TokEye: Fast Signal Extraction for Fluctuating Time Series via Offline Self-Supervised Learning From Fusion Diagnostics to Bioacoustics

Next-generation fusion facilities like ITER face a "data deluge," generating petabytes of multi-diagnostic signals daily that challenge manual analysis. We present a "signals-first" self-supervised framework for the automated extraction of coherent and transient modes from high-noise time-frequency data across a variety of sensors. We also develop a general-purpose method and tool for extracting coherent, quasi-coherent, and transient modes for fluctuation measurements in tokamaks by employing non-linear optimal techniques in multichannel signal processing with a fast neural network surrogate on fast magnetics, electron cyclotron emission, CO2 interferometers, and beam emission spectroscopy measurements from DIII-D. Results are tested on data from DIII-D, TJ-II, and non-fusion spectrograms. With an inference latency of 0.5 seconds, this framework enables real-time mode identification and large-scale automated database generation for advanced plasma control. Repository is in https://github.com/PlasmaControl/TokEye.

FaultXformer: A Transformer-Encoder Based Fault Classification and Location Identification model in PMU-Integrated Active Electrical Distribution System

Accurate fault detection and localization in electrical distribution systems is crucial, especially with the increasing integration of distributed energy resources (DERs), which inject greater variability and complexity into grid operations. In this study, FaultXformer is proposed, a Transformer encoder-based architecture developed for automatic fault analysis using real-time current data obtained from phasor measurement unit (PMU). The approach utilizes time-series current data to initially extract rich temporal information in stage 1, which is crucial for identifying the fault type and precisely determining its location across multiple nodes. In Stage 2, these extracted features are processed to differentiate among distinct fault types and identify the respective fault location within the distribution system. Thus, this dual-stage transformer encoder pipeline enables high-fidelity representation learning, considerably boosting the performance of the work. The model was validated on a dataset generated from the IEEE 13-node test feeder, simulated with 20 separate fault locations and several DER integration scenarios, utilizing current measurements from four strategically located PMUs. To demonstrate robust performance evaluation, stratified 10-fold cross-validation is performed. FaultXformer achieved average accuracies of 98.76% in fault type classification and 98.92% in fault location identification across cross-validation, consistently surpassing conventional deep learning baselines convolutional neural network (CNN), recurrent neural network (RNN). long short-term memory (LSTM) by 1.70%, 34.95%, and 2.04% in classification accuracy and by 10.82%, 40.89%, and 6.27% in location accuracy, respectively. These results demonstrate the efficacy of the proposed model with significant DER penetration.

The Chebyshev Polynomial Series Frequency Modulation Model for Waveform Design and Analysis

Polynomial phase signals (PPS) are a staple of waveform design and analysis in sonar, radar, and communications fields. They also find application in the modeling of bioacoustic emissions, especially those of echolocating animals such as bats and odontocetes. This work presents a novel PPS waveform formulation that exploits some special properties of Chebyshev polynomials, such as orthogonality, recurrence relations, and equivalence to trigonometric functions. The result is the Chebyshev Polynomial Frequency Modulation (CPSFM) family of waveforms, which prove useful in the modeling of bioacoustic signals and the approximation of non-polynomial-phase signals such as hyperbolic chirps. We demonstrate that the CPSFM model admits compact analytic expressions for fundamental continuous-time signal processing functions such as the Fourier transform, the convolution and correlation operations, and the ambiguity function. Derivations for these expressions using CPSFM are presented, along with their application to the analysis of biosonar emissions of Mexican free-tailed bats.

