Generalization from Low- to Moderate-Resolution Spectra with Neural Networks for Stellar Parameter Estimation: A Case Study with DESI

Cross-survey generalization is a critical challenge in stellar spectral analysis, particularly in cases such as transferring from low- to moderate-resolution surveys. We investigate this problem using pre-trained models, focusing on simple neural networks such as multilayer perceptrons (MLPs), with a case study transferring from LAMOST low-resolution spectra (LRS) to DESI medium-resolution spectra (MRS). Specifically, we pre-train MLPs on either LRS or their embeddings and fine-tune them for application to DESI stellar spectra. We compare MLPs trained directly on spectra with those trained on embeddings derived from transformer-based models (self-supervised foundation models pre-trained for multiple downstream tasks). We also evaluate different fine-tuning strategies, including residual-head adapters, LoRA, and full fine-tuning. We find that MLPs pre-trained on LAMOST LRS achieve strong performance, even without fine-tuning, and that modest fine-tuning with DESI spectra further improves the results. For iron abundance, embeddings from a transformer-based model yield advantages in the metal-rich ([Fe/H] > -1.0) regime, but underperform in the metal-poor regime compared to MLPs trained directly on LRS. We also show that the optimal fine-tuning strategy depends on the specific stellar parameter under consideration. These results highlight that simple pre-trained MLPs can provide competitive cross-survey generalization, while the role of spectral foundation models for cross-survey stellar parameter estimation requires further exploration.

Predicting New Concept-Object Associations in Astronomy by Mining the Literature

We construct a concept-object knowledge graph from the full astro-ph corpus through July 2025. Using an automated pipeline, we extract named astrophysical objects from OCR-processed papers, resolve them to SIMBAD identifiers, and link them to scientific concepts annotated in the source corpus. We then test whether historical graph structure can forecast new concept-object associations before they appear in print. Because the concepts are derived from clustering and therefore overlap semantically, we apply an inference-time concept-similarity smoothing step uniformly to all methods. Across four temporal cutoffs on a physically meaningful subset of concepts, an implicit-feedback matrix factorization model (alternating least squares, ALS) with smoothing outperforms the strongest neighborhood baseline (KNN using text-embedding concept similarity) by 16.8% on NDCG@100 (0.144 vs 0.123) and 19.8% on Recall@100 (0.175 vs 0.146), and exceeds the best recency heuristic by 96% and 88%, respectively. These results indicate that historical literature encodes predictive structure not captured by global heuristics or local neighborhood voting, suggesting a path toward tools that could help triage follow-up targets for scarce telescope time.

What Understanding Means in AI-Laden Astronomy

Artificial intelligence is rapidly transforming astronomical research, yet the scientific community has largely treated this transformation as an engineering challenge rather than an epistemological one. This perspective article argues that philosophy of science offers essential tools for navigating AI's integration into astronomy--conceptual clarity about what "understanding" means, critical examination of assumptions about data and discovery, and frameworks for evaluating AI's roles across different research contexts. Drawing on an interdisciplinary workshop convening astronomers, philosophers, and computer scientists, we identify several tensions. First, the narrative that AI will "derive fundamental physics" from data misconstrues contemporary astronomy as equation-derivation rather than the observation-driven enterprise it is. Second, scientific understanding involves more than prediction--it requires narrative construction, contextual judgment, and communicative achievement that current AI architectures struggle to provide. Third, because narrative and judgment matter, human peer review remains essential--yet AI-generated content flooding the literature threatens our capacity to identify genuine insight. Fourth, while AI excels at well-defined problem-solving, the ill-defined problem-finding that drives breakthroughs appears to require capacities beyond pattern recognition. Fifth, as AI accelerates what is feasible, pursuitworthiness criteria risk shifting toward what AI makes easy rather than what is genuinely important. We propose "pragmatic understanding" as a framework for integration--recognizing AI as a tool that extends human cognition while requiring new norms for validation and epistemic evaluation. Engaging with these questions now may help the community shape the transformation rather than merely react to it.

