Smoothing the Landscape: Causal Structure Learning via Diffusion Denoising Objectives

Understanding causal dependencies in observational data is critical for informing decision-making. These relationships are often modeled as Bayesian Networks (BNs) and Directed Acyclic Graphs (DAGs). Existing methods, such as NOTEARS and DAG-GNN, often face issues with scalability and stability in high-dimensional data, especially when there is a feature-sample imbalance. Here, we show that the denoising score matching objective of diffusion models could smooth the gradients for faster, more stable convergence. We also propose an adaptive k-hop acyclicity constraint that improves runtime over existing solutions that require matrix inversion. We name this framework Denoising Diffusion Causal Discovery (DDCD). Unlike generative diffusion models, DDCD utilizes the reverse denoising process to infer a parameterized causal structure rather than to generate data. We demonstrate the competitive performance of DDCDs on synthetic benchmarking data. We also show that our methods are practically useful by conducting qualitative analyses on two real-world examples. Code is available at this url: https://github.com/haozhu233/ddcd.

Agent Q-Mix: Selecting the Right Action for LLM Multi-Agent Systems through Reinforcement Learning

Large Language Models (LLMs) have shown remarkable performance in completing various tasks. However, solving complex problems often requires the coordination of multiple agents, raising a fundamental question: how to effectively select and interconnect these agents. In this paper, we propose \textbf{Agent Q-Mix}, a reinforcement learning framework that reformulates topology selection as a cooperative Multi-Agent Reinforcement Learning (MARL) problem. Our method learns decentralized communication decisions using QMIX value factorization, where each agent selects from a set of communication actions that jointly induce a round-wise communication graph. At its core, Agent Q-Mix combines a topology-aware GNN encoder, GRU memory, and per-agent Q-heads under a Centralized Training with Decentralized Execution (CTDE) paradigm. The framework optimizes a reward function that balances task accuracy with token cost. Across seven core benchmarks in coding, reasoning, and mathematics, Agent Q-Mix achieves the highest average accuracy compared to existing methods while demonstrating superior token efficiency and robustness against agent failure. Notably, on the challenging Humanity's Last Exam (HLE) using Gemini-3.1-Flash-Lite as a backbone, Agent Q-Mix achieves 20.8\% accuracy, outperforming Microsoft Agent Framework (19.2\%) and LangGraph (19.2\%), followed by AutoGen and Lobster by OpenClaw. These results underscore the effectiveness of learned, decentralized topology optimization in pushing the boundaries of multi-agent reasoning.

A Cross-graph Tuning-free GNN Prompting Framework

GNN prompting aims to adapt models across tasks and graphs without requiring extensive retraining. However, most existing graph prompt methods still require task-specific parameter updates and face the issue of generalizing across graphs, limiting their performance and undermining the core promise of prompting. In this work, we introduce a Cross-graph Tuning-free Prompting Framework (CTP), which supports both homogeneous and heterogeneous graphs, can be directly deployed to unseen graphs without further parameter tuning, and thus enables a plug-and-play GNN inference engine. Extensive experiments on few-shot prediction tasks show that, compared to SOTAs, CTP achieves an average accuracy gain of 30.8% and a maximum gain of 54%, confirming its effectiveness and offering a new perspective on graph prompt learning.

Data-Model Co-Driven Continuous Channel Map Construction: A Perceptive Foundation for Embodied Intelligent Agents in 6G Networks

