Ohio State University, USA
Abstract:Large Reasoning Models (LRMs) have demonstrated impressive capabilities but suffer from cognitive inefficiencies like ``overthinking'' simple problems and ``underthinking'' complex ones. While existing methods that use supervised fine-tuning~(SFT) or reinforcement learning~(RL) with token-length rewards can improve efficiency, they often do so at the cost of accuracy. This paper introduces \textbf{DeepCompress}, a novel framework that simultaneously enhances both the accuracy and efficiency of LRMs. We challenge the prevailing approach of consistently favoring shorter reasoning paths, showing that longer responses can contain a broader range of correct solutions for difficult problems. DeepCompress employs an adaptive length reward mechanism that dynamically classifies problems as ``Simple'' or ``Hard'' in real-time based on the model's evolving capability. It encourages shorter, more efficient reasoning for ``Simple'' problems while promoting longer, more exploratory thought chains for ``Hard'' problems. This dual-reward strategy enables the model to autonomously adjust its Chain-of-Thought (CoT) length, compressing reasoning for well-mastered problems and extending it for those it finds challenging. Experimental results on challenging mathematical benchmarks show that DeepCompress consistently outperforms baseline methods, achieving superior accuracy while significantly improving token efficiency.
Abstract:The "end-to-end" label for LLMs is a misnomer. In practice, they depend on a non-differentiable decoding process that requires laborious, hand-tuning of hyperparameters like temperature and top-p. This paper introduces AutoDeco, a novel architecture that enables truly "end-to-end" generation by learning to control its own decoding strategy. We augment the standard transformer with lightweight heads that, at each step, dynamically predict context-specific temperature and top-p values alongside the next-token logits. This approach transforms decoding into a parametric, token-level process, allowing the model to self-regulate its sampling strategy within a single forward pass. Through extensive experiments on eight benchmarks, we demonstrate that AutoDeco not only significantly outperforms default decoding strategies but also achieves performance comparable to an oracle-tuned baseline derived from "hacking the test set"-a practical upper bound for any static method. Crucially, we uncover an emergent capability for instruction-based decoding control: the model learns to interpret natural language commands (e.g., "generate with low randomness") and adjusts its predicted temperature and top-p on a token-by-token basis, opening a new paradigm for steerable and interactive LLM decoding.
Abstract:Retrieval-Augmented Generation (RAG) systems enable large language models (LLMs) instant access to relevant information for the generative process, demonstrating their superior performance in addressing common LLM challenges such as hallucination, factual inaccuracy, and the knowledge cutoff. Graph-based RAG further extends this paradigm by incorporating knowledge graphs (KGs) to leverage rich, structured connections for more precise and inferential responses. A critical challenge, however, is that most Graph-based RAG systems rely on LLMs for automated KG construction, often yielding noisy KGs with redundant entities and unreliable relationships. This noise degrades retrieval and generation performance while also increasing computational cost. Crucially, current research does not comprehensively address the denoising problem for LLM-generated KGs. In this paper, we introduce DEnoised knowledge Graphs for Retrieval Augmented Generation (DEG-RAG), a framework that addresses these challenges through: (1) entity resolution, which eliminates redundant entities, and (2) triple reflection, which removes erroneous relations. Together, these techniques yield more compact, higher-quality KGs that significantly outperform their unprocessed counterparts. Beyond the methods, we conduct a systematic evaluation of entity resolution for LLM-generated KGs, examining different blocking strategies, embedding choices, similarity metrics, and entity merging techniques. To the best of our knowledge, this is the first comprehensive exploration of entity resolution in LLM-generated KGs. Our experiments demonstrate that this straightforward approach not only drastically reduces graph size but also consistently improves question answering performance across diverse popular Graph-based RAG variants.
Abstract:Large Language Models (LLMs) have recently advanced the field of Automated Theorem Proving (ATP), attaining substantial performance gains through widely adopted test-time scaling strategies, notably reflective Chain-of-Thought (CoT) reasoning and increased sampling passes. However, they both introduce significant computational overhead for inference. Moreover, existing cost analyses typically regulate only the number of sampling passes, while neglecting the substantial disparities in sampling costs introduced by different scaling strategies. In this paper, we systematically compare the efficiency of different test-time scaling strategies for ATP models and demonstrate the inefficiency of the current state-of-the-art (SOTA) open-source approaches. We then investigate approaches to significantly reduce token usage and sample passes while maintaining the original performance. Specifically, we propose two complementary methods that can be integrated into a unified EconRL pipeline for amplified benefits: (1) a dynamic Chain-of-Thought (CoT) switching mechanism designed to mitigate unnecessary token consumption, and (2) Diverse parallel-scaled reinforcement learning (RL) with trainable prefixes to enhance pass rates under constrained sampling passes. Experiments on miniF2F and ProofNet demonstrate that our EconProver achieves comparable performance to baseline methods with only 12% of the computational cost. This work provides actionable insights for deploying lightweight ATP models without sacrificing performance.
