RePrompT: Recurrent Prompt Tuning for Integrating Structured EHR Encoders with Large Language Models

Large Language Models (LLMs) have shown strong promise for mining Electronic Health Records (EHRs) by reasoning over longitudinal clinical information to capture context-rich patient trajectories. However, leveraging LLMs for structured EHRs (e.g., standardized diagnosis and medication codes) presents two key challenges. First, translating time-stamped EHR sequences into plain text can obscure both temporal structure and code identities, weakening the ability to capture code co-occurrence and longitudinal regularities. Second, unlike cohort-trained predictive models that learn a shared, task-aligned representation space across patients, LLMs are often applied in a case-isolated inference setting where each patient is processed independently without leveraging population-level patterns. To address these challenges, we introduce RePrompT, a time-aware LLM framework that integrates structured EHR encoders through prompt tuning, without modifying underlying architectures. Specifically, RePrompT recurrently incorporates latent states from prior visits to preserve longitudinal information, and injects population-level information through trainable prompt tokens derived from a cohort-trained, task-aligned EHR encoder. Experiments on MIMIC-III and MIMIC-IV demonstrate that RePrompT consistently outperforms both EHR-based and LLM-based baselines across multiple clinical prediction tasks.

Text-Attributed Knowledge Graph Enrichment with Large Language Models for Medical Concept Representation

In electronic health record (EHR) mining, learning high-quality representations of medical concepts (e.g., standardized diagnosis, medication, and procedure codes) is fundamental for downstream clinical prediction. However, robust concept representation learning is hindered by two key challenges: (i) clinically important cross-type dependencies (e.g., diagnosis-medication and medication-procedure relations) are often missing or incomplete in existing ontology resources, limiting the ability to model complex EHR patterns; and (ii) rich clinical semantics are often missing from structured resources, and even when available as text, are difficult to integrate with KG structure for representation learning. To address these challenges, we present CoMed, an LLM-empowered graph learning framework for medical concept representation. CoMed first builds a global knowledge graph (KG) over medical codes by combining statistically reliable associations mined from EHRs with type-constrained LLM prompting to infer semantic relations. It then utilizes LLMs to enrich the KG into a text-attributed graph by generating node descriptions and edge rationales, providing semantic signals for both concepts and their relationships. Finally, CoMed jointly trains a LoRA-tuned LLaMA text encoder with a heterogeneous GNN, fusing text semantics and graph structure into unified concept embeddings. Extensive experiments on MIMIC-III and MIMIC-IV show that CoMed consistently improves prediction performance and serves as an effective plug-in concept encoder for standard EHR pipelines.

Neural Structure Embedding for Symbolic Regression via Continuous Structure Search and Coefficient Optimization

Symbolic regression aims to discover human-interpretable equations that explain observational data. However, existing approaches rely heavily on discrete structure search (e.g., genetic programming), which often leads to high computational cost, unstable performance, and limited scalability to large equation spaces. To address these challenges, we propose SRCO, a unified embedding-driven framework for symbolic regression that transforms symbolic structures into a continuous, optimizable representation space. The framework consists of three key components: (1) structure embedding: we first generate a large pool of exploratory equations using traditional symbolic regression algorithms and train a Transformer model to compress symbolic structures into a continuous embedding space; (2) continuous structure search: the embedding space enables efficient exploration using gradient-based or sampling-based optimization, significantly reducing the cost of navigating the combinatorial structure space; and (3) coefficient optimization: for each discovered structure, we treat symbolic coefficients as learnable parameters and apply gradient optimization to obtain accurate numerical values. Experiments on synthetic and real-world datasets show that our approach consistently outperforms state-of-the-art methods in equation accuracy, robustness, and search efficiency. This work introduces a new paradigm for symbolic regression by bridging symbolic equation discovery with continuous embedding learning and optimization.

