The state-of-the-art in Cardiac MRI Reconstruction: Results of the CMRxRecon Challenge in MICCAI 2023

Cardiac MRI, crucial for evaluating heart structure and function, faces limitations like slow imaging and motion artifacts. Undersampling reconstruction, especially data-driven algorithms, has emerged as a promising solution to accelerate scans and enhance imaging performance using highly under-sampled data. Nevertheless, the scarcity of publicly available cardiac k-space datasets and evaluation platform hinder the development of data-driven reconstruction algorithms. To address this issue, we organized the Cardiac MRI Reconstruction Challenge (CMRxRecon) in 2023, in collaboration with the 26th International Conference on MICCAI. CMRxRecon presented an extensive k-space dataset comprising cine and mapping raw data, accompanied by detailed annotations of cardiac anatomical structures. With overwhelming participation, the challenge attracted more than 285 teams and over 600 participants. Among them, 22 teams successfully submitted Docker containers for the testing phase, with 7 teams submitted for both cine and mapping tasks. All teams use deep learning based approaches, indicating that deep learning has predominately become a promising solution for the problem. The first-place winner of both tasks utilizes the E2E-VarNet architecture as backbones. In contrast, U-Net is still the most popular backbone for both multi-coil and single-coil reconstructions. This paper provides a comprehensive overview of the challenge design, presents a summary of the submitted results, reviews the employed methods, and offers an in-depth discussion that aims to inspire future advancements in cardiac MRI reconstruction models. The summary emphasizes the effective strategies observed in Cardiac MRI reconstruction, including backbone architecture, loss function, pre-processing techniques, physical modeling, and model complexity, thereby providing valuable insights for further developments in this field.

High-Discriminative Attribute Feature Learning for Generalized Zero-Shot Learning

Zero-shot learning(ZSL) aims to recognize new classes without prior exposure to their samples, relying on semantic knowledge from observed classes. However, current attention-based models may overlook the transferability of visual features and the distinctiveness of attribute localization when learning regional features in images. Additionally, they often overlook shared attributes among different objects. Highly discriminative attribute features are crucial for identifying and distinguishing unseen classes. To address these issues, we propose an innovative approach called High-Discriminative Attribute Feature Learning for Generalized Zero-Shot Learning (HDAFL). HDAFL optimizes visual features by learning attribute features to obtain discriminative visual embeddings. Specifically, HDAFL utilizes multiple convolutional kernels to automatically learn discriminative regions highly correlated with attributes in images, eliminating irrelevant interference in image features. Furthermore, we introduce a Transformer-based attribute discrimination encoder to enhance the discriminative capability among attributes. Simultaneously, the method employs contrastive loss to alleviate dataset biases and enhance the transferability of visual features, facilitating better semantic transfer between seen and unseen classes. Experimental results demonstrate the effectiveness of HDAFL across three widely used datasets.

AlphaCrystal-II: Distance matrix based crystal structure prediction using deep learning

Computational prediction of stable crystal structures has a profound impact on the large-scale discovery of novel functional materials. However, predicting the crystal structure solely from a material's composition or formula is a promising yet challenging task, as traditional ab initio crystal structure prediction (CSP) methods rely on time-consuming global searches and first-principles free energy calculations. Inspired by the recent success of deep learning approaches in protein structure prediction, which utilize pairwise amino acid interactions to describe 3D structures, we present AlphaCrystal-II, a novel knowledge-based solution that exploits the abundant inter-atomic interaction patterns found in existing known crystal structures. AlphaCrystal-II predicts the atomic distance matrix of a target crystal material and employs this matrix to reconstruct its 3D crystal structure. By leveraging the wealth of inter-atomic relationships of known crystal structures, our approach demonstrates remarkable effectiveness and reliability in structure prediction through comprehensive experiments. This work highlights the potential of data-driven methods in accelerating the discovery and design of new materials with tailored properties.

