SynEVO: A neuro-inspired spatiotemporal evolutional framework for cross-domain adaptation

Discovering regularities from spatiotemporal systems can benefit various scientific and social planning. Current spatiotemporal learners usually train an independent model from a specific source data that leads to limited transferability among sources, where even correlated tasks requires new design and training. The key towards increasing cross-domain knowledge is to enable collective intelligence and model evolution. In this paper, inspired by neuroscience theories, we theoretically derive the increased information boundary via learning cross-domain collective intelligence and propose a Synaptic EVOlutional spatiotemporal network, SynEVO, where SynEVO breaks the model independence and enables cross-domain knowledge to be shared and aggregated. Specifically, we first re-order the sample groups to imitate the human curriculum learning, and devise two complementary learners, elastic common container and task-independent extractor to allow model growth and task-wise commonality and personality disentanglement. Then an adaptive dynamic coupler with a new difference metric determines whether the new sample group should be incorporated into common container to achieve model evolution under various domains. Experiments show that SynEVO improves the generalization capacity by at most 42% under cross-domain scenarios and SynEVO provides a paradigm of NeuroAI for knowledge transfer and adaptation.

Soft causal learning for generalized molecule property prediction: An environment perspective

Learning on molecule graphs has become an increasingly important topic in AI for science, which takes full advantage of AI to facilitate scientific discovery. Existing solutions on modeling molecules utilize Graph Neural Networks (GNNs) to achieve representations but they mostly fail to adapt models to out-of-distribution (OOD) samples. Although recent advances on OOD-oriented graph learning have discovered the invariant rationale on graphs, they still ignore three important issues, i.e., 1) the expanding atom patterns regarding environments on graphs lead to failures of invariant rationale based models, 2) the associations between discovered molecular subgraphs and corresponding properties are complex where causal substructures cannot fully interpret the labels. 3) the interactions between environments and invariances can influence with each other thus are challenging to be modeled. To this end, we propose a soft causal learning framework, to tackle the unresolved OOD challenge in molecular science, from the perspective of fully modeling the molecule environments and bypassing the invariant subgraphs. Specifically, we first incorporate chemistry theories into our graph growth generator to imitate expaned environments, and then devise an GIB-based objective to disentangle environment from whole graphs and finally introduce a cross-attention based soft causal interaction, which allows dynamic interactions between environments and invariances. We perform experiments on seven datasets by imitating different kinds of OOD generalization scenarios. Extensive comparison, ablation experiments as well as visualized case studies demonstrate well generalization ability of our proposal.

Get Rid of Task Isolation: A Continuous Multi-task Spatio-Temporal Learning Framework

Spatiotemporal learning has become a pivotal technique to enable urban intelligence. Traditional spatiotemporal models mostly focus on a specific task by assuming a same distribution between training and testing sets. However, given that urban systems are usually dynamic, multi-sourced with imbalanced data distributions, current specific task-specific models fail to generalize to new urban conditions and adapt to new domains without explicitly modeling interdependencies across various dimensions and types of urban data. To this end, we argue that there is an essential to propose a Continuous Multi-task Spatio-Temporal learning framework (CMuST) to empower collective urban intelligence, which reforms the urban spatiotemporal learning from single-domain to cooperatively multi-dimensional and multi-task learning. Specifically, CMuST proposes a new multi-dimensional spatiotemporal interaction network (MSTI) to allow cross-interactions between context and main observations as well as self-interactions within spatial and temporal aspects to be exposed, which is also the core for capturing task-level commonality and personalization. To ensure continuous task learning, a novel Rolling Adaptation training scheme (RoAda) is devised, which not only preserves task uniqueness by constructing data summarization-driven task prompts, but also harnesses correlated patterns among tasks by iterative model behavior modeling. We further establish a benchmark of three cities for multi-task spatiotemporal learning, and empirically demonstrate the superiority of CMuST via extensive evaluations on these datasets. The impressive improvements on both few-shot streaming data and new domain tasks against existing SOAT methods are achieved. Code is available at https://github.com/DILab-USTCSZ/CMuST.