Abstract:Traditional backdoor attacks in federated learning (FL) operate within constrained attack scenarios, as they depend on visible triggers and require physical modifications to the target object, which limits their practicality. To address this limitation, we introduce a novel backdoor attack prototype for FL called the out-of-distribution (OOD) backdoor attack ($\mathtt{OBA}$), which uses OOD data as both poisoned samples and triggers simultaneously. Our approach significantly broadens the scope of backdoor attack scenarios in FL. To improve the stealthiness of $\mathtt{OBA}$, we propose $\mathtt{SoDa}$, which regularizes both the magnitude and direction of malicious local models during local training, aligning them closely with their benign versions to evade detection. Empirical results demonstrate that $\mathtt{OBA}$ effectively circumvents state-of-the-art defenses while maintaining high accuracy on the main task. To address this security vulnerability in the FL system, we introduce $\mathtt{BNGuard}$, a new server-side defense method tailored against $\mathtt{SoDa}$. $\mathtt{BNGuard}$ leverages the observation that OOD data causes significant deviations in the running statistics of batch normalization layers. This allows $\mathtt{BNGuard}$ to identify malicious model updates and exclude them from aggregation, thereby enhancing the backdoor robustness of FL. Extensive experiments across various settings show the effectiveness of $\mathtt{BNGuard}$ on defending against $\mathtt{SoDa}$. The code is available at https://github.com/JiiahaoXU/SoDa-BNGuard.




Abstract:Scientific Large Language Models (Sci-LLMs) are transforming how knowledge is represented, integrated, and applied in scientific research, yet their progress is shaped by the complex nature of scientific data. This survey presents a comprehensive, data-centric synthesis that reframes the development of Sci-LLMs as a co-evolution between models and their underlying data substrate. We formulate a unified taxonomy of scientific data and a hierarchical model of scientific knowledge, emphasizing the multimodal, cross-scale, and domain-specific challenges that differentiate scientific corpora from general natural language processing datasets. We systematically review recent Sci-LLMs, from general-purpose foundations to specialized models across diverse scientific disciplines, alongside an extensive analysis of over 270 pre-/post-training datasets, showing why Sci-LLMs pose distinct demands -- heterogeneous, multi-scale, uncertainty-laden corpora that require representations preserving domain invariance and enabling cross-modal reasoning. On evaluation, we examine over 190 benchmark datasets and trace a shift from static exams toward process- and discovery-oriented assessments with advanced evaluation protocols. These data-centric analyses highlight persistent issues in scientific data development and discuss emerging solutions involving semi-automated annotation pipelines and expert validation. Finally, we outline a paradigm shift toward closed-loop systems where autonomous agents based on Sci-LLMs actively experiment, validate, and contribute to a living, evolving knowledge base. Collectively, this work provides a roadmap for building trustworthy, continually evolving artificial intelligence (AI) systems that function as a true partner in accelerating scientific discovery.
Abstract:Surgical site infection (SSI) is one of the most common and costly healthcare-associated infections and and surgical wound care remains a significant clinical challenge in preventing SSIs and improving patient outcomes. While recent studies have explored the use of deep learning for preliminary surgical wound screening, progress has been hindered by concerns over data privacy and the high costs associated with expert annotation. Currently, no publicly available dataset or benchmark encompasses various types of surgical wounds, resulting in the absence of an open-source Surgical-Wound screening tool. To address this gap: (1) we present SurgWound, the first open-source dataset featuring a diverse array of surgical wound types. It contains 697 surgical wound images annotated by 3 professional surgeons with eight fine-grained clinical attributes. (2) Based on SurgWound, we introduce the first benchmark for surgical wound diagnosis, which includes visual question answering (VQA) and report generation tasks to comprehensively evaluate model performance. (3) Furthermore, we propose a three-stage learning framework, WoundQwen, for surgical wound diagnosis. In the first stage, we employ five independent MLLMs to accurately predict specific surgical wound characteristics. In the second stage, these predictions serve as additional knowledge inputs to two MLLMs responsible for diagnosing outcomes, which assess infection risk and guide subsequent interventions. In the third stage, we train a MLLM that integrates the diagnostic results from the previous two stages to produce a comprehensive report. This three-stage framework can analyze detailed surgical wound characteristics and provide subsequent instructions to patients based on surgical images, paving the way for personalized wound care, timely intervention, and improved patient outcomes.
