Exploring the Impact of the Output Format on the Evaluation of Large Language Models for Code Translation

Code translation between programming languages is a long-existing and critical task in software engineering, facilitating the modernization of legacy systems, ensuring cross-platform compatibility, and enhancing software performance. With the recent advances in large language models (LLMs) and their applications to code translation, there is an increasing need for comprehensive evaluation of these models. In this study, we empirically analyze the generated outputs of eleven popular instruct-tuned LLMs with parameters ranging from 1B up to 46.7B on 3,820 translation pairs across five languages, including C, C++, Go, Java, and Python. Our analysis found that between 26.4% and 73.7% of code translations produced by our evaluated LLMs necessitate post-processing, as these translations often include a mix of code, quotes, and text rather than being purely source code. Overlooking the output format of these models can inadvertently lead to underestimation of their actual performance. This is particularly evident when evaluating them with execution-based metrics such as Computational Accuracy (CA). Our results demonstrate that a strategic combination of prompt engineering and regular expression can effectively extract the source code from the model generation output. In particular, our method can help eleven selected models achieve an average Code Extraction Success Rate (CSR) of 92.73%. Our findings shed light on and motivate future research to conduct more reliable benchmarks of LLMs for code translation.

CarbonNet: How Computer Vision Plays a Role in Climate Change? Application: Learning Geomechanics from Subsurface Geometry of CCS to Mitigate Global Warming

We introduce a new approach using computer vision to predict the land surface displacement from subsurface geometry images for Carbon Capture and Sequestration (CCS). CCS has been proved to be a key component for a carbon neutral society. However, scientists see there are challenges along the way including the high computational cost due to the large model scale and limitations to generalize a pre-trained model with complex physics. We tackle those challenges by training models directly from the subsurface geometry images. The goal is to understand the respons of land surface displacement due to carbon injection and utilize our trained models to inform decision making in CCS projects. We implement multiple models (CNN, ResNet, and ResNetUNet) for static mechanics problem, which is a image prediction problem. Next, we use the LSTM and transformer for transient mechanics scenario, which is a video prediction problem. It shows ResNetUNet outperforms the others thanks to its architecture in static mechanics problem, and LSTM shows comparable performance to transformer in transient problem. This report proceeds by outlining our dataset in detail followed by model descriptions in method section. Result and discussion state the key learning, observations, and conclusion with future work rounds out the paper.

PE-MVCNet: Multi-view and Cross-modal Fusion Network for Pulmonary Embolism Prediction

The early detection of a pulmonary embolism (PE) is critical for enhancing patient survival rates. Both image-based and non-image-based features are of utmost importance in medical classification tasks. In a clinical setting, physicians tend to rely on the contextual information provided by Electronic Medical Records (EMR) to interpret medical imaging. However, very few models effectively integrate clinical information with imaging data. To address this shortcoming, we suggest a multimodal fusion methodology, termed PE-MVCNet, which capitalizes on Computed Tomography Pulmonary Angiography imaging and EMR data. This method comprises the Image-only module with an integrated multi-view block, the EMR-only module, and the Cross-modal Attention Fusion (CMAF) module. These modules cooperate to extract comprehensive features that subsequently generate predictions for PE. We conducted experiments using the publicly accessible Stanford University Medical Center dataset, achieving an AUROC of 94.1%, an accuracy rate of 90.2%, and an F1 score of 90.6%. Our proposed model outperforms existing methodologies, corroborating that our multimodal fusion model excels compared to models that use a single data modality. Our source code is available at https://github.com/LeavingStarW/PE-MVCNET.