Why Machine Learning Models Systematically Underestimate Extreme Values II: How to Fix It with LatentNN

Attenuation bias -- the systematic underestimation of regression coefficients due to measurement errors in input variables -- affects astronomical data-driven models. For linear regression, this problem was solved by treating the true input values as latent variables to be estimated alongside model parameters. In this paper, we show that neural networks suffer from the same attenuation bias and that the latent variable solution generalizes directly to neural networks. We introduce LatentNN, a method that jointly optimizes network parameters and latent input values by maximizing the joint likelihood of observing both inputs and outputs. We demonstrate the correction on one-dimensional regression, multivariate inputs with correlated features, and stellar spectroscopy applications. LatentNN reduces attenuation bias across a range of signal-to-noise ratios where standard neural networks show large bias. This provides a framework for improved neural network inference in the low signal-to-noise regime characteristic of astronomical data. This bias correction is most effective when measurement errors are less than roughly half the intrinsic data range; in the regime of very low signal-to-noise and few informative features. Code is available at https://github.com/tingyuansen/LatentNN.

Large Language Models Achieve Gold Medal Performance at International Astronomy & Astrophysics Olympiad

While task-specific demonstrations show early success in applying large language models (LLMs) to automate some astronomical research tasks, they only provide incomplete views of all necessary capabilities in solving astronomy problems, calling for more thorough understanding of LLMs' strengths and limitations. So far, existing benchmarks and evaluations focus on simple question-answering that primarily tests astronomical knowledge and fails to evaluate the complex reasoning required for real-world research in the discipline. Here, we address this gap by systematically benchmarking five state-of-the-art LLMs on the International Olympiad on Astronomy and Astrophysics (IOAA) exams, which are designed to examine deep conceptual understanding, multi-step derivations, and multimodal analysis. With average scores of 85.6% and 84.2%, Gemini 2.5 Pro and GPT-5 (the two top-performing models) not only achieve gold medal level performance but also rank in the top two among ~200-300 participants in all four IOAA theory exams evaluated (2022-2025). In comparison, results on the data analysis exams show more divergence. GPT-5 still excels in the exams with an 88.5% average score, ranking top 10 among the participants in the four most recent IOAAs, while other models' performances drop to 48-76%. Furthermore, our in-depth error analysis underscores conceptual reasoning, geometric reasoning, and spatial visualization (52-79% accuracy) as consistent weaknesses among all LLMs. Hence, although LLMs approach peak human performance in theory exams, critical gaps must be addressed before they can serve as autonomous research agents in astronomy.

Effective Training Data Synthesis for Improving MLLM Chart Understanding

Being able to effectively read scientific plots, or chart understanding, is a central part toward building effective agents for science. However, existing multimodal large language models (MLLMs), especially open-source ones, are still falling behind with a typical success rate of 30%-50% on challenging benchmarks. Previous studies on fine-tuning MLLMs with synthetic charts are often restricted by their inadequate similarity to the real charts, which could compromise model training and performance on complex real-world charts. In this study, we show that modularizing chart generation and diversifying visual details improves chart understanding capabilities. In particular, we design a five-step data synthesis pipeline, where we separate data and function creation for single plot generation, condition the generation of later subplots on earlier ones for multi-subplot figures, visually diversify the generated figures, filter out low quality data, and finally generate the question-answer (QA) pairs with GPT-4o. This approach allows us to streamline the generation of fine-tuning datasets and introduce the effective chart dataset (ECD), which contains 10k+ chart images and 300k+ QA pairs, covering 25 topics and featuring 250+ chart type combinations with high visual complexity. We show that ECD consistently improves the performance of various MLLMs on a range of real-world and synthetic test sets. Code, data and models are available at: https://github.com/yuweiyang-anu/ECD.

SpecCLIP: Aligning and Translating Spectroscopic Measurements for Stars

In recent years, large language models (LLMs) have transformed natural language understanding through vast datasets and large-scale parameterization. Inspired by this success, we present SpecCLIP, a foundation model framework that extends LLM-inspired methodologies to stellar spectral analysis. Stellar spectra, akin to structured language, encode rich physical and chemical information about stars. By training foundation models on large-scale spectral datasets, our goal is to learn robust and informative embeddings that support diverse downstream applications. As a proof of concept, SpecCLIP involves pre-training on two spectral types--LAMOST low-resolution and Gaia XP--followed by contrastive alignment using the CLIP (Contrastive Language-Image Pre-training) framework, adapted to associate spectra from different instruments. This alignment is complemented by auxiliary decoders that preserve spectrum-specific information and enable translation (prediction) between spectral types, with the former achieved by maximizing mutual information between embeddings and input spectra. The result is a cross-spectrum framework enabling intrinsic calibration and flexible applications across instruments. We demonstrate that fine-tuning these models on moderate-sized labeled datasets improves adaptability to tasks such as stellar-parameter estimation and chemical-abundance determination. SpecCLIP also enhances the accuracy and precision of parameter estimates benchmarked against external survey data. Additionally, its similarity search and cross-spectrum prediction capabilities offer potential for anomaly detection. Our results suggest that contrastively trained foundation models enriched with spectrum-aware decoders can advance precision stellar spectroscopy.

