Dual-Channel Reliable Breast Ultrasound Image Classification Based on Explainable Attribution and Uncertainty Quantification

This paper focuses on the classification task of breast ultrasound images and researches on the reliability measurement of classification results. We proposed a dual-channel evaluation framework based on the proposed inference reliability and predictive reliability scores. For the inference reliability evaluation, human-aligned and doctor-agreed inference rationales based on the improved feature attribution algorithm SP-RISA are gracefully applied. Uncertainty quantification is used to evaluate the predictive reliability via the Test Time Enhancement. The effectiveness of this reliability evaluation framework has been verified on our breast ultrasound clinical dataset YBUS, and its robustness is verified on the public dataset BUSI. The expected calibration errors on both datasets are significantly lower than traditional evaluation methods, which proves the effectiveness of our proposed reliability measurement.

So You Want to Image Myelin Using MRI: Advanced Magnetic Susceptibility Imaging for Myelin

In MRI, researchers have long endeavored to effectively visualize myelin distribution in the brain, a pursuit with significant implications for both scientific research and clinical applications. Over time, various methods such as myelin water imaging, magnetization transfer imaging, and relaxometric imaging have been developed, each carrying distinct advantages and limitations. Recently, an innovative technique named as magnetic susceptibility source separation has emerged, introducing a novel surrogate biomarker for myelin in the form of a diamagnetic susceptibility map. This paper comprehensively reviews this cutting-edge method, providing the fundamental concepts of magnetic susceptibility, susceptibility imaging, and the validation of the diamagnetic susceptibility map as a myelin biomarker. Additionally, the paper explores essential aspects of data acquisition and processing, offering practical insights for readers. A comparison with established myelin imaging methods is also presented, and both current and prospective clinical and scientific applications are discussed to provide a holistic understanding of the technique. This work aims to serve as a foundational resource for newcomers entering this dynamic and rapidly expanding field.

Low-Resource Vision Challenges for Foundation Models

Low-resource settings are well-established in natural language processing, where many languages lack sufficient data for machine learning at scale. However, low-resource problems are under-explored in computer vision. In this paper, we strive to address this gap and explore the challenges of low-resource image tasks with vision foundation models. Thus, we first collect a benchmark of genuinely low-resource image data, covering historic maps, circuit diagrams, and mechanical drawings. These low-resource settings all share the three challenges of data scarcity, fine-grained differences, and the distribution shift from natural images to the specialized domain of interest. While existing foundation models have shown impressive generalizability, we find they cannot transfer well to our low-resource tasks. To begin to tackle the challenges of low-resource vision, we introduce one simple baseline per challenge. Specifically, we propose to i) enlarge the data space by generative models, ii) adopt the best sub-kernels to encode local regions for fine-grained difference discovery and iii) learn attention for specialized domains. Experiments on the three low-resource data sources in our benchmark demonstrate our proposals already provide a better baseline than common transfer learning, data augmentation, and fine-grained methods. This highlights the unique characteristics and challenges of low-resource vision for foundation models that warrant further investigation. Project website: https://xiaobai1217.github.io/Low-Resource-Vision/.

SPDGAN: A Generative Adversarial Network based on SPD Manifold Learning for Automatic Image Colorization

This paper addresses the automatic colorization problem, which converts a gray-scale image to a colorized one. Recent deep-learning approaches can colorize automatically grayscale images. However, when it comes to different scenes which contain distinct color styles, it is difficult to accurately capture the color characteristics. In this work, we propose a fully automatic colorization approach based on Symmetric Positive Definite (SPD) Manifold Learning with a generative adversarial network (SPDGAN) that improves the quality of the colorization results. Our SPDGAN model establishes an adversarial game between two discriminators and a generator. The latter is based on ResNet architecture with few alterations. Its goal is to generate fake colorized images without losing color information across layers through residual connections. Then, we employ two discriminators from different domains. The first one is devoted to the image pixel domain, while the second one is to the Riemann manifold domain which helps to avoid color misalignment. Extensive experiments are conducted on the Places365 and COCO-stuff databases to test the effect of each component of our SPDGAN. In addition, quantitative and qualitative comparisons with state-of-the-art methods demonstrate the effectiveness of our model by achieving more realistic colorized images with less artifacts visually, and good results of PSNR, SSIM, and FID values.

Pedestrian Detection in Low-Light Conditions: A Comprehensive Survey

Pedestrian detection remains a critical problem in various domains, such as computer vision, surveillance, and autonomous driving. In particular, accurate and instant detection of pedestrians in low-light conditions and reduced visibility is of utmost importance for autonomous vehicles to prevent accidents and save lives. This paper aims to comprehensively survey various pedestrian detection approaches, baselines, and datasets that specifically target low-light conditions. The survey discusses the challenges faced in detecting pedestrians at night and explores state-of-the-art methodologies proposed in recent years to address this issue. These methodologies encompass a diverse range, including deep learning-based, feature-based, and hybrid approaches, which have shown promising results in enhancing pedestrian detection performance under challenging lighting conditions. Furthermore, the paper highlights current research directions in the field and identifies potential solutions that merit further investigation by researchers. By thoroughly examining pedestrian detection techniques in low-light conditions, this survey seeks to contribute to the advancement of safer and more reliable autonomous driving systems and other applications related to pedestrian safety. Accordingly, most of the current approaches in the field use deep learning-based image fusion methodologies (i.e., early, halfway, and late fusion) for accurate and reliable pedestrian detection. Moreover, the majority of the works in the field (approximately 48%) have been evaluated on the KAIST dataset, while the real-world video feeds recorded by authors have been used in less than six percent of the works.