Sym-Q: Adaptive Symbolic Regression via Sequential Decision-Making

Symbolic regression holds great potential for uncovering underlying mathematical and physical relationships from empirical data. While existing transformer-based models have recently achieved significant success in this domain, they face challenges in terms of generalizability and adaptability. Typically, in cases where the output expressions do not adequately fit experimental data, the models lack efficient mechanisms to adapt or modify the expression. This inflexibility hinders their application in real-world scenarios, particularly in discovering unknown physical or biological relationships. Inspired by how human experts refine and adapt expressions, we introduce Symbolic Q-network (Sym-Q), a novel reinforcement learning-based model that redefines symbolic regression as a sequential decision-making task. Sym-Q leverages supervised demonstrations and refines expressions based on reward signals indicating the quality of fitting precision. Its distinctive ability to manage the complexity of expression trees and perform precise step-wise updates significantly enhances flexibility and efficiency. Our results demonstrate that Sym-Q excels not only in recovering underlying mathematical structures but also uniquely learns to efficiently refine the output expression based on reward signals, thereby discovering underlying expressions. Sym-Q paves the way for more intuitive and impactful discoveries in physical science, marking a substantial advancement in the field of symbolic regression.

PeaTMOSS: A Dataset and Initial Analysis of Pre-Trained Models in Open-Source Software

The development and training of deep learning models have become increasingly costly and complex. Consequently, software engineers are adopting pre-trained models (PTMs) for their downstream applications. The dynamics of the PTM supply chain remain largely unexplored, signaling a clear need for structured datasets that document not only the metadata but also the subsequent applications of these models. Without such data, the MSR community cannot comprehensively understand the impact of PTM adoption and reuse. This paper presents the PeaTMOSS dataset, which comprises metadata for 281,638 PTMs and detailed snapshots for all PTMs with over 50 monthly downloads (14,296 PTMs), along with 28,575 open-source software repositories from GitHub that utilize these models. Additionally, the dataset includes 44,337 mappings from 15,129 downstream GitHub repositories to the 2,530 PTMs they use. To enhance the dataset's comprehensiveness, we developed prompts for a large language model to automatically extract model metadata, including the model's training datasets, parameters, and evaluation metrics. Our analysis of this dataset provides the first summary statistics for the PTM supply chain, showing the trend of PTM development and common shortcomings of PTM package documentation. Our example application reveals inconsistencies in software licenses across PTMs and their dependent projects. PeaTMOSS lays the foundation for future research, offering rich opportunities to investigate the PTM supply chain. We outline mining opportunities on PTMs, their downstream usage, and cross-cutting questions.

ZS4C: Zero-Shot Synthesis of Compilable Code for Incomplete Code Snippets using ChatGPT

Technical question and answering (Q&A) sites such as Stack Overflow have become an important source for software developers to seek knowledge. However, code snippets on Q&A sites are usually uncompilable and semantically incomplete for compilation due to unresolved types and missing dependent libraries, which raises the obstacle for users to reuse or analyze Q&A code snippets. Prior approaches either are not designed for synthesizing compilable code or suffer from a low compilation success rate. To address this problem, we propose ZS4C, a lightweight approach to perform zero-shot synthesis of compilable code from incomplete code snippets using Large Language Model (LLM). ZS4C operates in two stages. In the first stage, ZS4C utilizes an LLM, i.e., ChatGPT, to identify missing import statements for a given code snippet, leveraging our designed task-specific prompt template. In the second stage, ZS4C fixes compilation errors caused by incorrect import statements and syntax errors through collaborative work between ChatGPT and a compiler. We thoroughly evaluated ZS4C on a widely used benchmark called StatType-SO against the SOTA approach SnR. Compared with SnR, ZS4C improves the compilation rate from 63% to 87.6%, with a 39.3% improvement. On average, ZS4C can infer more accurate import statements than SnR, with an improvement of 6.6% in the F1.

A First Look at Information Highlighting in Stack Overflow Answers

Context: Navigating the knowledge of Stack Overflow (SO) remains challenging. To make the posts vivid to users, SO allows users to write and edit posts with Markdown or HTML so that users can leverage various formatting styles (e.g., bold, italic, and code) to highlight the important information. Nonetheless, there have been limited studies on the highlighted information. Objective: We carried out the first large-scale exploratory study on the information highlighted in SO answers in our recent study. To extend our previous study, we develop approaches to automatically recommend highlighted content with formatting styles using neural network architectures initially designed for the Named Entity Recognition task. Method: In this paper, we studied 31,169,429 answers of Stack Overflow. For training recommendation models, we choose CNN and BERT models for each type of formatting (i.e., Bold, Italic, Code, and Heading) using the information highlighting dataset we collected from SO answers. Results: Our models based on CNN architecture achieve precision ranging from 0.71 to 0.82. The trained model for automatic code content highlighting achieves a recall of 0.73 and an F1 score of 0.71, outperforming the trained models for other formatting styles. The BERT models have even lower recalls and F1 scores than the CNN models. Our analysis of failure cases indicates that the majority of the failure cases are missing identification (i.e., the model misses the content that is supposed to be highlighted) due to the models tend to learn the frequently highlighted words while struggling to learn less frequent words. Conclusion: Our findings suggest that it is possible to develop recommendation models for highlighting information for answers with different formatting styles on Stack Overflow.