Future 6G networks will host massive numbers of embodied intelligent agents, which require real-time channel awareness over continuous-space for autonomous decision-making. By pre-obtaining location-specific channel state information (CSI), channel map can be served as a foundational world model for embodied intelligence to achieve wireless channel perception. However, acquiring CSI via measurements is costly, so in practice only sparse observations are available, leaving agents blind to channel conditions at unvisited locations. Meanwhile, purely model-driven channel maps can provide dense CSI but often yields unsatisfactory accuracy and robustness, while purely data-driven interpolation from sparse measurements is computationally prohibitive for real-time updates. To address these challenges, this paper proposes a data-model co-driven (DMcD) framework that performs a two-stage interpolation toward a space-time continuous channel map, First, a hybrid ray tracing and geometry-based channel model (H-RT/GBSM) is developed to capture dynamic scatterers, providing dense, time-variant channel properties that match measurement statistics as a physically consistent prior. Then, an inductive edge-conditioned graph neural network (InductE-GNN) fuses the prior with sparse measurements to perform real-time spatial interpolation, enabling rapid online adaptation without retraining, ensuring the synchronization with the dynamic physical reality. Evaluations with measured datasets show that the proposed DMcD framework significantly outperforms data-only and model-only baselines, providing accurate and queryable channel information for embodied intelligent agents.

EmbedPart: Embedding-Driven Graph Partitioning for Scalable Graph Neural Network Training

Graph Neural Networks (GNNs) are widely used for learning on graph-structured data, but scaling GNN training to massive graphs remains challenging. To enable scalable distributed training, graphs are divided into smaller partitions that are distributed across multiple machines such that inter-machine communication is minimized and computational load is balanced. In practice, existing partitioning approaches face a fundamental trade-off between partitioning overhead and partitioning quality. We propose EmbedPart, an embedding-driven partitioning approach that achieves both speed and quality. Instead of operating directly on irregular graph structures, EmbedPart leverages node embeddings produced during the actual GNN training workload and clusters these dense embeddings to derive a partitioning. EmbedPart achieves more than 100x speedup over Metis while maintaining competitive partitioning quality and accelerating distributed GNN training. Moreover, EmbedPart naturally supports graph updates and fast repartitioning, and can be applied to graph reordering to improve data locality and accelerate single-machine GNN training. By shifting partitioning from irregular graph structures to dense embeddings, EmbedPart enables scalable and high-quality graph data optimization.

From Physics to Surrogate Intelligence: A Unified Electro-Thermo-Optimization Framework for TSV Networks

High-density through-substrate vias (TSVs) enable 2.5D/3D heterogeneous integration but introduce significant signal-integrity and thermal-reliability challenges due to electrical coupling, insertion loss, and self-heating. Conventional full-wave finite-element method (FEM) simulations provide high accuracy but become computationally prohibitive for large design-space exploration. This work presents a scalable electro-thermal modeling and optimization framework that combines physics-informed analytical modeling, graph neural network (GNN) surrogates, and full-wave sign-off validation. A multi-conductor analytical model computes broadband S-parameters and effective anisotropic thermal conductivities of TSV arrays, achieving $5\%-10\%$ relative Frobenius error (RFE) across array sizes up to $15x15$. A physics-informed GNN surrogate (TSV-PhGNN), trained on analytical data and fine-tuned with HFSS simulations, generalizes to larger arrays with RFE below $2\%$ and nearly constant variance. The surrogate is integrated into a multi-objective Pareto optimization framework targeting reflection coefficient, insertion loss, worst-case crosstalk (NEXT/FEXT), and effective thermal conductivity. Millions of TSV configurations can be explored within minutes, enabling exhaustive layout and geometric optimization that would be infeasible using FEM alone. Final designs are validated with Ansys HFSS and Mechanical, showing strong agreement. The proposed framework enables rapid electro-thermal co-design of TSV arrays while reducing per-design evaluation time by more than six orders of magnitude.

Software Vulnerability Detection Using a Lightweight Graph Neural Network

Large Language Models (LLMs) have emerged as a popular choice in vulnerability detection studies given their foundational capabilities, open source availability, and variety of models, but have limited scalability due to extensive compute requirements. Using the natural graph relational structure of code, we show that our proposed graph neural network (GNN) based deep learning model VulGNN for vulnerability detection can achieve performance almost on par with LLMs, but is 100 times smaller in size and fast to retrain and customize. We describe the VulGNN architecture, ablation studies on components, learning rates, and generalizability to different code datasets. As a lightweight model for vulnerability analysis, VulGNN is efficient and deployable at the edge as part of real-world software development pipelines.