Developing ChatGPT for Biology and Medicine: A Complete Review of Biomedical Question Answering

ChatGPT explores a strategic blueprint of question answering (QA) in delivering medical diagnosis, treatment recommendations, and other healthcare support. This is achieved through the increasing incorporation of medical domain data via natural language processing (NLP) and multimodal paradigms. By transitioning the distribution of text, images, videos, and other modalities from the general domain to the medical domain, these techniques have expedited the progress of medical domain question answering (MDQA). They bridge the gap between human natural language and sophisticated medical domain knowledge or expert manual annotations, handling large-scale, diverse, unbalanced, or even unlabeled data analysis scenarios in medical contexts. Central to our focus is the utilizing of language models and multimodal paradigms for medical question answering, aiming to guide the research community in selecting appropriate mechanisms for their specific medical research requirements. Specialized tasks such as unimodal-related question answering, reading comprehension, reasoning, diagnosis, relation extraction, probability modeling, and others, as well as multimodal-related tasks like vision question answering, image caption, cross-modal retrieval, report summarization, and generation, are discussed in detail. Each section delves into the intricate specifics of the respective method under consideration. This paper highlights the structures and advancements of medical domain explorations against general domain methods, emphasizing their applications across different tasks and datasets. It also outlines current challenges and opportunities for future medical domain research, paving the way for continued innovation and application in this rapidly evolving field.

Learning Multimodal Volumetric Features for Large-Scale Neuron Tracing

The current neuron reconstruction pipeline for electron microscopy (EM) data usually includes automatic image segmentation followed by extensive human expert proofreading. In this work, we aim to reduce human workload by predicting connectivity between over-segmented neuron pieces, taking both microscopy image and 3D morphology features into account, similar to human proofreading workflow. To this end, we first construct a dataset, named FlyTracing, that contains millions of pairwise connections of segments expanding the whole fly brain, which is three orders of magnitude larger than existing datasets for neuron segment connection. To learn sophisticated biological imaging features from the connectivity annotations, we propose a novel connectivity-aware contrastive learning method to generate dense volumetric EM image embedding. The learned embeddings can be easily incorporated with any point or voxel-based morphological representations for automatic neuron tracing. Extensive comparisons of different combination schemes of image and morphological representation in identifying split errors across the whole fly brain demonstrate the superiority of the proposed approach, especially for the locations that contain severe imaging artifacts, such as section missing and misalignment. The dataset and code are available at https://github.com/Levishery/Flywire-Neuron-Tracing.

DreamDistribution: Prompt Distribution Learning for Text-to-Image Diffusion Models

The popularization of Text-to-Image (T2I) diffusion models enables the generation of high-quality images from text descriptions. However, generating diverse customized images with reference visual attributes remains challenging. This work focuses on personalizing T2I diffusion models at a more abstract concept or category level, adapting commonalities from a set of reference images while creating new instances with sufficient variations. We introduce a solution that allows a pretrained T2I diffusion model to learn a set of soft prompts, enabling the generation of novel images by sampling prompts from the learned distribution. These prompts offer text-guided editing capabilities and additional flexibility in controlling variation and mixing between multiple distributions. We also show the adaptability of the learned prompt distribution to other tasks, such as text-to-3D. Finally we demonstrate effectiveness of our approach through quantitative analysis including automatic evaluation and human assessment. Project website: https://briannlongzhao.github.io/DreamDistribution

Patch-wise Graph Contrastive Learning for Image Translation

Recently, patch-wise contrastive learning is drawing attention for the image translation by exploring the semantic correspondence between the input and output images. To further explore the patch-wise topology for high-level semantic understanding, here we exploit the graph neural network to capture the topology-aware features. Specifically, we construct the graph based on the patch-wise similarity from a pretrained encoder, whose adjacency matrix is shared to enhance the consistency of patch-wise relation between the input and the output. Then, we obtain the node feature from the graph neural network, and enhance the correspondence between the nodes by increasing mutual information using the contrastive loss. In order to capture the hierarchical semantic structure, we further propose the graph pooling. Experimental results demonstrate the state-of-art results for the image translation thanks to the semantic encoding by the constructed graphs.

Mitigating Perspective Distortion-induced Shape Ambiguity in Image Crops

Objects undergo varying amounts of perspective distortion as they move across a camera's field of view. Models for predicting 3D from a single image often work with crops around the object of interest and ignore the location of the object in the camera's field of view. We note that ignoring this location information further exaggerates the inherent ambiguity in making 3D inferences from 2D images and can prevent models from even fitting to the training data. To mitigate this ambiguity, we propose Intrinsics-Aware Positional Encoding (KPE), which incorporates information about the location of crops in the image and camera intrinsics. Experiments on three popular 3D-from-a-single-image benchmarks: depth prediction on NYU, 3D object detection on KITTI & nuScenes, and predicting 3D shapes of articulated objects on ARCTIC, show the benefits of KPE.