Resistive Memory-based Neural Differential Equation Solver for Score-based Diffusion Model

Human brains image complicated scenes when reading a novel. Replicating this imagination is one of the ultimate goals of AI-Generated Content (AIGC). However, current AIGC methods, such as score-based diffusion, are still deficient in terms of rapidity and efficiency. This deficiency is rooted in the difference between the brain and digital computers. Digital computers have physically separated storage and processing units, resulting in frequent data transfers during iterative calculations, incurring large time and energy overheads. This issue is further intensified by the conversion of inherently continuous and analog generation dynamics, which can be formulated by neural differential equations, into discrete and digital operations. Inspired by the brain, we propose a time-continuous and analog in-memory neural differential equation solver for score-based diffusion, employing emerging resistive memory. The integration of storage and computation within resistive memory synapses surmount the von Neumann bottleneck, benefiting the generative speed and energy efficiency. The closed-loop feedback integrator is time-continuous, analog, and compact, physically implementing an infinite-depth neural network. Moreover, the software-hardware co-design is intrinsically robust to analog noise. We experimentally validate our solution with 180 nm resistive memory in-memory computing macros. Demonstrating equivalent generative quality to the software baseline, our system achieved remarkable enhancements in generative speed for both unconditional and conditional generation tasks, by factors of 64.8 and 156.5, respectively. Moreover, it accomplished reductions in energy consumption by factors of 5.2 and 4.1. Our approach heralds a new horizon for hardware solutions in edge computing for generative AI applications.

MedIAnomaly: A comparative study of anomaly detection in medical images

Anomaly detection (AD) aims at detecting abnormal samples that deviate from the expected normal patterns. Generally, it can be trained on merely normal data without the requirement for abnormal samples, and thereby plays an important role in the recognition of rare diseases and health screening in the medical domain. Despite numerous related studies, we observe a lack of a fair and comprehensive evaluation, which causes some ambiguous conclusions and hinders the development of this field. This paper focuses on building a benchmark with unified implementation and comparison to address this problem. In particular, seven medical datasets with five image modalities, including chest X-rays, brain MRIs, retinal fundus images, dermatoscopic images, and histopathology whole slide images are organized for extensive evaluation. Twenty-seven typical AD methods, including reconstruction and self-supervised learning-based methods, are involved in comparison of image-level anomaly classification and pixel-level anomaly segmentation. Furthermore, we for the first time formally explore the effect of key components in existing methods, clearly revealing unresolved challenges and potential future directions. The datasets and code are available at \url{https://github.com/caiyu6666/MedIAnomaly}.

Genetic Quantization-Aware Approximation for Non-Linear Operations in Transformers

Non-linear functions are prevalent in Transformers and their lightweight variants, incurring substantial and frequently underestimated hardware costs. Previous state-of-the-art works optimize these operations by piece-wise linear approximation and store the parameters in look-up tables (LUT), but most of them require unfriendly high-precision arithmetics such as FP/INT 32 and lack consideration of integer-only INT quantization. This paper proposed a genetic LUT-Approximation algorithm namely GQA-LUT that can automatically determine the parameters with quantization awareness. The results demonstrate that GQA-LUT achieves negligible degradation on the challenging semantic segmentation task for both vanilla and linear Transformer models. Besides, proposed GQA-LUT enables the employment of INT8-based LUT-Approximation that achieves an area savings of 81.3~81.7% and a power reduction of 79.3~80.2% compared to the high-precision FP/INT 32 alternatives. Code is available at https:// github.com/PingchengDong/GQA-LUT.

SAMCT: Segment Any CT Allowing Labor-Free Task-Indicator Prompts

Segment anything model (SAM), a foundation model with superior versatility and generalization across diverse segmentation tasks, has attracted widespread attention in medical imaging. However, it has been proved that SAM would encounter severe performance degradation due to the lack of medical knowledge in training and local feature encoding. Though several SAM-based models have been proposed for tuning SAM in medical imaging, they still suffer from insufficient feature extraction and highly rely on high-quality prompts. In this paper, we construct a large CT dataset consisting of 1.1M CT images and 5M masks from public datasets and propose a powerful foundation model SAMCT allowing labor-free prompts. Specifically, based on SAM, SAMCT is further equipped with a U-shaped CNN image encoder, a cross-branch interaction module, and a task-indicator prompt encoder. The U-shaped CNN image encoder works in parallel with the ViT image encoder in SAM to supplement local features. Cross-branch interaction enhances the feature expression capability of the CNN image encoder and the ViT image encoder by exchanging global perception and local features from one to the other. The task-indicator prompt encoder is a plug-and-play component to effortlessly encode task-related indicators into prompt embeddings. In this way, SAMCT can work in an automatic manner in addition to the semi-automatic interactive strategy in SAM. Extensive experiments demonstrate the superiority of SAMCT against the state-of-the-art task-specific and SAM-based medical foundation models on various tasks. The code, data, and models are released at https://github.com/xianlin7/SAMCT.

Prompt-Guided Adaptive Model Transformation for Whole Slide Image Classification

Multiple instance learning (MIL) has emerged as a popular method for classifying histopathology whole slide images (WSIs). Existing approaches typically rely on frozen pre-trained models to extract instance features, neglecting the substantial domain shift between pre-training natural and histopathological images. To address this issue, we propose PAMT, a novel Prompt-guided Adaptive Model Transformation framework that enhances MIL classification performance by seamlessly adapting pre-trained models to the specific characteristics of histopathology data. To capture the intricate histopathology distribution, we introduce Representative Patch Sampling (RPS) and Prototypical Visual Prompt (PVP) to reform the input data, building a compact while informative representation. Furthermore, to narrow the domain gap, we introduce Adaptive Model Transformation (AMT) that integrates adapter blocks within the feature extraction pipeline, enabling the pre-trained models to learn domain-specific features. We rigorously evaluate our approach on two publicly available datasets, Camelyon16 and TCGA-NSCLC, showcasing substantial improvements across various MIL models. Our findings affirm the potential of PAMT to set a new benchmark in WSI classification, underscoring the value of a targeted reprogramming approach.