Mitigating Shortcut Reasoning in Language Models: A Gradient-Aware Training Approach

Large language models exhibit strong reasoning capabilities, yet often rely on shortcuts such as surface pattern matching and answer memorization rather than genuine logical inference. We propose Shortcut-Aware Reasoning Training (SART), a gradient-aware framework that detects and mitigates shortcut-promoting samples via ShortcutScore and gradient surgery. Our method identifies shortcut signals through gradient misalignment with validation objectives and answer-token concentration, and modifies training dynamics accordingly. Experiments on controlled reasoning benchmarks show that SART achieves +16.5% accuracy and +40.2% robustness over the strongest baseline, significantly improving generalization under distribution shifts. Code is available at: https://github.com/fuyanjie/short-cut-aware-data-centric-reasoning.

AgentOS: From Application Silos to a Natural Language-Driven Data Ecosystem

The rapid emergence of open-source, locally hosted intelligent agents marks a critical inflection point in human-computer interaction. Systems such as OpenClaw demonstrate that Large Language Model (LLM)-based agents can autonomously operate local computing environments, orchestrate workflows, and integrate external tools. However, within the current paradigm, these agents remain conventional applications running on legacy operating systems originally designed for Graphical User Interfaces (GUIs) or Command Line Interfaces (CLIs). This architectural mismatch leads to fragmented interaction models, poorly structured permission management (often described as "Shadow AI"), and severe context fragmentation. This paper proposes a new paradigm: a Personal Agent Operating System (AgentOS). In AgentOS, traditional GUI desktops are replaced by a Natural User Interface (NUI) centered on a unified natural language or voice portal. The system core becomes an Agent Kernel that interprets user intent, decomposes tasks, and coordinates multiple agents, while traditional applications evolve into modular Skills-as-Modules enabling users to compose software through natural language rules. We argue that realizing AgentOS fundamentally becomes a Knowledge Discovery and Data Mining (KDD) problem. The Agent Kernel must operate as a real-time engine for intent mining and knowledge discovery. Viewed through this lens, the operating system becomes a continuous data mining pipeline involving sequential pattern mining for workflow automation, recommender systems for skill retrieval, and dynamically evolving personal knowledge graphs. These challenges define a new research agenda for the KDD community in building the next generation of intelligent computing systems.

Sim2Act: Robust Simulation-to-Decision Learning via Adversarial Calibration and Group-Relative Perturbation

Simulation-to-decision learning enables safe policy training in digital environments without risking real-world deployment, and has become essential in mission-critical domains such as supply chains and industrial systems. However, simulators learned from noisy or biased real-world data often exhibit prediction errors in decision-critical regions, leading to unstable action ranking and unreliable policies. Existing approaches either focus on improving average simulation fidelity or adopt conservative regularization, which may cause policy collapse by discarding high-risk high-reward actions. We propose Sim2Act, a robust simulation-to-decision framework that addresses both simulator and policy robustness. First, we introduce an adversarial calibration mechanism that re-weights simulation errors in decision-critical state-action pairs to align surrogate fidelity with downstream decision impact. Second, we develop a group-relative perturbation strategy that stabilizes policy learning under simulator uncertainty without enforcing overly pessimistic constraints. Extensive experiments on multiple supply chain benchmarks demonstrate improved simulation robustness and more stable decision performance under structured and unstructured perturbations.

City Editing: Hierarchical Agentic Execution for Dependency-Aware Urban Geospatial Modification

As cities evolve over time, challenges such as traffic congestion and functional imbalance increasingly necessitate urban renewal through efficient modification of existing plans, rather than complete re-planning. In practice, even minor urban changes require substantial manual effort to redraw geospatial layouts, slowing the iterative planning and decision-making procedure. Motivated by recent advances in agentic systems and multimodal reasoning, we formulate urban renewal as a machine-executable task that iteratively modifies existing urban plans represented in structured geospatial formats. More specifically, we represent urban layouts using GeoJSON and decompose natural-language editing instructions into hierarchical geometric intents spanning polygon-, line-, and point-level operations. To coordinate interdependent edits across spatial elements and abstraction levels, we propose a hierarchical agentic framework that jointly performs multi-level planning and execution with explicit propagation of intermediate spatial constraints. We further introduce an iterative execution-validation mechanism that mitigates error accumulation and enforces global spatial consistency during multi-step editing. Extensive experiments across diverse urban editing scenarios demonstrate significant improvements in efficiency, robustness, correctness, and spatial validity over existing baselines.

