Alert button
Picture for Geert Litjens

Geert Litjens

Alert button

Hierarchical Vision Transformers for Context-Aware Prostate Cancer Grading in Whole Slide Images

Dec 19, 2023
Clément Grisi, Geert Litjens, Jeroen van der Laak

Viaarxiv icon

Understanding metric-related pitfalls in image analysis validation

Feb 09, 2023
Annika Reinke, Minu D. Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A. Emre Kavur, Tim Rädsch, Carole H. Sudre, Laura Acion, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew Blaschko, Florian Büttner, M. Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A. Cimini, Gary S. Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Robert Haase, Daniel A. Hashimoto, Michael M. Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E. Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Hannes Kenngott, Jens Kleesiek, Florian Kofler, Thijs Kooi, Annette Kopp-Schneider, Michal Kozubek, Anna Kreshuk, Tahsin Kurc, Bennett A. Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L. Martel, Peter Mattson, Erik Meijering, Bjoern Menze, Karel G. M. Moons, Henning Müller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M. Rafelski, Nasir Rajpoot, Mauricio Reyes, Michael A. Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I. Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M. Summers, Abdel A. Taha, Aleksei Tiulpin, Sotirios A. Tsaftaris, Ben Van Calster, Gaël Varoquaux, Manuel Wiesenfarth, Ziv R. Yaniv, Paul F. Jäger, Lena Maier-Hein

Figure 1 for Understanding metric-related pitfalls in image analysis validation
Figure 2 for Understanding metric-related pitfalls in image analysis validation
Figure 3 for Understanding metric-related pitfalls in image analysis validation
Figure 4 for Understanding metric-related pitfalls in image analysis validation
Viaarxiv icon

Domain adaptation strategies for cancer-independent detection of lymph node metastases

Jul 13, 2022
Péter Bándi, Maschenka Balkenhol, Marcory van Dijk, Bram van Ginneken, Jeroen van der Laak, Geert Litjens

Figure 1 for Domain adaptation strategies for cancer-independent detection of lymph node metastases
Figure 2 for Domain adaptation strategies for cancer-independent detection of lymph node metastases
Figure 3 for Domain adaptation strategies for cancer-independent detection of lymph node metastases
Figure 4 for Domain adaptation strategies for cancer-independent detection of lymph node metastases
Viaarxiv icon

Metrics reloaded: Pitfalls and recommendations for image analysis validation

Jun 03, 2022
Lena Maier-Hein, Annika Reinke, Evangelia Christodoulou, Ben Glocker, Patrick Godau, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A. Riegler, Manuel Wiesenfarth, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A. Emre Kavur, Tim Rädsch, Minu D. Tizabi, Laura Acion, Michela Antonelli, Tal Arbel, Spyridon Bakas, Peter Bankhead, Arriel Benis, M. Jorge Cardoso, Veronika Cheplygina, Beth Cimini, Gary S. Collins, Keyvan Farahani, Bram van Ginneken, Daniel A. Hashimoto, Michael M. Hoffman, Merel Huisman, Pierre Jannin, Charles E. Kahn, Alexandros Karargyris, Alan Karthikesalingam, Hannes Kenngott, Annette Kopp-Schneider, Anna Kreshuk, Tahsin Kurc, Bennett A. Landman, Geert Litjens, Amin Madani, Klaus Maier-Hein, Anne L. Martel, Peter Mattson, Erik Meijering, Bjoern Menze, David Moher, Karel G. M. Moons, Henning Müller, Felix Nickel, Brennan Nichyporuk, Jens Petersen, Nasir Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clarisa Sánchez Gutiérrez, Shravya Shetty, Maarten van Smeden, Carole H. Sudre, Ronald M. Summers, Abdel A. Taha, Sotirios A. Tsaftaris, Ben Van Calster, Gaël Varoquaux, Paul F. Jäger

Figure 1 for Metrics reloaded: Pitfalls and recommendations for image analysis validation
Figure 2 for Metrics reloaded: Pitfalls and recommendations for image analysis validation
Figure 3 for Metrics reloaded: Pitfalls and recommendations for image analysis validation
Figure 4 for Metrics reloaded: Pitfalls and recommendations for image analysis validation
Viaarxiv icon

Automatic tumour segmentation in H&E-stained whole-slide images of the pancreas

Dec 01, 2021
Pierpaolo Vendittelli, Esther M. M. Smeets, Geert Litjens

Figure 1 for Automatic tumour segmentation in H&E-stained whole-slide images of the pancreas
Figure 2 for Automatic tumour segmentation in H&E-stained whole-slide images of the pancreas
Figure 3 for Automatic tumour segmentation in H&E-stained whole-slide images of the pancreas
Figure 4 for Automatic tumour segmentation in H&E-stained whole-slide images of the pancreas
Viaarxiv icon

