Knowledge Graph-Based Explainable and Generalized Zero-Shot Semantic Communications

Data-driven semantic communication is based on superficial statistical patterns, thereby lacking interpretability and generalization, especially for applications with the presence of unseen data. To address these challenges, we propose a novel knowledge graph-enhanced zero-shot semantic communication (KGZS-SC) network. Guided by the structured semantic information from a knowledge graph-based semantic knowledge base (KG-SKB), our scheme provides generalized semantic representations and enables reasoning for unseen cases. Specifically, the KG-SKB aligns the semantic features in a shared category semantics embedding space and enhances the generalization ability of the transmitter through aligned semantic features, thus reducing communication overhead by selectively transmitting compact visual semantics. At the receiver, zero-shot learning (ZSL) is leveraged to enable direct classification for unseen cases without the demand for retraining or additional computational overhead, thereby enhancing the adaptability and efficiency of the classification process in dynamic or resource-constrained environments. The simulation results conducted on the APY datasets show that the proposed KGZS-SC network exhibits robust generalization and significantly outperforms existing SC frameworks in classifying unseen categories across a range of SNR levels.

KERAP: A Knowledge-Enhanced Reasoning Approach for Accurate Zero-shot Diagnosis Prediction Using Multi-agent LLMs

Medical diagnosis prediction plays a critical role in disease detection and personalized healthcare. While machine learning (ML) models have been widely adopted for this task, their reliance on supervised training limits their ability to generalize to unseen cases, particularly given the high cost of acquiring large, labeled datasets. Large language models (LLMs) have shown promise in leveraging language abilities and biomedical knowledge for diagnosis prediction. However, they often suffer from hallucinations, lack structured medical reasoning, and produce useless outputs. To address these challenges, we propose KERAP, a knowledge graph (KG)-enhanced reasoning approach that improves LLM-based diagnosis prediction through a multi-agent architecture. Our framework consists of a linkage agent for attribute mapping, a retrieval agent for structured knowledge extraction, and a prediction agent that iteratively refines diagnosis predictions. Experimental results demonstrate that KERAP enhances diagnostic reliability efficiently, offering a scalable and interpretable solution for zero-shot medical diagnosis prediction.

F^2TTA: Free-Form Test-Time Adaptation on Cross-Domain Medical Image Classification via Image-Level Disentangled Prompt Tuning

Test-Time Adaptation (TTA) has emerged as a promising solution for adapting a source model to unseen medical sites using unlabeled test data, due to the high cost of data annotation. Existing TTA methods consider scenarios where data from one or multiple domains arrives in complete domain units. However, in clinical practice, data usually arrives in domain fragments of arbitrary lengths and in random arrival orders, due to resource constraints and patient variability. This paper investigates a practical Free-Form Test-Time Adaptation (F$^{2}$TTA) task, where a source model is adapted to such free-form domain fragments, with shifts occurring between fragments unpredictably. In this setting, these shifts could distort the adaptation process. To address this problem, we propose a novel Image-level Disentangled Prompt Tuning (I-DiPT) framework. I-DiPT employs an image-invariant prompt to explore domain-invariant representations for mitigating the unpredictable shifts, and an image-specific prompt to adapt the source model to each test image from the incoming fragments. The prompts may suffer from insufficient knowledge representation since only one image is available for training. To overcome this limitation, we first introduce Uncertainty-oriented Masking (UoM), which encourages the prompts to extract sufficient information from the incoming image via masked consistency learning driven by the uncertainty of the source model representations. Then, we further propose a Parallel Graph Distillation (PGD) method that reuses knowledge from historical image-specific and image-invariant prompts through parallel graph networks. Experiments on breast cancer and glaucoma classification demonstrate the superiority of our method over existing TTA approaches in F$^{2}$TTA. Code is available at https://github.com/mar-cry/F2TTA.

