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Multi-class motion-based semantic segmentation for ureteroscopy and laser lithotripsy


Apr 02, 2021
Soumya Gupta, Sharib Ali, Louise Goldsmith, Ben Turney, Jens Rittscher

* 18 pages, 5 figures 

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FANet: A Feedback Attention Network for Improved Biomedical Image Segmentation


Mar 31, 2021
Nikhil Kumar Tomar, Debesh Jha, Michael A. Riegler, Håvard D. Johansen, Dag Johansen, Jens Rittscher, Pål Halvorsen, Sharib Ali


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Assessing YOLACT++ for real time and robust instance segmentation of medical instruments in endoscopic procedures


Mar 30, 2021
Juan Carlos Angeles Ceron, Leonardo Chang, Gilberto Ochoa-Ruiz, Sharib Ali

* Preprint under review for EMBC 2021 following IEEE guidelines 

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DDANet: Dual Decoder Attention Network for Automatic Polyp Segmentation


Dec 30, 2020
Nikhil Kumar Tomar, Debesh Jha, Sharib Ali, Håvard D. Johansen, Dag Johansen, Michael A. Riegler, Pål Halvorsen


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Unsupervised Adversarial Domain Adaptation For Barrett's Segmentation


Dec 09, 2020
Numan Celik, Soumya Gupta, Sharib Ali, Jens Rittscher

* 5 pages, 3 figures, conference paper 

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Real-Time Polyp Detection, Localisation and Segmentation in Colonoscopy Using Deep Learning


Nov 15, 2020
Debesh Jha, Sharib Ali, Håvard D. Johansen, Dag D. Johansen, Jens Rittscher, Michael A. Riegler, Pål Halvorsen


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A translational pathway of deep learning methods in GastroIntestinal Endoscopy


Oct 12, 2020
Sharib Ali, Mariia Dmitrieva, Noha Ghatwary, Sophia Bano, Gorkem Polat, Alptekin Temizel, Adrian Krenzer, Amar Hekalo, Yun Bo Guo, Bogdan Matuszewski, Mourad Gridach, Irina Voiculescu, Vishnusai Yoganand, Arnav Chavan, Aryan Raj, Nhan T. Nguyen, Dat Q. Tran, Le Duy Huynh, Nicolas Boutry, Shahadate Rezvy, Haijian Chen, Yoon Ho Choi, Anand Subramanian, Velmurugan Balasubramanian, Xiaohong W. Gao, Hongyu Hu, Yusheng Liao, Danail Stoyanov, Christian Daul, Stefano Realdon, Renato Cannizzaro, Dominique Lamarque, Terry Tran-Nguyen, Adam Bailey, Barbara Braden, James East, Jens Rittscher

* 30 pages 

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Additive Angular Margin for Few Shot Learning to Classify Clinical Endoscopy Images


Mar 26, 2020
Sharib Ali, Binod Bhattarai, Tae-Kyun Kim, Jens Rittscher

* 10 pages 

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Endoscopy disease detection challenge 2020


Mar 07, 2020
Sharib Ali, Noha Ghatwary, Barbara Braden, Dominique Lamarque, Adam Bailey, Stefano Realdon, Renato Cannizzaro, Jens Rittscher, Christian Daul, James East


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Conv2Warp: An unsupervised deformable image registration with continuous convolution and warping


Aug 16, 2019
Sharib Ali, Jens Rittscher

* 8 pages (accepted at 10th International Workshop on Machine Learning in Medical Imaging, in conjunction with MICCAI2019) 

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Ink removal from histopathology whole slide images by combining classification, detection and image generation models


May 10, 2019
Sharib Ali, Nasullah Khalid Alham, Clare Verrill, Jens Rittscher

* Accepted paper at IEEE International Symposium on Biomedical Imaging (ISBI) 2019, Venice, Italy 

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Efficient video indexing for monitoring disease activity and progression in the upper gastrointestinal tract


May 10, 2019
Sharib Ali, Jens Rittscher

* Accepted at IEEE International Symposium on Biomedical Imaging (ISBI), 2019 

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Endoscopy artifact detection (EAD 2019) challenge dataset


May 08, 2019
Sharib Ali, Felix Zhou, Christian Daul, Barbara Braden, Adam Bailey, Stefano Realdon, James East, Georges Wagnières, Victor Loschenov, Enrico Grisan, Walter Blondel, Jens Rittscher

* 12 pages, EAD2019 dataset description 

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A deep learning framework for quality assessment and restoration in video endoscopy


Apr 15, 2019
Sharib Ali, Felix Zhou, Adam Bailey, Barbara Braden, James East, Xin Lu, Jens Rittscher

* 14 pages 

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Towards ultra-high resolution 3D reconstruction of a whole rat brain from 3D-PLI data


Jul 29, 2018
Sharib Ali, Martin Schober, Philipp Schlöme, Katrin Amunts, Markus Axer, Karl Rohr

* 9 pages, Accepted at 2nd International Workshop on Connectomics in NeuroImaging (CNI), MICCAI'2018 

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