The Medical Segmentation Decathlon

Jun 10, 2021
Michela Antonelli, Annika Reinke, Spyridon Bakas, Keyvan Farahani, AnnetteKopp-Schneider, Bennett A. Landman, Geert Litjens, Bjoern Menze, Olaf Ronneberger, Ronald M. Summers, Bram van Ginneken, Michel Bilello, Patrick Bilic, Patrick F. Christ, Richard K. G. Do, Marc J. Gollub, Stephan H. Heckers, Henkjan Huisman, William R. Jarnagin, Maureen K. McHugo, Sandy Napel, Jennifer S. Goli Pernicka, Kawal Rhode, Catalina Tobon-Gomez, Eugene Vorontsov, Henkjan Huisman, James A. Meakin, Sebastien Ourselin, Manuel Wiesenfarth, Pablo Arbelaez, Byeonguk Bae, Sihong Chen, Laura Daza, Jianjiang Feng, Baochun He, Fabian Isensee, Yuanfeng Ji, Fucang Jia, Namkug Kim, Ildoo Kim, Dorit Merhof, Akshay Pai, Beomhee Park, Mathias Perslev, Ramin Rezaiifar, Oliver Rippel, Ignacio Sarasua, Wei Shen, Jaemin Son, Christian Wachinger, Liansheng Wang, Yan Wang, Yingda Xia, Daguang Xu, Zhanwei Xu, Yefeng Zheng, Amber L. Simpson, Lena Maier-Hein, M. Jorge Cardoso

Figure 1 for The Medical Segmentation Decathlon
Figure 2 for The Medical Segmentation Decathlon
Figure 3 for The Medical Segmentation Decathlon
Figure 4 for The Medical Segmentation Decathlon
Viaarxiv icon

Common Limitations of Image Processing Metrics: A Picture Story

Apr 13, 2021
Annika Reinke, Matthias Eisenmann, Minu D. Tizabi, Carole H. Sudre, Tim Rädsch, Michela Antonelli, Tal Arbel, Spyridon Bakas, M. Jorge Cardoso, Veronika Cheplygina, Keyvan Farahani, Ben Glocker, Doreen Heckmann-Nötzel, Fabian Isensee, Pierre Jannin, Charles E. Kahn, Jens Kleesiek, Tahsin Kurc, Michal Kozubek, Bennett A. Landman, Geert Litjens, Klaus Maier-Hein, Bjoern Menze, Henning Müller, Jens Petersen, Mauricio Reyes, Nicola Rieke, Bram Stieltjes, Ronald M. Summers, Sotirios A. Tsaftaris, Bram van Ginneken, Annette Kopp-Schneider, Paul Jäger, Lena Maier-Hein

Figure 1 for Common Limitations of Image Processing Metrics: A Picture Story
Figure 2 for Common Limitations of Image Processing Metrics: A Picture Story
Figure 3 for Common Limitations of Image Processing Metrics: A Picture Story
Figure 4 for Common Limitations of Image Processing Metrics: A Picture Story
Viaarxiv icon

Deep Learning Methods for Lung Cancer Segmentation in Whole-slide Histopathology Images -- the ACDC@LungHP Challenge 2019

Aug 21, 2020
Zhang Li, Jiehua Zhang, Tao Tan, Xichao Teng, Xiaoliang Sun, Yang Li, Lihong Liu, Yang Xiao, Byungjae Lee, Yilong Li, Qianni Zhang, Shujiao Sun, Yushan Zheng, Junyu Yan, Ni Li, Yiyu Hong, Junsu Ko, Hyun Jung, Yanling Liu, Yu-cheng Chen, Ching-wei Wang, Vladimir Yurovskiy, Pavel Maevskikh, Vahid Khanagha, Yi Jiang, Xiangjun Feng, Zhihong Liu, Daiqiang Li, Peter J. Schüffler, Qifeng Yu, Hui Chen, Yuling Tang, Geert Litjens

Figure 1 for Deep Learning Methods for Lung Cancer Segmentation in Whole-slide Histopathology Images -- the ACDC@LungHP Challenge 2019
Figure 2 for Deep Learning Methods for Lung Cancer Segmentation in Whole-slide Histopathology Images -- the ACDC@LungHP Challenge 2019
Figure 3 for Deep Learning Methods for Lung Cancer Segmentation in Whole-slide Histopathology Images -- the ACDC@LungHP Challenge 2019
Figure 4 for Deep Learning Methods for Lung Cancer Segmentation in Whole-slide Histopathology Images -- the ACDC@LungHP Challenge 2019
Viaarxiv icon