YATO: Yet Another deep learning based Text analysis Open toolkit

We introduce YATO, an open-source toolkit for text analysis with deep learning. It focuses on fundamental sequence labeling and sequence classification tasks on text. Designed in a hierarchical structure, YATO supports free combinations of three types of features including 1) traditional neural networks (CNN, RNN, etc.); 2) pre-trained language models (BERT, RoBERTa, ELECTRA, etc.); and 3) user-customed neural features via a simple configurable file. Benefiting from the advantages of flexibility and ease of use, YATO can facilitate reproducing and refinement of state-of-the-art NLP models, and promote the cross-disciplinary applications of NLP techniques. Source code, examples, and documentation are publicly available at https://github.com/jiesutd/YATO.

METS-CoV: A Dataset of Medical Entity and Targeted Sentiment on COVID-19 Related Tweets

The COVID-19 pandemic continues to bring up various topics discussed or debated on social media. In order to explore the impact of pandemics on people's lives, it is crucial to understand the public's concerns and attitudes towards pandemic-related entities (e.g., drugs, vaccines) on social media. However, models trained on existing named entity recognition (NER) or targeted sentiment analysis (TSA) datasets have limited ability to understand COVID-19-related social media texts because these datasets are not designed or annotated from a medical perspective. This paper releases METS-CoV, a dataset containing medical entities and targeted sentiments from COVID-19-related tweets. METS-CoV contains 10,000 tweets with 7 types of entities, including 4 medical entity types (Disease, Drug, Symptom, and Vaccine) and 3 general entity types (Person, Location, and Organization). To further investigate tweet users' attitudes toward specific entities, 4 types of entities (Person, Organization, Drug, and Vaccine) are selected and annotated with user sentiments, resulting in a targeted sentiment dataset with 9,101 entities (in 5,278 tweets). To the best of our knowledge, METS-CoV is the first dataset to collect medical entities and corresponding sentiments of COVID-19-related tweets. We benchmark the performance of classical machine learning models and state-of-the-art deep learning models on NER and TSA tasks with extensive experiments. Results show that the dataset has vast room for improvement for both NER and TSA tasks. METS-CoV is an important resource for developing better medical social media tools and facilitating computational social science research, especially in epidemiology. Our data, annotation guidelines, benchmark models, and source code are publicly available (https://github.com/YLab-Open/METS-CoV) to ensure reproducibility.

A Compact Online-Learning Spiking Neuromorphic Biosignal Processor

Real-time biosignal processing on wearable devices has attracted worldwide attention for its potential in healthcare applications. However, the requirement of low-area, low-power and high adaptability to different patients challenge conventional algorithms and hardware platforms. In this design, a compact online learning neuromorphic hardware architecture with ultra-low power consumption designed explicitly for biosignal processing is proposed. A trace-based Spiking-Timing-Dependent-Plasticity (STDP) lgorithm is applied to realize hardware-friendly online learning of a single-layer excitatory-inhibitory spiking neural network. Several techniques, including event-driven architecture and a fully optimized iterative computation approach, are adopted to minimize the hardware utilization and power consumption for the hardware implementation of online learning. Experiment results show that the proposed design reaches the accuracy of 87.36% and 83% for the Mixed National Institute of Standards and Technology database (MNIST) and ECG classification. The hardware architecture is implemented on a Zynq-7020 FPGA. Implementation results show that the Look-Up Table (LUT) and Flip Flops (FF) utilization reduced by 14.87 and 7.34 times, respectively, and the power consumption reduced by 21.69% compared to state of the art.

SpikeSEE: An Energy-Efficient Dynamic Scenes Processing Framework for Retinal Prostheses

Intelligent and low-power retinal prostheses are highly demanded in this era, where wearable and implantable devices are used for numerous healthcare applications. In this paper, we propose an energy-efficient dynamic scenes processing framework (SpikeSEE) that combines a spike representation encoding technique and a bio-inspired spiking recurrent neural network (SRNN) model to achieve intelligent processing and extreme low-power computation for retinal prostheses. The spike representation encoding technique could interpret dynamic scenes with sparse spike trains, decreasing the data volume. The SRNN model, inspired by the human retina special structure and spike processing method, is adopted to predict the response of ganglion cells to dynamic scenes. Experimental results show that the Pearson correlation coefficient of the proposed SRNN model achieves 0.93, which outperforms the state of the art processing framework for retinal prostheses. Thanks to the spike representation and SRNN processing, the model can extract visual features in a multiplication-free fashion. The framework achieves 12 times power reduction compared with the convolutional recurrent neural network (CRNN) processing-based framework. Our proposed SpikeSEE predicts the response of ganglion cells more accurately with lower energy consumption, which alleviates the precision and power issues of retinal prostheses and provides a potential solution for wearable or implantable prostheses.

PTab: Using the Pre-trained Language Model for Modeling Tabular Data

Tabular data is the foundation of the information age and has been extensively studied. Recent studies show that neural-based models are effective in learning contextual representation for tabular data. The learning of an effective contextual representation requires meaningful features and a large amount of data. However, current methods often fail to properly learn a contextual representation from the features without semantic information. In addition, it's intractable to enlarge the training set through mixed tabular datasets due to the difference between datasets. To address these problems, we propose a novel framework PTab, using the Pre-trained language model to model Tabular data. PTab learns a contextual representation of tabular data through a three-stage processing: Modality Transformation(MT), Masked-Language Fine-tuning(MF), and Classification Fine-tuning(CF). We initialize our model with a pre-trained Model (PTM) which contains semantic information learned from the large-scale language data. Consequently, contextual representation can be learned effectively during the fine-tuning stages. In addition, we can naturally mix the textualized tabular data to enlarge the training set to further improve representation learning. We evaluate PTab on eight popular tabular classification datasets. Experimental results show that our method has achieved a better average AUC score in supervised settings compared to the state-of-the-art baselines(e.g. XGBoost), and outperforms counterpart methods under semi-supervised settings. We present visualization results that show PTab has well instance-based interpretability.

