LRMs) have significantly enhanced language models' capabilities in complex problem-solving by emulating human-like deliberative thinking. However, these models often exhibit overthinking (i.e., the generation of unnecessarily verbose and redundant content), which hinders efficiency and inflates inference cost. In this work, we explore the representational and behavioral origins of this inefficiency, revealing that LRMs inherently possess the capacity for more concise reasoning. Empirical analyses show that correct reasoning paths vary significantly in length, and the shortest correct responses often suffice, indicating untapped efficiency potential. Exploiting these findings, we propose two lightweight methods to enhance LRM efficiency. First, we introduce Efficiency Steering, a training-free activation steering technique that modulates reasoning behavior via a single direction in the model's representation space. Second, we develop Self-Rewarded Efficiency RL, a reinforcement learning framework that dynamically balances task accuracy and brevity by rewarding concise correct solutions. Extensive experiments on seven LRM backbones across multiple mathematical reasoning benchmarks demonstrate that our methods significantly reduce reasoning length while preserving or improving task performance. Our results highlight that reasoning efficiency can be improved by leveraging and guiding the intrinsic capabilities of existing models in a self-guided manner.

Manager: Aggregating Insights from Unimodal Experts in Two-Tower VLMs and MLLMs

Two-Tower Vision--Language Models (VLMs) have demonstrated strong performance across various downstream VL tasks. While BridgeTower further enhances performance by building bridges between encoders, it \textit{(i)} suffers from ineffective layer-by-layer utilization of unimodal representations, \textit{(ii)} restricts the flexible exploitation of different levels of unimodal semantic knowledge, and \textit{(iii)} is limited to the evaluation on traditional low-resolution datasets only with the Two-Tower VLM architecture. In this work, we propose Manager, a lightweight, efficient and effective plugin that adaptively aggregates insights from different levels of pre-trained unimodal experts to facilitate more comprehensive VL alignment and fusion. First, under the Two-Tower VLM architecture, we introduce ManagerTower, a novel VLM that introduces the manager in each cross-modal layer. Whether with or without VL pre-training, ManagerTower outperforms previous strong baselines and achieves superior performance on 4 downstream VL tasks. Moreover, we extend our exploration to the latest Multimodal Large Language Model (MLLM) architecture. We demonstrate that LLaVA-OV-Manager significantly boosts the zero-shot performance of LLaVA-OV across different categories of capabilities, images, and resolutions on 20 downstream datasets, whether the multi-grid algorithm is enabled or not. In-depth analysis reveals that both our manager and the multi-grid algorithm can be viewed as a plugin that improves the visual representation by capturing more diverse visual details from two orthogonal perspectives (depth and width). Their synergy can mitigate the semantic ambiguity caused by the multi-grid algorithm and further improve performance. Code and models are available at https://github.com/LooperXX/ManagerTower.

ClueAnchor: Clue-Anchored Knowledge Reasoning Exploration and Optimization for Retrieval-Augmented Generation

Retrieval-Augmented Generation (RAG) augments Large Language Models (LLMs) with external knowledge to improve factuality. However, existing RAG systems frequently underutilize the retrieved documents, failing to extract and integrate the key clues needed to support faithful and interpretable reasoning, especially in cases where relevant evidence is implicit, scattered, or obscured by noise. To address this issue, we propose ClueAnchor, a novel framework for enhancing RAG via clue-anchored reasoning exploration and optimization. ClueAnchor extracts key clues from retrieved content and generates multiple reasoning paths based on different knowledge configurations, optimizing the model by selecting the most effective one through reward-based preference optimization. Experiments show that ClueAnchor significantly outperforms prior RAG baselines in reasoning completeness and robustness. Further analysis confirms its strong resilience to noisy or partially relevant retrieved content, as well as its capability to identify supporting evidence even in the absence of explicit clue supervision during inference.