Automatic Sleep Stage Classification with Cross-modal Self-supervised Features from Deep Brain Signals

The detection of human sleep stages is widely used in the diagnosis and intervention of neurological and psychiatric diseases. Some patients with deep brain stimulator implanted could have their neural activities recorded from the deep brain. Sleep stage classification based on deep brain recording has great potential to provide more precise treatment for patients. The accuracy and generalizability of existing sleep stage classifiers based on local field potentials are still limited. We proposed an applicable cross-modal transfer learning method for sleep stage classification with implanted devices. This end-to-end deep learning model contained cross-modal self-supervised feature representation, self-attention, and classification framework. We tested the model with deep brain recording data from 12 patients with Parkinson's disease. The best total accuracy reached 83.2% for sleep stage classification. Results showed speech self-supervised features catch the conversion pattern of sleep stages effectively. We provide a new method on transfer learning from acoustic signals to local field potentials. This method supports an effective solution for the insufficient scale of clinical data. This sleep stage classification model could be adapted to chronic and continuous monitor sleep for Parkinson's patients in daily life, and potentially utilized for more precise treatment in deep brain-machine interfaces, such as closed-loop deep brain stimulation.

Parkinsonian Chinese Speech Analysis towards Automatic Classification of Parkinson's Disease

Speech disorders often occur at the early stage of Parkinson's disease (PD). The speech impairments could be indicators of the disorder for early diagnosis, while motor symptoms are not obvious. In this study, we constructed a new speech corpus of Mandarin Chinese and addressed classification of patients with PD. We implemented classical machine learning methods with ranking algorithms for feature selection, convolutional and recurrent deep networks, and an end to end system. Our classification accuracy significantly surpassed state-of-the-art studies. The result suggests that free talk has stronger classification power than standard speech tasks, which could help the design of future speech tasks for efficient early diagnosis of the disease. Based on existing classification methods and our natural speech study, the automatic detection of PD from daily conversation could be accessible to the majority of the clinical population.

Deepfakes for Medical Video De-Identification: Privacy Protection and Diagnostic Information Preservation

Data sharing for medical research has been difficult as open-sourcing clinical data may violate patient privacy. Traditional methods for face de-identification wipe out facial information entirely, making it impossible to analyze facial behavior. Recent advancements on whole-body keypoints detection also rely on facial input to estimate body keypoints. Both facial and body keypoints are critical in some medical diagnoses, and keypoints invariability after de-identification is of great importance. Here, we propose a solution using deepfake technology, the face swapping technique. While this swapping method has been criticized for invading privacy and portraiture right, it could conversely protect privacy in medical video: patients' faces could be swapped to a proper target face and become unrecognizable. However, it remained an open question that to what extent the swapping de-identification method could affect the automatic detection of body keypoints. In this study, we apply deepfake technology to Parkinson's disease examination videos to de-identify subjects, and quantitatively show that: face-swapping as a de-identification approach is reliable, and it keeps the keypoints almost invariant, significantly better than traditional methods. This study proposes a pipeline for video de-identification and keypoint preservation, clearing up some ethical restrictions for medical data sharing. This work could make open-source high quality medical video datasets more feasible and promote future medical research that benefits our society.