Chain of Functions: A Programmatic Pipeline for Fine-Grained Chart Reasoning Data

Visual reasoning is crucial for multimodal large language models (MLLMs) to address complex chart queries, yet high-quality rationale data remains scarce. Existing methods leveraged (M)LLMs for data generation, but direct prompting often yields limited precision and diversity. In this paper, we propose \textit{Chain of Functions (CoF)}, a novel programmatic reasoning data generation pipeline that utilizes freely-explored reasoning paths as supervision to ensure data precision and diversity. Specifically, it starts with human-free exploration among the atomic functions (e.g., maximum data and arithmetic operations) to generate diverse function chains, which are then translated into linguistic rationales and questions with only a moderate open-sourced LLM. \textit{CoF} provides multiple benefits: 1) Precision: function-governed generation reduces hallucinations compared to freeform generation; 2) Diversity: enumerating function chains enables varied question taxonomies; 3) Explainability: function chains serve as built-in rationales, allowing fine-grained evaluation beyond overall accuracy; 4) Practicality: eliminating reliance on extremely large models. Employing \textit{CoF}, we construct the \textit{ChartCoF} dataset, with 1.4k complex reasoning Q\&A for fine-grained analysis and 50k Q\&A for reasoning enhancement. The fine-grained evaluation on \textit{ChartCoF} reveals varying performance across question taxonomies for each MLLM, and the experiments also show that finetuning with \textit{ChartCoF} achieves state-of-the-art performance among same-scale MLLMs on widely used benchmarks. Furthermore, the novel paradigm of function-governed rationale generation in \textit{CoF} could inspire broader applications beyond charts.

Interpretable High-order Knowledge Graph Neural Network for Predicting Synthetic Lethality in Human Cancers

Synthetic lethality (SL) is a promising gene interaction for cancer therapy. Recent SL prediction methods integrate knowledge graphs (KGs) into graph neural networks (GNNs) and employ attention mechanisms to extract local subgraphs as explanations for target gene pairs. However, attention mechanisms often lack fidelity, typically generate a single explanation per gene pair, and fail to ensure trustworthy high-order structures in their explanations. To overcome these limitations, we propose Diverse Graph Information Bottleneck for Synthetic Lethality (DGIB4SL), a KG-based GNN that generates multiple faithful explanations for the same gene pair and effectively encodes high-order structures. Specifically, we introduce a novel DGIB objective, integrating a Determinant Point Process (DPP) constraint into the standard IB objective, and employ 13 motif-based adjacency matrices to capture high-order structures in gene representations. Experimental results show that DGIB4SL outperforms state-of-the-art baselines and provides multiple explanations for SL prediction, revealing diverse biological mechanisms underlying SL inference.

Time Series Domain Adaptation via Latent Invariant Causal Mechanism

Time series domain adaptation aims to transfer the complex temporal dependence from the labeled source domain to the unlabeled target domain. Recent advances leverage the stable causal mechanism over observed variables to model the domain-invariant temporal dependence. However, modeling precise causal structures in high-dimensional data, such as videos, remains challenging. Additionally, direct causal edges may not exist among observed variables (e.g., pixels). These limitations hinder the applicability of existing approaches to real-world scenarios. To address these challenges, we find that the high-dimension time series data are generated from the low-dimension latent variables, which motivates us to model the causal mechanisms of the temporal latent process. Based on this intuition, we propose a latent causal mechanism identification framework that guarantees the uniqueness of the reconstructed latent causal structures. Specifically, we first identify latent variables by utilizing sufficient changes in historical information. Moreover, by enforcing the sparsity of the relationships of latent variables, we can achieve identifiable latent causal structures. Built on the theoretical results, we develop the Latent Causality Alignment (LCA) model that leverages variational inference, which incorporates an intra-domain latent sparsity constraint for latent structure reconstruction and an inter-domain latent sparsity constraint for domain-invariant structure reconstruction. Experiment results on eight benchmarks show a general improvement in the domain-adaptive time series classification and forecasting tasks, highlighting the effectiveness of our method in real-world scenarios. Codes are available at https://github.com/DMIRLAB-Group/LCA.