Abstract:The growing deployment of Large Language Models (LLMs) in real-world applications has raised concerns about their potential misuse in generating harmful or deceptive content. To address this issue, watermarking techniques have emerged as a promising solution by embedding identifiable binary messages into generated text for origin verification and misuse tracing. While recent efforts have explored multi-bit watermarking schemes capable of embedding rich information such as user identifiers, they typically suffer from the fundamental trade-off between text quality and decoding accuracy: to ensure reliable message decoding, they have to restrict the size of preferred token sets during encoding, yet such restrictions reduce the quality of the generated content. In this work, we propose MajorMark, a novel watermarking method that improves this trade-off through majority bit-aware encoding. MajorMark selects preferred token sets based on the majority bit of the message, enabling a larger and more flexible sampling of tokens. In contrast to prior methods that rely on token frequency analysis for decoding, MajorMark employs a clustering-based decoding strategy, which maintains high decoding accuracy even when the preferred token set is large, thus preserving both content quality and decoding accuracy. We further introduce MajorMark$^+$, which partitions the message into multiple blocks to independently encode and deterministically decode each block, thereby further enhancing the quality of watermarked text and improving decoding accuracy. Extensive experiments on state-of-the-art LLMs demonstrate that our methods significantly enhance both decoding accuracy and text generation quality, outperforming prior multi-bit watermarking baselines.
Abstract:Federated Learning has recently been utilized to collaboratively fine-tune foundation models across multiple clients. Notably, federated low-rank adaptation LoRA-based fine-tuning methods have recently gained attention, which allows clients to fine-tune FMs with a small portion of trainable parameters locally. However, most existing methods do not account for the heterogeneous resources of clients or lack an effective local training strategy to maximize global fine-tuning performance under limited resources. In this work, we propose Fed-HeLLo, a novel federated LoRA-based fine-tuning framework that enables clients to collaboratively fine-tune an FM with different local trainable LoRA layers. To ensure its effectiveness, we develop several heterogeneous LoRA allocation (HLA) strategies that adaptively allocate local trainable LoRA layers based on clients' resource capabilities and the layer importance. Specifically, based on the dynamic layer importance, we design a Fisher Information Matrix score-based HLA that leverages dynamic gradient norm information. To better stabilize the training process, we consider the intrinsic importance of LoRA layers and design a Geometrically-Defined HLA strategy. It shapes the collective distribution of trainable LoRA layers into specific geometric patterns, such as Triangle, Inverted Triangle, Bottleneck, and Uniform. Moreover, we extend GD-HLA into a randomized version, named Randomized Geometrically-Defined HLA, for enhanced model accuracy with randomness. By co-designing the proposed HLA strategies, we incorporate both the dynamic and intrinsic layer importance into the design of our HLA strategy. We evaluate our approach on five datasets under diverse federated LoRA fine-tuning settings, covering three levels of data distribution from IID to extreme Non-IID. Results show that Fed-HeLLo with HLA strategies is both effective and efficient.
Abstract:Theorem proving serves as a major testbed for evaluating complex reasoning abilities in large language models (LLMs). However, traditional automated theorem proving (ATP) approaches rely heavily on formal proof systems that poorly align with LLMs' strength derived from informal, natural language knowledge acquired during pre-training. In this work, we propose DeepTheorem, a comprehensive informal theorem-proving framework exploiting natural language to enhance LLM mathematical reasoning. DeepTheorem includes a large-scale benchmark dataset consisting of 121K high-quality IMO-level informal theorems and proofs spanning diverse mathematical domains, rigorously annotated for correctness, difficulty, and topic categories, accompanied by systematically constructed verifiable theorem variants. We devise a novel reinforcement learning strategy (RL-Zero) explicitly tailored to informal theorem proving, leveraging the verified theorem variants to incentivize robust mathematical inference. Additionally, we propose comprehensive outcome and process evaluation metrics examining proof correctness and the quality of reasoning steps. Extensive experimental analyses demonstrate DeepTheorem significantly improves LLM theorem-proving performance compared to existing datasets and supervised fine-tuning protocols, achieving state-of-the-art accuracy and reasoning quality. Our findings highlight DeepTheorem's potential to fundamentally advance automated informal theorem proving and mathematical exploration.