Delayed Bottlenecking: Alleviating Forgetting in Pre-trained Graph Neural Networks

Pre-training GNNs to extract transferable knowledge and apply it to downstream tasks has become the de facto standard of graph representation learning. Recent works focused on designing self-supervised pre-training tasks to extract useful and universal transferable knowledge from large-scale unlabeled data. However, they have to face an inevitable question: traditional pre-training strategies that aim at extracting useful information about pre-training tasks, may not extract all useful information about the downstream task. In this paper, we reexamine the pre-training process within traditional pre-training and fine-tuning frameworks from the perspective of Information Bottleneck (IB) and confirm that the forgetting phenomenon in pre-training phase may cause detrimental effects on downstream tasks. Therefore, we propose a novel \underline{D}elayed \underline{B}ottlenecking \underline{P}re-training (DBP) framework which maintains as much as possible mutual information between latent representations and training data during pre-training phase by suppressing the compression operation and delays the compression operation to fine-tuning phase to make sure the compression can be guided with labeled fine-tuning data and downstream tasks. To achieve this, we design two information control objectives that can be directly optimized and further integrate them into the actual model design. Extensive experiments on both chemistry and biology domains demonstrate the effectiveness of DBP.

Towards Robust Trajectory Representations: Isolating Environmental Confounders with Causal Learning

Trajectory modeling refers to characterizing human movement behavior, serving as a pivotal step in understanding mobility patterns. Nevertheless, existing studies typically ignore the confounding effects of geospatial context, leading to the acquisition of spurious correlations and limited generalization capabilities. To bridge this gap, we initially formulate a Structural Causal Model (SCM) to decipher the trajectory representation learning process from a causal perspective. Building upon the SCM, we further present a Trajectory modeling framework (TrajCL) based on Causal Learning, which leverages the backdoor adjustment theory as an intervention tool to eliminate the spurious correlations between geospatial context and trajectories. Extensive experiments on two real-world datasets verify that TrajCL markedly enhances performance in trajectory classification tasks while showcasing superior generalization and interpretability.

FairSTG: Countering performance heterogeneity via collaborative sample-level optimization

Spatiotemporal learning plays a crucial role in mobile computing techniques to empower smart cites. While existing research has made great efforts to achieve accurate predictions on the overall dataset, they still neglect the significant performance heterogeneity across samples. In this work, we designate the performance heterogeneity as the reason for unfair spatiotemporal learning, which not only degrades the practical functions of models, but also brings serious potential risks to real-world urban applications. To fix this gap, we propose a model-independent Fairness-aware framework for SpatioTemporal Graph learning (FairSTG), which inherits the idea of exploiting advantages of well-learned samples to challenging ones with collaborative mix-up. Specifically, FairSTG consists of a spatiotemporal feature extractor for model initialization, a collaborative representation enhancement for knowledge transfer between well-learned samples and challenging ones, and fairness objectives for immediately suppressing sample-level performance heterogeneity. Experiments on four spatiotemporal datasets demonstrate that our FairSTG significantly improves the fairness quality while maintaining comparable forecasting accuracy. Case studies show FairSTG can counter both spatial and temporal performance heterogeneity by our sample-level retrieval and compensation, and our work can potentially alleviate the risks on spatiotemporal resource allocation for underrepresented urban regions.

ComS2T: A complementary spatiotemporal learning system for data-adaptive model evolution

Spatiotemporal (ST) learning has become a crucial technique to enable smart cities and sustainable urban development. Current ST learning models capture the heterogeneity via various spatial convolution and temporal evolution blocks. However, rapid urbanization leads to fluctuating distributions in urban data and city structures over short periods, resulting in existing methods suffering generalization and data adaptation issues. Despite efforts, existing methods fail to deal with newly arrived observations and those methods with generalization capacity are limited in repeated training. Motivated by complementary learning in neuroscience, we introduce a prompt-based complementary spatiotemporal learning termed ComS2T, to empower the evolution of models for data adaptation. ComS2T partitions the neural architecture into a stable neocortex for consolidating historical memory and a dynamic hippocampus for new knowledge update. We first disentangle two disjoint structures into stable and dynamic weights, and then train spatial and temporal prompts by characterizing distribution of main observations to enable prompts adaptive to new data. This data-adaptive prompt mechanism, combined with a two-stage training process, facilitates fine-tuning of the neural architecture conditioned on prompts, thereby enabling efficient adaptation during testing. Extensive experiments validate the efficacy of ComS2T in adapting to various spatiotemporal out-of-distribution scenarios while maintaining efficient inference capabilities.