Rethinking Autoencoders for Medical Anomaly Detection from A Theoretical Perspective

Medical anomaly detection aims to identify abnormal findings using only normal training data, playing a crucial role in health screening and recognizing rare diseases. Reconstruction-based methods, particularly those utilizing autoencoders (AEs), are dominant in this field. They work under the assumption that AEs trained on only normal data cannot reconstruct unseen abnormal regions well, thereby enabling the anomaly detection based on reconstruction errors. However, this assumption does not always hold due to the mismatch between the reconstruction training objective and the anomaly detection task objective, rendering these methods theoretically unsound. This study focuses on providing a theoretical foundation for AE-based reconstruction methods in anomaly detection. By leveraging information theory, we elucidate the principles of these methods and reveal that the key to improving AE in anomaly detection lies in minimizing the information entropy of latent vectors. Experiments on four datasets with two image modalities validate the effectiveness of our theory. To the best of our knowledge, this is the first effort to theoretically clarify the principles and design philosophy of AE for anomaly detection. Code will be available upon acceptance.

Iterative Online Image Synthesis via Diffusion Model for Imbalanced Classification

Accurate and robust classification of diseases is important for proper diagnosis and treatment. However, medical datasets often face challenges related to limited sample sizes and inherent imbalanced distributions, due to difficulties in data collection and variations in disease prevalence across different types. In this paper, we introduce an Iterative Online Image Synthesis (IOIS) framework to address the class imbalance problem in medical image classification. Our framework incorporates two key modules, namely Online Image Synthesis (OIS) and Accuracy Adaptive Sampling (AAS), which collectively target the imbalance classification issue at both the instance level and the class level. The OIS module alleviates the data insufficiency problem by generating representative samples tailored for online training of the classifier. On the other hand, the AAS module dynamically balances the synthesized samples among various classes, targeting those with low training accuracy. To evaluate the effectiveness of our proposed method in addressing imbalanced classification, we conduct experiments on the HAM10000 and APTOS datasets. The results obtained demonstrate the superiority of our approach over state-of-the-art methods as well as the effectiveness of each component. The source code will be released upon acceptance.

DoRA: Weight-Decomposed Low-Rank Adaptation

Among the widely used parameter-efficient finetuning (PEFT) methods, LoRA and its variants have gained considerable popularity because of avoiding additional inference costs. However, there still often exists an accuracy gap between these methods and full fine-tuning (FT). In this work, we first introduce a novel weight decomposition analysis to investigate the inherent differences between FT and LoRA. Aiming to resemble the learning capacity of FT from the findings, we propose Weight-Decomposed LowRank Adaptation (DoRA). DoRA decomposes the pre-trained weight into two components, magnitude and direction, for fine-tuning, specifically employing LoRA for directional updates to efficiently minimize the number of trainable parameters. By employing DoRA, we enhance both the learning capacity and training stability of LoRA while avoiding any additional inference overhead. DoRA consistently outperforms LoRA on fine-tuning LLaMA, LLaVA, and VL-BART on various downstream tasks, such as commonsense reasoning, visual instruction tuning, and image/video-text understanding.

Boundary and Relation Distillation for Semantic Segmentation

Recently, it has been revealed that small semantic segmentation (SS) models exhibit a tendency to make errors in maintaining boundary region completeness and preserving target region connectivity, despite their effective segmentation of the main object regions. To address these errors, we propose a targeted boundary and relation distillation (BRD) strategy using knowledge distillation from large teacher models to small student models. Specifically, the boundary distillation extracts explicit object boundaries from the hierarchical feature maps of the backbone network, subsequently enhancing the student model's mask quality in boundary regions. Concurrently, the relation distillation transfers implicit relations from the teacher model to the student model using pixel-level self-relation as a bridge, ensuring that the student's mask has strong target region connectivity. The proposed BRD is designed concretely for SS and is characterized by simplicity and efficiency. Through experimental evaluations on multiple SS datasets, including Pascal VOC 2012, Cityscapes, ADE20K, and COCO-Stuff 10K, we demonstrated that BRD significantly surpasses the current methods without increasing the inference costs, generating crisp region boundaries and smooth connecting regions that are challenging for small models.

BoNuS: Boundary Mining for Nuclei Segmentation with Partial Point Labels

Nuclei segmentation is a fundamental prerequisite in the digital pathology workflow. The development of automated methods for nuclei segmentation enables quantitative analysis of the wide existence and large variances in nuclei morphometry in histopathology images. However, manual annotation of tens of thousands of nuclei is tedious and time-consuming, which requires significant amount of human effort and domain-specific expertise. To alleviate this problem, in this paper, we propose a weakly-supervised nuclei segmentation method that only requires partial point labels of nuclei. Specifically, we propose a novel boundary mining framework for nuclei segmentation, named BoNuS, which simultaneously learns nuclei interior and boundary information from the point labels. To achieve this goal, we propose a novel boundary mining loss, which guides the model to learn the boundary information by exploring the pairwise pixel affinity in a multiple-instance learning manner. Then, we consider a more challenging problem, i.e., partial point label, where we propose a nuclei detection module with curriculum learning to detect the missing nuclei with prior morphological knowledge. The proposed method is validated on three public datasets, MoNuSeg, CPM, and CoNIC datasets. Experimental results demonstrate the superior performance of our method to the state-of-the-art weakly-supervised nuclei segmentation methods. Code: https://github.com/hust-linyi/bonus.