Speeding Up Mixed-Integer Programming Solvers with Sparse Learning for Branching

Machine learning is increasingly used to improve decisions within branch-and-bound algorithms for mixed-integer programming. Many existing approaches rely on deep learning, which often requires very large training datasets and substantial computational resources for both training and deployment, typically with GPU parallelization. In this work, we take a different path by developing interpretable models that are simple but effective. We focus on approximating strong branching (SB) scores, a highly effective yet computationally expensive branching rule. Using sparse learning methods, we build models with fewer than 4% of the parameters of a state-of-the-art graph neural network (GNN) while achieving competitive accuracy. Relative to SCIP's built-in branching rules and the GNN-based model, our CPU-only models are faster than the default solver and the GPU-accelerated GNN. The models are simple to train and deploy, and they remain effective with small training sets, which makes them practical in low-resource settings. Extensive experiments across diverse problem classes demonstrate the efficiency of this approach.

Disentangled Graph Prompting for Out-Of-Distribution Detection

When testing data and training data come from different distributions, deep neural networks (DNNs) will face significant safety risks in practical applications. Therefore, out-of-distribution (OOD) detection techniques, which can identify OOD samples at test time and alert the system, are urgently needed. Existing graph OOD detection methods usually characterize fine-grained in-distribution (ID) patterns from multiple perspectives, and train end-to-end graph neural networks (GNNs) for prediction. However, due to the unavailability of OOD data during training, the absence of explicit supervision signals could lead to sub-optimal performance of end-to-end encoders. To address this issue, we follow the pre-training+prompting paradigm to utilize pre-trained GNN encoders, and propose Disentangled Graph Prompting (DGP), to capture fine-grained ID patterns with the help of ID graph labels. Specifically, we design two prompt generators that respectively generate class-specific and class-agnostic prompt graphs by modifying the edge weights of an input graph. We also design several effective losses to train the prompt generators and prevent trivial solutions. We conduct extensive experiments on ten datasets to demonstrate the superiority of our proposed DGP, which achieves a relative AUC improvement of 3.63% over the best graph OOD detection baseline. Ablation studies and hyper-parameter experiments further show the effectiveness of DGP. Code is available at https://github.com/BUPT-GAMMA/DGP.

ORACAL: A Robust and Explainable Multimodal Framework for Smart Contract Vulnerability Detection with Causal Graph Enrichment

Although Graph Neural Networks (GNNs) have shown promise for smart contract vulnerability detection, they still face significant limitations. Homogeneous graph models fail to capture the interplay between control flow and data dependencies, while heterogeneous graph approaches often lack deep semantic understanding, leaving them susceptible to adversarial attacks. Moreover, most black-box models fail to provide explainable evidence, hindering trust in professional audits. To address these challenges, we propose ORACAL (Observable RAG-enhanced Analysis with CausAL reasoning), a heterogeneous multimodal graph learning framework that integrates Control Flow Graph (CFG), Data Flow Graph (DFG), and Call Graph (CG). ORACAL selectively enriches critical subgraphs with expert-level security context from Retrieval-Augmented Generation (RAG) and Large Language Models (LLMs), and employs a causal attention mechanism to disentangle true vulnerability indicators from spurious correlations. For transparency, the framework adopts PGExplainer to generate subgraph-level explanations identifying vulnerability triggering paths. Experiments on large-scale datasets demonstrate that ORACAL achieves state-of-the-art performance, outperforming MANDO-HGT, MTVHunter, GNN-SC, and SCVHunter by up to 39.6 percentage points, with a peak Macro F1 of 91.28% on the primary benchmark. ORACAL maintains strong generalization on out-of-distribution datasets with 91.8% on CGT Weakness and 77.1% on DAppScan. In explainability evaluation, PGExplainer achieves 32.51% Mean Intersection over Union (MIoU) against manually annotated vulnerability triggering paths. Under adversarial attacks, ORACAL limits performance degradation to approximately 2.35% F1 decrease with an Attack Success Rate (ASR) of only 3%, surpassing SCVHunter and MANDO-HGT which exhibit ASRs ranging from 10.91% to 18.73%.