Disentangling Long-Short Term State Under Unknown Interventions for Online Time Series Forecasting

Current methods for time series forecasting struggle in the online scenario, since it is difficult to preserve long-term dependency while adapting short-term changes when data are arriving sequentially. Although some recent methods solve this problem by controlling the updates of latent states, they cannot disentangle the long/short-term states, leading to the inability to effectively adapt to nonstationary. To tackle this challenge, we propose a general framework to disentangle long/short-term states for online time series forecasting. Our idea is inspired by the observations where short-term changes can be led by unknown interventions like abrupt policies in the stock market. Based on this insight, we formalize a data generation process with unknown interventions on short-term states. Under mild assumptions, we further leverage the independence of short-term states led by unknown interventions to establish the identification theory to achieve the disentanglement of long/short-term states. Built on this theory, we develop a long short-term disentanglement model (LSTD) to extract the long/short-term states with long/short-term encoders, respectively. Furthermore, the LSTD model incorporates a smooth constraint to preserve the long-term dependencies and an interrupted dependency constraint to enforce the forgetting of short-term dependencies, together boosting the disentanglement of long/short-term states. Experimental results on several benchmark datasets show that our \textbf{LSTD} model outperforms existing methods for online time series forecasting, validating its efficacy in real-world applications.

Controllable Video Generation with Provable Disentanglement

Controllable video generation remains a significant challenge, despite recent advances in generating high-quality and consistent videos. Most existing methods for controlling video generation treat the video as a whole, neglecting intricate fine-grained spatiotemporal relationships, which limits both control precision and efficiency. In this paper, we propose Controllable Video Generative Adversarial Networks (CoVoGAN) to disentangle the video concepts, thus facilitating efficient and independent control over individual concepts. Specifically, following the minimal change principle, we first disentangle static and dynamic latent variables. We then leverage the sufficient change property to achieve component-wise identifiability of dynamic latent variables, enabling independent control over motion and identity. To establish the theoretical foundation, we provide a rigorous analysis demonstrating the identifiability of our approach. Building on these theoretical insights, we design a Temporal Transition Module to disentangle latent dynamics. To enforce the minimal change principle and sufficient change property, we minimize the dimensionality of latent dynamic variables and impose temporal conditional independence. To validate our approach, we integrate this module as a plug-in for GANs. Extensive qualitative and quantitative experiments on various video generation benchmarks demonstrate that our method significantly improves generation quality and controllability across diverse real-world scenarios.

Semantic Data Augmentation for Long-tailed Facial Expression Recognition

Facial Expression Recognition has a wide application prospect in social robotics, health care, driver fatigue monitoring, and many other practical scenarios. Automatic recognition of facial expressions has been extensively studied by the Computer Vision research society. But Facial Expression Recognition in real-world is still a challenging task, partially due to the long-tailed distribution of the dataset. Many recent studies use data augmentation for Long-Tailed Recognition tasks. In this paper, we propose a novel semantic augmentation method. By introducing randomness into the encoding of the source data in the latent space of VAE-GAN, new samples are generated. Then, for facial expression recognition in RAF-DB dataset, we use our augmentation method to balance the long-tailed distribution. Our method can be used in not only FER tasks, but also more diverse data-hungry scenarios.