Gemini: A Family of Highly Capable Multimodal Models

This report introduces a new family of multimodal models, Gemini, that exhibit remarkable capabilities across image, audio, video, and text understanding. The Gemini family consists of Ultra, Pro, and Nano sizes, suitable for applications ranging from complex reasoning tasks to on-device memory-constrained use-cases. Evaluation on a broad range of benchmarks shows that our most-capable Gemini Ultra model advances the state of the art in 30 of 32 of these benchmarks - notably being the first model to achieve human-expert performance on the well-studied exam benchmark MMLU, and improving the state of the art in every one of the 20 multimodal benchmarks we examined. We believe that the new capabilities of Gemini models in cross-modal reasoning and language understanding will enable a wide variety of use cases and we discuss our approach toward deploying them responsibly to users.

Where have you been? A Study of Privacy Risk for Point-of-Interest Recommendation

As location-based services (LBS) have grown in popularity, the collection of human mobility data has become increasingly extensive to build machine learning (ML) models offering enhanced convenience to LBS users. However, the convenience comes with the risk of privacy leakage since this type of data might contain sensitive information related to user identities, such as home/work locations. Prior work focuses on protecting mobility data privacy during transmission or prior to release, lacking the privacy risk evaluation of mobility data-based ML models. To better understand and quantify the privacy leakage in mobility data-based ML models, we design a privacy attack suite containing data extraction and membership inference attacks tailored for point-of-interest (POI) recommendation models, one of the most widely used mobility data-based ML models. These attacks in our attack suite assume different adversary knowledge and aim to extract different types of sensitive information from mobility data, providing a holistic privacy risk assessment for POI recommendation models. Our experimental evaluation using two real-world mobility datasets demonstrates that current POI recommendation models are vulnerable to our attacks. We also present unique findings to understand what types of mobility data are more susceptible to privacy attacks. Finally, we evaluate defenses against these attacks and highlight future directions and challenges.

SoK: Pitfalls in Evaluating Black-Box Attacks

Numerous works study black-box attacks on image classifiers. However, these works make different assumptions on the adversary's knowledge and current literature lacks a cohesive organization centered around the threat model. To systematize knowledge in this area, we propose a taxonomy over the threat space spanning the axes of feedback granularity, the access of interactive queries, and the quality and quantity of the auxiliary data available to the attacker. Our new taxonomy provides three key insights. 1) Despite extensive literature, numerous under-explored threat spaces exist, which cannot be trivially solved by adapting techniques from well-explored settings. We demonstrate this by establishing a new state-of-the-art in the less-studied setting of access to top-k confidence scores by adapting techniques from well-explored settings of accessing the complete confidence vector, but show how it still falls short of the more restrictive setting that only obtains the prediction label, highlighting the need for more research. 2) Identification the threat model of different attacks uncovers stronger baselines that challenge prior state-of-the-art claims. We demonstrate this by enhancing an initially weaker baseline (under interactive query access) via surrogate models, effectively overturning claims in the respective paper. 3) Our taxonomy reveals interactions between attacker knowledge that connect well to related areas, such as model inversion and extraction attacks. We discuss how advances in other areas can enable potentially stronger black-box attacks. Finally, we emphasize the need for a more realistic assessment of attack success by factoring in local attack runtime. This approach reveals the potential for certain attacks to achieve notably higher success rates and the need to evaluate attacks in diverse and harder settings, highlighting the need for better selection criteria.