Super-Resolution of SOHO/MDI Magnetograms of Solar Active Regions Using SDO/HMI Data and an Attention-Aided Convolutional Neural Network

Image super-resolution has been an important subject in image processing and recognition. Here, we present an attention-aided convolutional neural network (CNN) for solar image super-resolution. Our method, named SolarCNN, aims to enhance the quality of line-of-sight (LOS) magnetograms of solar active regions (ARs) collected by the Michelson Doppler Imager (MDI) on board the Solar and Heliospheric Observatory (SOHO). The ground-truth labels used for training SolarCNN are the LOS magnetograms collected by the Helioseismic and Magnetic Imager (HMI) on board the Solar Dynamics Observatory (SDO). Solar ARs consist of strong magnetic fields in which magnetic energy can suddenly be released to produce extreme space weather events, such as solar flares, coronal mass ejections, and solar energetic particles. SOHO/MDI covers Solar Cycle 23, which is stronger with more eruptive events than Cycle 24. Enhanced SOHO/MDI magnetograms allow for better understanding and forecasting of violent events of space weather. Experimental results show that SolarCNN improves the quality of SOHO/MDI magnetograms in terms of the structural similarity index measure (SSIM), Pearson's correlation coefficient (PCC), and the peak signal-to-noise ratio (PSNR).

A Good Score Does not Lead to A Good Generative Model

Score-based Generative Models (SGMs) is one leading method in generative modeling, renowned for their ability to generate high-quality samples from complex, high-dimensional data distributions. The method enjoys empirical success and is supported by rigorous theoretical convergence properties. In particular, it has been shown that SGMs can generate samples from a distribution that is close to the ground-truth if the underlying score function is learned well, suggesting the success of SGM as a generative model. We provide a counter-example in this paper. Through the sample complexity argument, we provide one specific setting where the score function is learned well. Yet, SGMs in this setting can only output samples that are Gaussian blurring of training data points, mimicking the effects of kernel density estimation. The finding resonates a series of recent finding that reveal that SGMs can demonstrate strong memorization effect and fail to generate.

Estimating the time-evolving refractivity of a turbulent medium using optical beam measurements: a data assimilation approach

In applications such as free-space optical communication, a signal is often recovered after propagation through a turbulent medium. In this setting, it is common to assume that limited information is known about the turbulent medium, such as a space- and time-averaged statistic (e.g., root-mean-square), but without information about the state of the spatial variations. It could be helpful to gain more information if the state of the turbulent medium can be characterized with the spatial variations and evolution in time described. Here, we propose to investigate the use of data assimilation techniques for this purpose. A computational setting is used with the paraxial wave equation, and the extended Kalman filter is used to conduct data assimilation using intensity measurements. To reduce computational cost, the evolution of the turbulent medium is modeled as a stochastic process. Following some past studies, the process has only a small number of Fourier wavelengths for spatial variations. The results show that the spatial and temporal variations of the medium are recovered accurately in many cases. In some time windows in some cases, the error is larger for the recovery. Finally we discuss the potential use of the spatial variation information for aiding the recovery of the transmitted signal or beam source.

IEKM: A Model Incorporating External Keyword Matrices

A customer service platform system with a core text semantic similarity (STS) task faces two urgent challenges: Firstly, one platform system needs to adapt to different domains of customers, i.e., different domains adaptation (DDA). Secondly, it is difficult for the model of the platform system to distinguish sentence pairs that are literally close but semantically different, i.e., hard negative samples. In this paper, we propose an incorporation external keywords matrices model (IEKM) to address these challenges. The model uses external tools or dictionaries to construct external matrices and fuses them to the self-attention layers of the Transformer structure through gating units, thus enabling flexible corrections to the model results. We evaluate the method on multiple datasets and the results show that our method has improved performance on all datasets. To demonstrate that our method can effectively solve all the above challenges, we conduct a flexible correction experiment, which results in an increase in the F1 value from 56.61 to 73.53. Our code will be publicly available.

Accelerating optimization over the space of probability measures

Acceleration of gradient-based optimization methods is an issue of significant practical and theoretical interest, particularly in machine learning applications. Most research has focused on optimization over Euclidean spaces, but given the need to optimize over spaces of probability measures in many machine learning problems, it is of interest to investigate accelerated gradient methods in this context too. To this end, we introduce a Hamiltonian-flow approach that is analogous to moment-based approaches in Euclidean space. We demonstrate that algorithms based on this approach can achieve convergence rates of arbitrarily high order. Numerical examples illustrate our claim.