RhythmBERT: A Self-Supervised Language Model Based on Latent Representations of ECG Waveforms for Heart Disease Detection

Electrocardiogram (ECG) analysis is crucial for diagnosing heart disease, but most self-supervised learning methods treat ECG as a generic time series, overlooking physiologic semantics and rhythm-level structure. Existing contrastive methods utilize augmentations that distort morphology, whereas generative approaches employ fixed-window segmentation, which misaligns cardiac cycles. To address these limitations, we propose RhythmBERT, a generative ECG language model that considers ECG as a language paradigm by encoding P, QRS, and T segments into symbolic tokens via autoencoder-based latent representations. These discrete tokens capture rhythm semantics, while complementary continuous embeddings retain fine-grained morphology, enabling a unified view of waveform structure and rhythm. RhythmBERT is pretrained on approximately 800,000 unlabeled ECG recordings with a masked prediction objective, allowing it to learn contextual representations in a label-efficient manner. Evaluations show that despite using only a single lead, RhythmBERT achieves comparable or superior performance to strong 12-lead baselines. This generalization extends from prevalent conditions such as atrial fibrillation to clinically challenging cases such as subtle ST-T abnormalities and myocardial infarction. Our results suggest that considering ECG as structured language offers a scalable and physiologically aligned pathway for advancing cardiac analysis.

Augmenting representations with scientific papers

Astronomers have acquired vast repositories of multimodal data, including images, spectra, and time series, complemented by decades of literature that analyzes astrophysical sources. Still, these data sources are rarely systematically integrated. This work introduces a contrastive learning framework designed to align X-ray spectra with domain knowledge extracted from scientific literature, facilitating the development of shared multimodal representations. Establishing this connection is inherently complex, as scientific texts encompass a broader and more diverse physical context than spectra. We propose a contrastive pipeline that achieves a 20% Recall@1% when retrieving texts from spectra, proving that a meaningful alignment between these modalities is not only possible but capable of accelerating the interpretation of rare or poorly understood sources. Furthermore, the resulting shared latent space effectively encodes physically significant information. By fusing spectral and textual data, we improve the estimation of 20 physical variables by 16-18% over unimodal spectral baselines. Our results indicate that a Mixture of Experts (MoE) strategy, which leverages both unimodal and shared representations, yields superior performance. Finally, outlier analysis within the multimodal latent space identifies high-priority targets for follow-up investigation, including a candidate pulsating ULX (PULX) and a gravitational lens system. Importantly, this framework can be extended to other scientific domains where aligning observational data with existing literature is possible.

A Data-Driven Approach to Support Clinical Renal Replacement Therapy

This study investigates a data-driven machine learning approach to predict membrane fouling in critically ill patients undergoing Continuous Renal Replacement Therapy (CRRT). Using time-series data from an ICU, 16 clinically selected features were identified to train predictive models. To ensure interpretability and enable reliable counterfactual analysis, the researchers adopted a tabular data approach rather than modeling temporal dependencies directly. Given the imbalance between fouling and non-fouling cases, the ADASYN oversampling technique was applied to improve minority class representation. Random Forest, XGBoost, and LightGBM models were tested, achieving balanced performance with 77.6% sensitivity and 96.3% specificity at a 10% rebalancing rate. Results remained robust across different forecasting horizons. Notably, the tabular approach outperformed LSTM recurrent neural networks, suggesting that explicit temporal modeling was not necessary for strong predictive performance. Feature selection further reduced the model to five key variables, improving simplicity and interpretability with minimal loss of accuracy. A Shapley value-based counterfactual analysis was applied to the best-performing model, successfully identifying minimal input changes capable of reversing fouling predictions. Overall, the findings support the viability of interpretable machine learning models for predicting membrane fouling during CRRT. The integration of prediction and counterfactual analysis offers practical clinical value, potentially guiding therapeutic adjustments to reduce fouling risk and improve patient management.

EXCODER: EXplainable Classification Of DiscretE time series Representations

Deep learning has significantly improved time series classification, yet the lack of explainability in these models remains a major challenge. While Explainable AI (XAI) techniques aim to make model decisions more transparent, their effectiveness is often hindered by the high dimensionality and noise present in raw time series data. In this work, we investigate whether transforming time series into discrete latent representations-using methods such as Vector Quantized Variational Autoencoders (VQ-VAE) and Discrete Variational Autoencoders (DVAE)-not only preserves but enhances explainability by reducing redundancy and focusing on the most informative patterns. We show that applying XAI methods to these compressed representations leads to concise and structured explanations that maintain faithfulness without sacrificing classification performance. Additionally, we propose Similar Subsequence Accuracy (SSA), a novel metric that quantitatively assesses the alignment between XAI-identified salient subsequences and the label distribution in the training data. SSA provides a systematic way to validate whether the features highlighted by XAI methods are truly representative of the learned classification patterns. Our findings demonstrate that discrete latent representations not only retain the essential characteristics needed for classification but also offer a pathway to more compact, interpretable, and computationally efficient explanations in time series analysis.

