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The RSNA-ASNR-MICCAI BraTS 2021 Benchmark on Brain Tumor Segmentation and Radiogenomic Classification


Jul 05, 2021
Ujjwal Baid, Satyam Ghodasara, Michel Bilello, Suyash Mohan, Evan Calabrese, Errol Colak, Keyvan Farahani, Jayashree Kalpathy-Cramer, Felipe C. Kitamura, Sarthak Pati, Luciano M. Prevedello, Jeffrey D. Rudie, Chiharu Sako, Russell T. Shinohara, Timothy Bergquist, Rong Chai, James Eddy, Julia Elliott, Walter Reade, Thomas Schaffter, Thomas Yu, Jiaxin Zheng, BraTS Annotators, Christos Davatzikos, John Mongan, Christopher Hess, Soonmee Cha, Javier Villanueva-Meyer, John B. Freymann, Justin S. Kirby, Benedikt Wiestler, Priscila Crivellaro, Rivka R. Colen, Aikaterini Kotrotsou, Daniel Marcus, Mikhail Milchenko, Arash Nazeri, Hassan Fathallah-Shaykh, Roland Wiest, Andras Jakab, Marc-Andre Weber, Abhishek Mahajan, Bjoern Menze, Adam E. Flanders, Spyridon Bakas

* 17 pages, 2 figures, 1 table 

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The Federated Tumor Segmentation (FeTS) Challenge


May 14, 2021
Sarthak Pati, Ujjwal Baid, Maximilian Zenk, Brandon Edwards, Micah Sheller, G. Anthony Reina, Patrick Foley, Alexey Gruzdev, Jason Martin, Shadi Albarqouni, Yong Chen, Russell Taki Shinohara, Annika Reinke, David Zimmerer, John B. Freymann, Justin S. Kirby, Christos Davatzikos, Rivka R. Colen, Aikaterini Kotrotsou, Daniel Marcus, Mikhail Milchenko, Arash Nazeri, Hassan Fathallah-Shaykh, Roland Wiest, Andras Jakab, Marc-Andre Weber, Abhishek Mahajan, Lena Maier-Hein, Jens Kleesiek, Bjoern Menze, Klaus Maier-Hein, Spyridon Bakas


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OpenFL: An open-source framework for Federated Learning


May 13, 2021
G Anthony Reina, Alexey Gruzdev, Patrick Foley, Olga Perepelkina, Mansi Sharma, Igor Davidyuk, Ilya Trushkin, Maksim Radionov, Aleksandr Mokrov, Dmitry Agapov, Jason Martin, Brandon Edwards, Micah J. Sheller, Sarthak Pati, Prakash Narayana Moorthy, Shih-han Wang, Prashant Shah, Spyridon Bakas


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GaNDLF: A Generally Nuanced Deep Learning Framework for Scalable End-to-End Clinical Workflows in Medical Imaging


Feb 26, 2021
Sarthak Pati, Siddhesh P. Thakur, Megh Bhalerao, Ujjwal Baid, Caleb Grenko, Brandon Edwards, Micah Sheller, Jose Agraz, Bhakti Baheti, Vishnu Bashyam, Parth Sharma, Babak Haghighi, Aimilia Gastounioti, Mark Bergman, Bjoern Menze, Despina Kontos, Christos Davatzikos, Spyridon Bakas


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Accurate and Robust Alignment of Variable-stained Histologic Images Using a General-purpose Greedy Diffeomorphic Registration Tool


Apr 26, 2019
Ludovic Venet, Sarthak Pati, Paul Yushkevich, Spyridon Bakas


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