Learning on manifolds without manifold learning

Function approximation based on data drawn randomly from an unknown distribution is an important problem in machine learning. In contrast to the prevalent paradigm of solving this problem by minimizing a loss functional, we have given a direct one-shot construction together with optimal error bounds under the manifold assumption; i.e., one assumes that the data is sampled from an unknown sub-manifold of a high dimensional Euclidean space. A great deal of research deals with obtaining information about this manifold, such as the eigendecomposition of the Laplace-Beltrami operator or coordinate charts, and using this information for function approximation. This two step approach implies some extra errors in the approximation stemming from basic quantities of the data in addition to the errors inherent in function approximation. In Neural Networks, 132:253268, 2020, we have proposed a one-shot direct method to achieve function approximation without requiring the extraction of any information about the manifold other than its dimension. However, one cannot pin down the class of approximants used in that paper. In this paper, we view the unknown manifold as a sub-manifold of an ambient hypersphere and study the question of constructing a one-shot approximation using the spherical polynomials based on the hypersphere. Our approach does not require preprocessing of the data to obtain information about the manifold other than its dimension. We give optimal rates of approximation for relatively "rough" functions.

GIELLM: Japanese General Information Extraction Large Language Model Utilizing Mutual Reinforcement Effect

Information Extraction (IE) stands as a cornerstone in natural language processing, traditionally segmented into distinct sub-tasks. The advent of Large Language Models (LLMs) heralds a paradigm shift, suggesting the feasibility of a singular model addressing multiple IE subtasks. In this vein, we introduce the General Information Extraction Large Language Model (GIELLM), which integrates text Classification, Sentiment Analysis, Named Entity Recognition, Relation Extraction, and Event Extraction using a uniform input-output schema. This innovation marks the first instance of a model simultaneously handling such a diverse array of IE subtasks. Notably, the GIELLM leverages the Mutual Reinforcement Effect (MRE), enhancing performance in integrated tasks compared to their isolated counterparts. Our experiments demonstrate State-of-the-Art (SOTA) results in five out of six Japanese mixed datasets, significantly surpassing GPT-3.5-Turbo. Further, an independent evaluation using the novel Text Classification Relation and Event Extraction(TCREE) dataset corroborates the synergistic advantages of MRE in text and word classification. This breakthrough paves the way for most IE subtasks to be subsumed under a singular LLM framework. Specialized fine-tune task-specific models are no longer needed.

Self-Guided Robust Graph Structure Refinement

Recent studies have revealed that GNNs are vulnerable to adversarial attacks. To defend against such attacks, robust graph structure refinement (GSR) methods aim at minimizing the effect of adversarial edges based on node features, graph structure, or external information. However, we have discovered that existing GSR methods are limited by narrowassumptions, such as assuming clean node features, moderate structural attacks, and the availability of external clean graphs, resulting in the restricted applicability in real-world scenarios. In this paper, we propose a self-guided GSR framework (SG-GSR), which utilizes a clean sub-graph found within the given attacked graph itself. Furthermore, we propose a novel graph augmentation and a group-training strategy to handle the two technical challenges in the clean sub-graph extraction: 1) loss of structural information, and 2) imbalanced node degree distribution. Extensive experiments demonstrate the effectiveness of SG-GSR under various scenarios including non-targeted attacks, targeted attacks, feature attacks, e-commerce fraud, and noisy node labels. Our code is available at https://github.com/yeonjun-in/torch-SG-GSR.

InstructDoc: A Dataset for Zero-Shot Generalization of Visual Document Understanding with Instructions

We study the problem of completing various visual document understanding (VDU) tasks, e.g., question answering and information extraction, on real-world documents through human-written instructions. To this end, we propose InstructDoc, the first large-scale collection of 30 publicly available VDU datasets, each with diverse instructions in a unified format, which covers a wide range of 12 tasks and includes open document types/formats. Furthermore, to enhance the generalization performance on VDU tasks, we design a new instruction-based document reading and understanding model, InstructDr, that connects document images, image encoders, and large language models (LLMs) through a trainable bridging module. Experiments demonstrate that InstructDr can effectively adapt to new VDU datasets, tasks, and domains via given instructions and outperforms existing multimodal LLMs and ChatGPT without specific training.

YOLOv9: Learning What You Want to Learn Using Programmable Gradient Information

Today's deep learning methods focus on how to design the most appropriate objective functions so that the prediction results of the model can be closest to the ground truth. Meanwhile, an appropriate architecture that can facilitate acquisition of enough information for prediction has to be designed. Existing methods ignore a fact that when input data undergoes layer-by-layer feature extraction and spatial transformation, large amount of information will be lost. This paper will delve into the important issues of data loss when data is transmitted through deep networks, namely information bottleneck and reversible functions. We proposed the concept of programmable gradient information (PGI) to cope with the various changes required by deep networks to achieve multiple objectives. PGI can provide complete input information for the target task to calculate objective function, so that reliable gradient information can be obtained to update network weights. In addition, a new lightweight network architecture -- Generalized Efficient Layer Aggregation Network (GELAN), based on gradient path planning is designed. GELAN's architecture confirms that PGI has gained superior results on lightweight models. We verified the proposed GELAN and PGI on MS COCO dataset based object detection. The results show that GELAN only uses conventional convolution operators to achieve better parameter utilization than the state-of-the-art methods developed based on depth-wise convolution. PGI can be used for variety of models from lightweight to large. It can be used to obtain complete information, so that train-from-scratch models can achieve better results than state-of-the-art models pre-trained using large datasets, the comparison results are shown in Figure 1. The source codes are at: https://github.com/WongKinYiu/yolov9.

