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Toufiq Parag

Janelia Farm Research Campus- HHMI

Multilayer Dense Connections for Hierarchical Concept Classification


Mar 19, 2020
Toufiq Parag, Hongcheng Wang


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VideoSSL: Semi-Supervised Learning for Video Classification


Feb 29, 2020
Longlong Jing, Toufiq Parag, Zhe Wu, Yingli Tian, Hongcheng Wang


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Detecting Synapse Location and Connectivity by Signed Proximity Estimation and Pruning with Deep Nets


Oct 25, 2018
Toufiq Parag, Daniel Berger, Lee Kamentsky, Benedikt Staffler, Donglai Wei, Moritz Helmstaedter, Jeff W. Lichtman, Hanspeter Pfister


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Parallel Separable 3D Convolution for Video and Volumetric Data Understanding


Sep 11, 2018
Felix Gonda, Donglai Wei, Toufiq Parag, Hanspeter Pfister


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Anisotropic EM Segmentation by 3D Affinity Learning and Agglomeration


Aug 03, 2018
Toufiq Parag, Fabian Tschopp, William Grisaitis, Srinivas C Turaga, Xuewen Zhang, Brian Matejek, Lee Kamentsky, Jeff W. Lichtman, Hanspeter Pfister


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Morphological Error Detection in 3D Segmentations


May 30, 2017
David Rolnick, Yaron Meirovitch, Toufiq Parag, Hanspeter Pfister, Viren Jain, Jeff W. Lichtman, Edward S. Boyden, Nir Shavit

* 13 pages, 6 figures 

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Icon: An Interactive Approach to Train Deep Neural Networks for Segmentation of Neuronal Structures


Oct 27, 2016
Felix Gonda, Verena Kaynig, Ray Thouis, Daniel Haehn, Jeff Lichtman, Toufiq Parag, Hanspeter Pfister


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What Properties are Desirable from an Electron Microscopy Segmentation Algorithm


Sep 28, 2015
Toufiq Parag

* Extended version of the ICCV 2015 paper: Efficient Classifier Training to Minimize False Merges in Electron Microscopy Segmentation 

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A Context-aware Delayed Agglomeration Framework for Electron Microscopy Segmentation


Mar 23, 2015
Toufiq Parag, Anirban Chakraborty, Stephen Plaza, Lou Scheffer

* PLoS ONE 10(5): e0125825, 2015 

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Annotating Synapses in Large EM Datasets


Dec 04, 2014
Stephen M. Plaza, Toufiq Parag, Gary B. Huang, Donald J. Olbris, Mathew A. Saunders, Patricia K. Rivlin


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Enforcing Label and Intensity Consistency for IR Target Detection


Sep 09, 2014
Toufiq Parag

* First appeared in OTCBVS 2011 \cite{parag11otcbvs}. This manuscript presents updated results and an extension 

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Small Sample Learning of Superpixel Classifiers for EM Segmentation- Extended Version


Jun 13, 2014
Toufiq Parag, Stephen Plaza, Louis Scheffer

* Accepted for MICCAI 2014 

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Machine learning of hierarchical clustering to segment 2D and 3D images


Jul 23, 2013
Juan Nunez-Iglesias, Ryan Kennedy, Toufiq Parag, Jianbo Shi, Dmitri B. Chklovskii

* PLoS ONE, 2013, 8(8): e71715 
* 15 pages, 8 figures 

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Submodularity of a Set Label Disagreement Function


Jul 02, 2013
Toufiq Parag


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Learning Hypergraph Labeling for Feature Matching


Jul 13, 2011
Toufiq Parag, Vladimir Pavlovic, Ahmed Elgammal


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