Multivariate time-series forecasting of ASTRI-Horn monitoring data: A Normal Behavior Model

This study presents a Normal Behavior Model (NBM) developed to forecast monitoring time-series data from the ASTRI-Horn Cherenkov telescope under normal operating conditions. The analysis focused on 15 physical variables acquired by the Telescope Control Unit between September 2022 and July 2024, representing sensor measurements from the Azimuth and Elevation motors. After data cleaning, resampling, feature selection, and correlation analysis, the dataset was segmented into fixed-length intervals, in which the first I samples represented the input sequence provided to the model, while the forecast length, T, indicated the number of future time steps to be predicted. A sliding-window technique was then applied to increase the number of intervals. A Multi-Layer Perceptron (MLP) was trained to perform multivariate forecasting across all features simultaneously. Model performance was evaluated using the Mean Squared Error (MSE) and the Normalized Median Absolute Deviation (NMAD), and it was also benchmarked against a Long Short-Term Memory (LSTM) network. The MLP model demonstrated consistent results across different features and I-T configurations, and matched the performance of the LSTM while converging faster. It achieved an MSE of 0.019+/-0.003 and an NMAD of 0.032+/-0.009 on the test set under its best configuration (4 hidden layers, 720 units per layer, and I-T lengths of 300 samples each, corresponding to 5 hours at 1-minute resolution). Extending the forecast horizon up to 6.5 hours-the maximum allowed by this configuration-did not degrade performance, confirming the model's effectiveness in providing reliable hour-scale predictions. The proposed NBM provides a powerful tool for enabling early anomaly detection in online ASTRI-Horn monitoring time series, offering a basis for the future development of a prognostics and health management system that supports predictive maintenance.

Multi-scale hypergraph meets LLMs: Aligning large language models for time series analysis

Recently, there has been great success in leveraging pre-trained large language models (LLMs) for time series analysis. The core idea lies in effectively aligning the modality between natural language and time series. However, the multi-scale structures of natural language and time series have not been fully considered, resulting in insufficient utilization of LLMs capabilities. To this end, we propose MSH-LLM, a Multi-Scale Hypergraph method that aligns Large Language Models for time series analysis. Specifically, a hyperedging mechanism is designed to enhance the multi-scale semantic information of time series semantic space. Then, a cross-modality alignment (CMA) module is introduced to align the modality between natural language and time series at different scales. In addition, a mixture of prompts (MoP) mechanism is introduced to provide contextual information and enhance the ability of LLMs to understand the multi-scale temporal patterns of time series. Experimental results on 27 real-world datasets across 5 different applications demonstrate that MSH-LLM achieves the state-of-the-art results.

Be Wary of Your Time Series Preprocessing

Normalization and scaling are fundamental preprocessing steps in time series modeling, yet their role in Transformer-based models remains underexplored from a theoretical perspective. In this work, we present the first formal analysis of how different normalization strategies, specifically instance-based and global scaling, impact the expressivity of Transformer-based architectures for time series representation learning. We propose a novel expressivity framework tailored to time series, which quantifies a model's ability to distinguish between similar and dissimilar inputs in the representation space. Using this framework, we derive theoretical bounds for two widely used normalization methods: Standard and Min-Max scaling. Our analysis reveals that the choice of normalization strategy can significantly influence the model's representational capacity, depending on the task and data characteristics. We complement our theory with empirical validation on classification and forecasting benchmarks using multiple Transformer-based models. Our results show that no single normalization method consistently outperforms others, and in some cases, omitting normalization entirely leads to superior performance. These findings highlight the critical role of preprocessing in time series learning and motivate the need for more principled normalization strategies tailored to specific tasks and datasets.