Robust and Efficient Tool Orchestration via Layered Execution Structures with Reflective Correction

Tool invocation is a core capability of agentic systems, yet failures often arise not from individual tool calls but from how multiple tools are organized and executed together. Existing approaches tightly couple tool execution with stepwise language reasoning or explicit planning, leading to brittle behavior and high execution overhead. To overcome these limitations, we revisit tool invocation from the perspective of tool orchestration. Our key insight is that effective orchestration does not require precise dependency graphs or fine-grained planning. Instead, a coarse-grained layer structure suffices to provide global guidance, while execution-time errors can be corrected locally. Specifically, we model tool orchestration as learning a layered execution structure that captures high-level tool dependencies, inducing layer-wise execution through context constraints. To handle execution-time failures, we introduce a schema-aware reflective correction mechanism that detects and repairs errors locally. This design confines errors to individual tool calls and avoids re-planning entire execution trajectories. This structured execution paradigm enables a lightweight and reusable orchestration component for agentic systems. Experimental results show that our approach achieves robust tool execution while reducing execution complexity and overhead. Code will be made publicly available.

User-Adaptive Meta-Learning for Cold-Start Medication Recommendation with Uncertainty Filtering

Large-scale Electronic Health Record (EHR) databases have become indispensable in supporting clinical decision-making through data-driven treatment recommendations. However, existing medication recommender methods often struggle with a user (i.e., patient) cold-start problem, where recommendations for new patients are usually unreliable due to the lack of sufficient prescription history for patient profiling. While prior studies have utilized medical knowledge graphs to connect medication concepts through pharmacological or chemical relationships, these methods primarily focus on mitigating the item cold-start issue and fall short in providing personalized recommendations that adapt to individual patient characteristics. Meta-learning has shown promise in handling new users with sparse interactions in recommender systems. However, its application to EHRs remains underexplored due to the unique sequential structure of EHR data. To tackle these challenges, we propose MetaDrug, a multi-level, uncertainty-aware meta-learning framework designed to address the patient cold-start problem in medication recommendation. MetaDrug proposes a novel two-level meta-adaptation mechanism, including self-adaptation, which adapts the model to new patients using their own medical events as support sets to capture temporal dependencies; and peer-adaptation, which adapts the model using similar visits from peer patients to enrich new patient representations. Meanwhile, to further improve meta-adaptation outcomes, we introduce an uncertainty quantification module that ranks the support visits and filters out the unrelated information for adaptation consistency. We evaluate our approach on the MIMIC-III and Acute Kidney Injury (AKI) datasets. Experimental results on both datasets demonstrate that MetaDrug consistently outperforms state-of-the-art medication recommendation methods on cold-start patients.

Kernel Alignment-based Multi-view Unsupervised Feature Selection with Sample-level Adaptive Graph Learning

Although multi-view unsupervised feature selection (MUFS) has demonstrated success in dimensionality reduction for unlabeled multi-view data, most existing methods reduce feature redundancy by focusing on linear correlations among features but often overlook complex nonlinear dependencies. This limits the effectiveness of feature selection. In addition, existing methods fuse similarity graphs from multiple views by employing sample-invariant weights to preserve local structure. However, this process fails to account for differences in local neighborhood clarity among samples within each view, thereby hindering accurate characterization of the intrinsic local structure of the data. In this paper, we propose a Kernel Alignment-based multi-view unsupervised FeatUre selection with Sample-level adaptive graph lEarning method (KAFUSE) to address these issues. Specifically, we first employ kernel alignment with an orthogonal constraint to reduce feature redundancy in both linear and nonlinear relationships. Then, a cross-view consistent similarity graph is learned by applying sample-level fusion to each slice of a tensor formed by stacking similarity graphs from different views, which automatically adjusts the view weights for each sample during fusion. These two steps are integrated into a unified model for feature selection, enabling mutual enhancement between them. Extensive experiments on real multi-view datasets demonstrate the superiority of KAFUSE over state-of-the-art methods.