An Online Sparse Streaming Feature Selection Algorithm

Online streaming feature selection (OSFS), which conducts feature selection in an online manner, plays an important role in dealing with high-dimensional data. In many real applications such as intelligent healthcare platform, streaming feature always has some missing data, which raises a crucial challenge in conducting OSFS, i.e., how to establish the uncertain relationship between sparse streaming features and labels. Unfortunately, existing OSFS algorithms never consider such uncertain relationship. To fill this gap, we in this paper propose an online sparse streaming feature selection with uncertainty (OS2FSU) algorithm. OS2FSU consists of two main parts: 1) latent factor analysis is utilized to pre-estimate the missing data in sparse streaming features before con-ducting feature selection, and 2) fuzzy logic and neighborhood rough set are employed to alleviate the uncertainty between estimated streaming features and labels during conducting feature selection. In the experiments, OS2FSU is compared with five state-of-the-art OSFS algorithms on six real datasets. The results demonstrate that OS2FSU outperforms its competitors when missing data are encountered in OSFS.

ATCA: an Arc Trajectory Based Model with Curvature Attention for Video Frame Interpolation

Video frame interpolation is a classic and challenging low-level computer vision task. Recently, deep learning based methods have achieved impressive results, and it has been proven that optical flow based methods can synthesize frames with higher quality. However, most flow-based methods assume a line trajectory with a constant velocity between two input frames. Only a little work enforces predictions with curvilinear trajectory, but this requires more than two frames as input to estimate the acceleration, which takes more time and memory to execute. To address this problem, we propose an arc trajectory based model (ATCA), which learns motion prior from only two consecutive frames and also is lightweight. Experiments show that our approach performs better than many SOTA methods with fewer parameters and faster inference speed.

Personalized Promotion Decision Making Based on Direct and Enduring Effect Predictions

Promotions have been trending in the e-commerce marketplace to build up customer relationships and guide customers towards the desired actions. Since incentives are effective to engage customers and customers have different preferences for different types of incentives, the demand for personalized promotion decision making is increasing over time. However, research on promotion decision making has focused specifically on purchase conversion during the promotion period (the direct effect), while generally disregarding the enduring effect in the post promotion period. To achieve a better lift return on investment (lift ROI) on the enduring effect of the promotion and improve customer retention and loyalty, we propose a framework of multiple treatment promotion decision making by modeling each customer's direct and enduring response. First, we propose a customer direct and enduring effect (CDEE) model which predicts the customer direct and enduring response. With the help of the predictions of the CDEE, we personalize incentive allocation to optimize the enduring effect while keeping the cost under the budget. To estimate the effect of decision making, we apply an unbiased evaluation approach of business metrics with randomized control trial (RCT) data. We compare our method with benchmarks using two promotions in Mercari and achieve significantly better results.

Low-resource Accent Classification in Geographically-proximate Settings: A Forensic and Sociophonetics Perspective

Accented speech recognition and accent classification are relatively under-explored research areas in speech technology. Recently, deep learning-based methods and Transformer-based pretrained models have achieved superb performances in both areas. However, most accent classification tasks focused on classifying different kinds of English accents and little attention was paid to geographically-proximate accent classification, especially under a low-resource setting where forensic speech science tasks usually encounter. In this paper, we explored three main accent modelling methods combined with two different classifiers based on 105 speaker recordings retrieved from five urban varieties in Northern England. Although speech representations generated from pretrained models generally have better performances in downstream classification, traditional methods like Mel Frequency Cepstral Coefficients (MFCCs) and formant measurements are equipped with specific strengths. These results suggest that in forensic phonetics scenario where data are relatively scarce, a simple modelling method and classifier could be competitive with state-of-the-art pretrained speech models as feature extractors, which could enhance a sooner estimation for the accent information in practices. Besides, our findings also cross-validated a new methodology in quantifying sociophonetic changes.

Using Twitter Data to Understand Public Perceptions of Approved versus Off-label Use for COVID-19-related Medications

Understanding public discourse on emergency use of unproven therapeutics is essential to monitor safe use and combat misinformation. We developed a natural language processing (NLP)-based pipeline to understand public perceptions of and stances on COVID-19-related drugs on Twitter across time. This retrospective study included 609,189 US-based tweets between January 29th, 2020 and November 30th, 2021 on four drugs that gained wide public attention during the COVID-19 pandemic: 1) Hydroxychloroquine and Ivermectin, drug therapies with anecdotal evidence; and 2) Molnupiravir and Remdesivir, FDA-approved treatment options for eligible patients. Time-trend analysis was used to understand the popularity and related events. Content and demographic analyses were conducted to explore potential rationales of people's stances on each drug. Time-trend analysis revealed that Hydroxychloroquine and Ivermectin received much more discussion than Molnupiravir and Remdesivir, particularly during COVID-19 surges. Hydroxychloroquine and Ivermectin were highly politicized, related to conspiracy theories, hearsay, celebrity effects, etc. The distribution of stance between the two major US political parties was significantly different (p<0.001); Republicans were much more likely to support Hydroxychloroquine (+55%) and Ivermectin (+30%) than Democrats. People with healthcare backgrounds tended to oppose Hydroxychloroquine (+7%) more than the general population; in contrast, the general population was more likely to support Ivermectin (+14%). We make all the data, code, and models available at https://github.com/ningkko/COVID-drug.