NanoNER: Named Entity Recognition for nanobiology using experts' knowledge and distant supervision

Here we present the training and evaluation of NanoNER, a Named Entity Recognition (NER) model for Nanobiology. NER consists in the identification of specific entities in spans of unstructured texts and is often a primary task in Natural Language Processing (NLP) and Information Extraction. The aim of our model is to recognise entities previously identified by domain experts as constituting the essential knowledge of the domain. Relying on ontologies, which provide us with a domain vocabulary and taxonomy, we implemented an iterative process enabling experts to determine the entities relevant to the domain at hand. We then delve into the potential of distant supervision learning in NER, supporting how this method can increase the quantity of annotated data with minimal additional manpower. On our full corpus of 728 full-text nanobiology articles, containing more than 120k entity occurrences, NanoNER obtained a F1-score of 0.98 on the recognition of previously known entities. Our model also demonstrated its ability to discover new entities in the text, with precision scores ranging from 0.77 to 0.81. Ablation experiments further confirmed this and allowed us to assess the dependency of our approach on the external resources. It highlighted the dependency of the approach to the resource, while also confirming its ability to rediscover up to 30% of the ablated terms. This paper details the methodology employed, experimental design, and key findings, providing valuable insights and directions for future related researches on NER in specialized domain. Furthermore, since our approach require minimal manpower , we believe that it can be generalized to other specialized fields.

Genie: Achieving Human Parity in Content-Grounded Datasets Generation

The lack of high-quality data for content-grounded generation tasks has been identified as a major obstacle to advancing these tasks. To address this gap, we propose Genie, a novel method for automatically generating high-quality content-grounded data. It consists of three stages: (a) Content Preparation, (b) Generation: creating task-specific examples from the content (e.g., question-answer pairs or summaries). (c) Filtering mechanism aiming to ensure the quality and faithfulness of the generated data. We showcase this methodology by generating three large-scale synthetic data, making wishes, for Long-Form Question-Answering (LFQA), summarization, and information extraction. In a human evaluation, our generated data was found to be natural and of high quality. Furthermore, we compare models trained on our data with models trained on human-written data -- ELI5 and ASQA for LFQA and CNN-DailyMail for Summarization. We show that our models are on par with or outperforming models trained on human-generated data and consistently outperforming them in faithfulness. Finally, we applied our method to create LFQA data within the medical domain and compared a model trained on it with models trained on other domains.

Instruct and Extract: Instruction Tuning for On-Demand Information Extraction

Large language models with instruction-following capabilities open the door to a wider group of users. However, when it comes to information extraction - a classic task in natural language processing - most task-specific systems cannot align well with long-tail ad hoc extraction use cases for non-expert users. To address this, we propose a novel paradigm, termed On-Demand Information Extraction, to fulfill the personalized demands of real-world users. Our task aims to follow the instructions to extract the desired content from the associated text and present it in a structured tabular format. The table headers can either be user-specified or inferred contextually by the model. To facilitate research in this emerging area, we present a benchmark named InstructIE, inclusive of both automatically generated training data, as well as the human-annotated test set. Building on InstructIE, we further develop an On-Demand Information Extractor, ODIE. Comprehensive evaluations on our benchmark reveal that ODIE substantially outperforms the existing open-source models of similar size. Our code and dataset are released on https://github.com/yzjiao/On-Demand-IE.

An Information Retrieval and Extraction Tool for Covid-19 Related Papers

Background: The COVID-19 pandemic has caused severe impacts on health systems worldwide. Its critical nature and the increased interest of individuals and organizations to develop countermeasures to the problem has led to a surge of new studies in scientific journals. Objetive: We sought to develop a tool that incorporates, in a novel way, aspects of Information Retrieval (IR) and Extraction (IE) applied to the COVID-19 Open Research Dataset (CORD-19). The main focus of this paper is to provide researchers with a better search tool for COVID-19 related papers, helping them find reference papers and hightlight relevant entities in text. Method: We applied Latent Dirichlet Allocation (LDA) to model, based on research aspects, the topics of all English abstracts in CORD-19. Relevant named entities of each abstract were extracted and linked to the corresponding UMLS concept. Regular expressions and the K-Nearest Neighbors algorithm were used to rank relevant papers. Results: Our tool has shown the potential to assist researchers by automating a topic-based search of CORD-19 papers. Nonetheless, we identified that more fine-tuned topic modeling parameters and increased accuracy of the research aspect classifier model could lead to a more accurate and reliable tool. Conclusion: We emphasize the need of new automated tools to help researchers find relevant COVID-19 documents, in addition to automatically extracting useful information contained in them. Our work suggests that combining different algorithms and models could lead to new ways of browsing COVID-19 paper data.

PolyIE: A Dataset of Information Extraction from Polymer Material Scientific Literature

Scientific information extraction (SciIE), which aims to automatically extract information from scientific literature, is becoming more important than ever. However, there are no existing SciIE datasets for polymer materials, which is an important class of materials used ubiquitously in our daily lives. To bridge this gap, we introduce POLYIE, a new SciIE dataset for polymer materials. POLYIE is curated from 146 full-length polymer scholarly articles, which are annotated with different named entities (i.e., materials, properties, values, conditions) as well as their N-ary relations by domain experts. POLYIE presents several unique challenges due to diverse lexical formats of entities, ambiguity between entities, and variable-length relations. We evaluate state-of-the-art named entity extraction and relation extraction models on POLYIE, analyze their strengths and weaknesses, and highlight some difficult cases for these models. To the best of our knowledge, POLYIE is the first SciIE benchmark for polymer materials, and we hope it will lead to more research efforts from the community on this challenging task. Our code and data are available on: https://github.com/jerry3027/PolyIE.