Causal Representation Learning from Multimodal Biological Observations

Prevalent in biological applications (e.g., human phenotype measurements), multimodal datasets can provide valuable insights into the underlying biological mechanisms. However, current machine learning models designed to analyze such datasets still lack interpretability and theoretical guarantees, which are essential to biological applications. Recent advances in causal representation learning have shown promise in uncovering the interpretable latent causal variables with formal theoretical certificates. Unfortunately, existing works for multimodal distributions either rely on restrictive parametric assumptions or provide rather coarse identification results, limiting their applicability to biological research which favors a detailed understanding of the mechanisms. In this work, we aim to develop flexible identification conditions for multimodal data and principled methods to facilitate the understanding of biological datasets. Theoretically, we consider a flexible nonparametric latent distribution (c.f., parametric assumptions in prior work) permitting causal relationships across potentially different modalities. We establish identifiability guarantees for each latent component, extending the subspace identification results from prior work. Our key theoretical ingredient is the structural sparsity of the causal connections among distinct modalities, which, as we will discuss, is natural for a large collection of biological systems. Empirically, we propose a practical framework to instantiate our theoretical insights. We demonstrate the effectiveness of our approach through extensive experiments on both numerical and synthetic datasets. Results on a real-world human phenotype dataset are consistent with established medical research, validating our theoretical and methodological framework.

WirelessAgent: Large Language Model Agents for Intelligent Wireless Networks

Wireless networks are increasingly facing challenges due to their expanding scale and complexity. These challenges underscore the need for advanced AI-driven strategies, particularly in the upcoming 6G networks. In this article, we introduce WirelessAgent, a novel approach leveraging large language models (LLMs) to develop AI agents capable of managing complex tasks in wireless networks. It can effectively improve network performance through advanced reasoning, multimodal data processing, and autonomous decision making. Thereafter, we demonstrate the practical applicability and benefits of WirelessAgent for network slicing management. The experimental results show that WirelessAgent is capable of accurately understanding user intent, effectively allocating slice resources, and consistently maintaining optimal performance.

Causal Temporal Representation Learning with Nonstationary Sparse Transition

Causal Temporal Representation Learning (Ctrl) methods aim to identify the temporal causal dynamics of complex nonstationary temporal sequences. Despite the success of existing Ctrl methods, they require either directly observing the domain variables or assuming a Markov prior on them. Such requirements limit the application of these methods in real-world scenarios when we do not have such prior knowledge of the domain variables. To address this problem, this work adopts a sparse transition assumption, aligned with intuitive human understanding, and presents identifiability results from a theoretical perspective. In particular, we explore under what conditions on the significance of the variability of the transitions we can build a model to identify the distribution shifts. Based on the theoretical result, we introduce a novel framework, Causal Temporal Representation Learning with Nonstationary Sparse Transition (CtrlNS), designed to leverage the constraints on transition sparsity and conditional independence to reliably identify both distribution shifts and latent factors. Our experimental evaluations on synthetic and real-world datasets demonstrate significant improvements over existing baselines, highlighting the effectiveness of our approach.

Crystals with Transformers on Graphs, for Prediction of Unconventional Crystal Material Properties and the Benchmark

The ionic bonding across the lattice and ordered microscopic structures endow crystals with unique symmetry and determine their macroscopic properties. Unconventional crystals, in particular, exhibit non-traditional lattice structures or possess exotic physical properties, making them intriguing subjects for investigation. Therefore, to accurately predict the physical and chemical properties of crystals, it is crucial to consider long-range orders. While GNN excels at capturing the local environment of atoms in crystals, they often face challenges in effectively capturing longer-ranged interactions due to their limited depth. In this paper, we propose CrysToGraph ($\textbf{Crys}$tals with $\textbf{T}$ransformers $\textbf{o}$n $\textbf{Graph}$s), a novel transformer-based geometric graph network designed specifically for unconventional crystalline systems, and UnconvBench, a comprehensive benchmark to evaluate models' predictive performance on unconventional crystal materials such as defected crystals, low-dimension crystals and MOF. CrysToGraph effectively captures short-range interactions with transformer-based graph convolution blocks as well as long-range interactions with graph-wise transformer blocks. CrysToGraph proofs its effectiveness in modelling unconventional crystal materials in multiple tasks, and moreover, it outperforms most existing methods, achieving new state-of-the-art results on the benchmarks of both unconventional crystals and traditional crystals.