DIY-MKG: An LLM-Based Polyglot Language Learning System

Existing language learning tools, even those powered by Large Language Models (LLMs), often lack support for polyglot learners to build linguistic connections across vocabularies in multiple languages, provide limited customization for individual learning paces or needs, and suffer from detrimental cognitive offloading. To address these limitations, we design Do-It-Yourself Multilingual Knowledge Graph (DIY-MKG), an open-source system that supports polyglot language learning. DIY-MKG allows the user to build personalized vocabulary knowledge graphs, which are constructed by selective expansion with related words suggested by an LLM. The system further enhances learning through rich annotation capabilities and an adaptive review module that leverages LLMs for dynamic, personalized quiz generation. In addition, DIY-MKG allows users to flag incorrect quiz questions, simultaneously increasing user engagement and providing a feedback loop for prompt refinement. Our evaluation of LLM-based components in DIY-MKG shows that vocabulary expansion is reliable and fair across multiple languages, and that the generated quizzes are highly accurate, validating the robustness of DIY-MKG.

Scalable Feature Learning on Huge Knowledge Graphs for Downstream Machine Learning

Many machine learning tasks can benefit from external knowledge. Large knowledge graphs store such knowledge, and embedding methods can be used to distill it into ready-to-use vector representations for downstream applications. For this purpose, current models have however two limitations: they are primarily optimized for link prediction, via local contrastive learning, and they struggle to scale to the largest graphs due to GPU memory limits. To address these, we introduce SEPAL: a Scalable Embedding Propagation ALgorithm for large knowledge graphs designed to produce high-quality embeddings for downstream tasks at scale. The key idea of SEPAL is to enforce global embedding alignment by optimizing embeddings only on a small core of entities, and then propagating them to the rest of the graph via message passing. We evaluate SEPAL on 7 large-scale knowledge graphs and 46 downstream machine learning tasks. Our results show that SEPAL significantly outperforms previous methods on downstream tasks. In addition, SEPAL scales up its base embedding model, enabling fitting huge knowledge graphs on commodity hardware.

S2FGL: Spatial Spectral Federated Graph Learning

Federated Graph Learning (FGL) combines the privacy-preserving capabilities of federated learning (FL) with the strong graph modeling capability of Graph Neural Networks (GNNs). Current research addresses subgraph-FL only from the structural perspective, neglecting the propagation of graph signals on spatial and spectral domains of the structure. From a spatial perspective, subgraph-FL introduces edge disconnections between clients, leading to disruptions in label signals and a degradation in the class knowledge of the global GNN. From a spectral perspective, spectral heterogeneity causes inconsistencies in signal frequencies across subgraphs, which makes local GNNs overfit the local signal propagation schemes. As a result, spectral client drifts occur, undermining global generalizability. To tackle the challenges, we propose a global knowledge repository to mitigate label signal disruption and a frequency alignment to address spectral client drifts. The combination of spatial and spectral strategies forms our framework S2FGL. Extensive experiments on multiple datasets demonstrate the superiority of S2FGL. The code is available at https://github.com/Wonder7racer/S2FGL.git.

Active Inference AI Systems for Scientific Discovery

The rapid evolution of artificial intelligence has led to expectations of transformative scientific discovery, yet current systems remain fundamentally limited by their operational architectures, brittle reasoning mechanisms, and their separation from experimental reality. Building on earlier work, we contend that progress in AI-driven science now depends on closing three fundamental gaps -- the abstraction gap, the reasoning gap, and the reality gap -- rather than on model size/data/test time compute. Scientific reasoning demands internal representations that support simulation of actions and response, causal structures that distinguish correlation from mechanism, and continuous calibration. We define active inference AI systems for scientific discovery as those that (i) maintain long-lived research memories grounded in causal self-supervised foundation models, (ii) symbolic or neuro-symbolic planners equipped with Bayesian guardrails, (iii) grow persistent knowledge graphs where thinking generates novel conceptual nodes, reasoning establishes causal edges, and real-world interaction prunes false connections while strengthening verified pathways, and (iv) refine their internal representations through closed-loop interaction with both high-fidelity simulators and automated laboratories - an operational loop where mental simulation guides action and empirical surprise reshapes understanding. In essence, we outline an architecture where discovery arises from the interplay between internal models that enable counterfactual reasoning and external validation that grounds hypotheses in reality. It is also argued that the inherent ambiguity in feedback from simulations and experiments, and underlying uncertainties makes human judgment indispensable, not as a temporary scaffold but as a permanent architectural component.