Graph Multi-Similarity Learning for Molecular Property Prediction

Enhancing accurate molecular property prediction relies on effective and proficient representation learning. It is crucial to incorporate diverse molecular relationships characterized by multi-similarity (self-similarity and relative similarities) between molecules. However, current molecular representation learning methods fall short in exploring multi-similarity and often underestimate the complexity of relationships between molecules. Additionally, previous multi-similarity approaches require the specification of positive and negative pairs to attribute distinct predefined weights to different relative similarities, which can introduce potential bias. In this work, we introduce Graph Multi-Similarity Learning for Molecular Property Prediction (GraphMSL) framework, along with a novel approach to formulate a generalized multi-similarity metric without the need to define positive and negative pairs. In each of the chemical modality spaces (e.g.,molecular depiction image, fingerprint, NMR, and SMILES) under consideration, we first define a self-similarity metric (i.e., similarity between an anchor molecule and another molecule), and then transform it into a generalized multi-similarity metric for the anchor through a pair weighting function. GraphMSL validates the efficacy of the multi-similarity metric across MoleculeNet datasets. Furthermore, these metrics of all modalities are integrated into a multimodal multi-similarity metric, which showcases the potential to improve the performance. Moreover, the focus of the model can be redirected or customized by altering the fusion function. Last but not least, GraphMSL proves effective in drug discovery evaluations through post-hoc analyses of the learnt representations.

Earthfarseer: Versatile Spatio-Temporal Dynamical Systems Modeling in One Model

Efficiently modeling spatio-temporal (ST) physical processes and observations presents a challenging problem for the deep learning community. Many recent studies have concentrated on meticulously reconciling various advantages, leading to designed models that are neither simple nor practical. To address this issue, this paper presents a systematic study on existing shortcomings faced by off-the-shelf models, including lack of local fidelity, poor prediction performance over long time-steps,low scalability, and inefficiency. To systematically address the aforementioned problems, we propose an EarthFarseer, a concise framework that combines parallel local convolutions and global Fourier-based transformer architectures, enabling dynamically capture the local-global spatial interactions and dependencies. EarthFarseer also incorporates a multi-scale fully convolutional and Fourier architectures to efficiently and effectively capture the temporal evolution. Our proposal demonstrates strong adaptability across various tasks and datasets, with fast convergence and better local fidelity in long time-steps predictions. Extensive experiments and visualizations over eight human society physical and natural physical datasets demonstrates the state-of-the-art performance of EarthFarseer. We release our code at https://github.com/easylearningscores/EarthFarseer.

Molecular Identification and Peak Assignment: Leveraging Multi-Level Multimodal Alignment on NMR

Nuclear magnetic resonance (NMR) spectroscopy plays an essential role across various scientific disciplines, providing valuable insights into molecular dynamics and interactions. Despite the promise of AI-enhanced NMR prediction models, challenges persist in the interpretation of spectra for tasks such as molecular retrieval, isomer recognition, and peak assignment. In response, this paper introduces Multi-Level Multimodal Alignment with Knowledge-Guided Instance-Wise Discrimination (K-M3AID) to establish meaningful correspondences between two heterogeneous modalities: molecular graphs (structures) and NMR spectra. In particular, K-M3AID employs a dual-coordinated contrastive learning architecture, and incorporates a graph-level alignment module, a node-level alignment module, and a communication channel. Notably, the framework introduces knowledge-guided instance-wise discrimination into contrastive learning within the node-level alignment module, significantly enhancing accuracy in cross-modal alignment. Additionally, K-M3AID showcases its capability of meta-learning by demonstrating that skills acquired during node-level alignment positively impact graph-level alignment. Empirical validation underscores K-M3AID's effectiveness in addressing multiple zero-shot tasks, offering a promising solution to bridge the gap between structural information and spectral data in complex NMR scenarios.