Statistical Machine Learning for Astronomy -- A Textbook

This textbook provides a systematic treatment of statistical machine learning for astronomical research through the lens of Bayesian inference, developing a unified framework that reveals connections between modern data analysis techniques and traditional statistical methods. We show how these techniques emerge from familiar statistical foundations. The consistently Bayesian perspective prioritizes uncertainty quantification and statistical rigor essential for scientific inference in astronomy. The textbook progresses from probability theory and Bayesian inference through supervised learning including linear regression with measurement uncertainties, logistic regression, and classification. Unsupervised learning topics cover Principal Component Analysis and clustering methods. We then introduce computational techniques through sampling and Markov Chain Monte Carlo, followed by Gaussian Processes as probabilistic nonparametric methods and neural networks within the broader statistical context. Our theory-focused pedagogical approach derives each method from first principles with complete mathematical development, emphasizing statistical insight and complementing with astronomical applications. We prioritize understanding why algorithms work, when they are appropriate, and how they connect to broader statistical principles. The treatment builds toward modern techniques including neural networks through a solid foundation in classical methods and their theoretical underpinnings. This foundation enables thoughtful application of these methods to astronomical research, ensuring proper consideration of assumptions, limitations, and uncertainty propagation essential for advancing astronomical knowledge in the era of large astronomical surveys.

AstroMLab 4: Benchmark-Topping Performance in Astronomy Q&A with a 70B-Parameter Domain-Specialized Reasoning Model

General-purpose large language models, despite their broad capabilities, often struggle with specialized domain knowledge, a limitation particularly pronounced in more accessible, lower-parameter versions. This gap hinders their deployment as effective agents in demanding fields such as astronomy. Building on our prior work with AstroSage-8B, this study introduces AstroSage-70B, a significantly larger and more advanced domain-specialized natural-language AI assistant. It is designed for research and education across astronomy, astrophysics, space science, astroparticle physics, cosmology, and astronomical instrumentation. Developed from the Llama-3.1-70B foundation, AstroSage-70B underwent extensive continued pre-training on a vast corpus of astronomical literature, followed by supervised fine-tuning and model merging. Beyond its 70-billion parameter scale, this model incorporates refined datasets, judiciously chosen learning hyperparameters, and improved training procedures, achieving state-of-the-art performance on complex astronomical tasks. Notably, we integrated reasoning chains into the SFT dataset, enabling AstroSage-70B to either answer the user query immediately, or first emit a human-readable thought process. Evaluated on the AstroMLab-1 benchmark -- comprising 4,425 questions from literature withheld during training -- AstroSage-70B achieves state-of-the-art performance. It surpasses all other tested open-weight and proprietary models, including leading systems like o3, Gemini-2.5-Pro, Claude-3.7-Sonnet, Deepseek-R1, and Qwen-3-235B, even those with API costs two orders of magnitude higher. This work demonstrates that domain specialization, when applied to large-scale models, can enable them to outperform generalist counterparts in specialized knowledge areas like astronomy, thereby advancing the frontier of AI capabilities in the field.

Scaling Laws for Emulation of Stellar Spectra

Neural network-based emulators for the inference of stellar parameters and elemental abundances represent an increasingly popular methodology in modern spectroscopic surveys. However, these approaches are often constrained by their emulation precision and domain transfer capabilities. Greater generalizability has previously been achieved only with significantly larger model architectures, as demonstrated by Transformer-based models in natural language processing. This observation aligns with neural scaling laws, where model performance predictably improves with increased model size, computational resources allocated to model training, and training data volume. In this study, we demonstrate that these scaling laws also apply to Transformer-based spectral emulators in astronomy. Building upon our previous work with TransformerPayne and incorporating Maximum Update Parametrization techniques from natural language models, we provide training guidelines for scaling models to achieve optimal performance. Our results show that within the explored parameter space, clear scaling relationships emerge. These findings suggest that optimal computational resource allocation requires balanced scaling. Specifically, given a tenfold increase in training compute, achieving an optimal seven-fold reduction in mean squared error necessitates an approximately 2.5-fold increase in dataset size and a 3.8-fold increase in model size. This study establishes a foundation for developing spectral foundational models with enhanced domain transfer capabilities.