Generating Reliable Adverse event Profiles for Health through Automated Integrated Data (GRAPH-AID): A Semi-Automated Ontology Building Approach

As data and knowledge expand rapidly, adopting systematic methodologies for ontology generation has become crucial. With the daily increases in data volumes and frequent content changes, the demand for databases to store and retrieve information for the creation of knowledge graphs has become increasingly urgent. The previously established Knowledge Acquisition and Representation Methodology (KNARM) outlines a systematic approach to address these challenges and create knowledge graphs. However, following this methodology highlights the existing challenge of seamlessly integrating Neo4j databases with the Web Ontology Language (OWL). Previous attempts to integrate data from Neo4j into an ontology have been discussed, but these approaches often require an understanding of description logics (DL) syntax, which may not be familiar to many users. Thus, a more accessible method is necessary to bridge this gap. This paper presents a user-friendly approach that utilizes Python and its rdflib library to support ontology development. We showcase our novel approach through a Neo4j database we created by integrating data from the Food and Drug Administration (FDA) Adverse Event Reporting System (FAERS) database. Using this dataset, we developed a Python script that automatically generates the required classes and their axioms, facilitating a smoother integration process. This approach offers a practical solution to the challenges of ontology generation in the context of rapidly growing adverse drug event datasets, supporting improved drug safety monitoring and public health decision-making.

KnowML: Improving Generalization of ML-NIDS with Attack Knowledge Graphs

Despite extensive research on Machine Learning-based Network Intrusion Detection Systems (ML-NIDS), their capability to detect diverse attack variants remains uncertain. Prior studies have largely relied on homogeneous datasets, which artificially inflate performance scores and offer a false sense of security. Designing systems that can effectively detect a wide range of attack variants remains a significant challenge. The progress of ML-NIDS continues to depend heavily on human expertise, which can embed subjective judgments of system designers into the model, potentially hindering its ability to generalize across diverse attack types. To address this gap, we propose KnowML, a framework for knowledge-guided machine learning that integrates attack knowledge into ML-NIDS. KnowML systematically explores the threat landscape by leveraging Large Language Models (LLMs) to perform automated analysis of attack implementations. It constructs a unified Knowledge Graph (KG) of attack strategies, on which it applies symbolic reasoning to generate KG-Augmented Input, embedding domain knowledge directly into the design process of ML-NIDS. We evaluate KnowML on 28 realistic attack variants, of which 10 are newly collected for this study. Our findings reveal that baseline ML-NIDS models fail to detect several variants entirely, achieving F1 scores as low as 0 %. In contrast, our knowledge-guided approach achieves up to 99 % F1 score while maintaining a False Positive Rate below 0.1 %.

Automatic Prompt Optimization for Knowledge Graph Construction: Insights from an Empirical Study

A KG represents a network of entities and illustrates relationships between them. KGs are used for various applications, including semantic search and discovery, reasoning, decision-making, natural language processing, machine learning, and recommendation systems. Triple (subject-relation-object) extraction from text is the fundamental building block of KG construction and has been widely studied, for example, in early benchmarks such as ACE 2002 to more recent ones, such as WebNLG 2020, REBEL and SynthIE. While the use of LLMs is explored for KG construction, handcrafting reasonable task-specific prompts for LLMs is a labour-intensive exercise and can be brittle due to subtle changes in the LLM models employed. Recent work in NLP tasks (e.g. autonomy generation) uses automatic prompt optimization/engineering to address this challenge by generating optimal or near-optimal task-specific prompts given input-output examples. This empirical study explores the application of automatic prompt optimization for the triple extraction task using experimental benchmarking. We evaluate different settings by changing (a) the prompting strategy, (b) the LLM being used for prompt optimization and task execution, (c) the number of canonical relations in the schema (schema complexity), (d) the length and diversity of input text, (e) the metric used to drive the prompt optimization, and (f) the dataset being used for training and testing. We evaluate three different automatic prompt optimizers, namely, DSPy, APE, and TextGrad and use two different triple extraction datasets, SynthIE and REBEL. Through rigorous empirical evaluation, our main contribution highlights that automatic prompt optimization techniques can generate reasonable prompts similar to humans for triple extraction. In turn, these optimized prompts achieve improved results, particularly with increasing schema complexity and text size.