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Toufiq Parag

Janelia Farm Research Campus- HHMI

Multilayer Dense Connections for Hierarchical Concept Classification

Mar 19, 2020
Toufiq Parag, Hongcheng Wang


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VideoSSL: Semi-Supervised Learning for Video Classification

Feb 29, 2020
Longlong Jing, Toufiq Parag, Zhe Wu, Yingli Tian, Hongcheng Wang


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Detecting Synapse Location and Connectivity by Signed Proximity Estimation and Pruning with Deep Nets

Oct 25, 2018
Toufiq Parag, Daniel Berger, Lee Kamentsky, Benedikt Staffler, Donglai Wei, Moritz Helmstaedter, Jeff W. Lichtman, Hanspeter Pfister


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Parallel Separable 3D Convolution for Video and Volumetric Data Understanding

Sep 11, 2018
Felix Gonda, Donglai Wei, Toufiq Parag, Hanspeter Pfister


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Anisotropic EM Segmentation by 3D Affinity Learning and Agglomeration

Aug 03, 2018
Toufiq Parag, Fabian Tschopp, William Grisaitis, Srinivas C Turaga, Xuewen Zhang, Brian Matejek, Lee Kamentsky, Jeff W. Lichtman, Hanspeter Pfister


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Morphological Error Detection in 3D Segmentations

May 30, 2017
David Rolnick, Yaron Meirovitch, Toufiq Parag, Hanspeter Pfister, Viren Jain, Jeff W. Lichtman, Edward S. Boyden, Nir Shavit

* 13 pages, 6 figures 

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Icon: An Interactive Approach to Train Deep Neural Networks for Segmentation of Neuronal Structures

Oct 27, 2016
Felix Gonda, Verena Kaynig, Ray Thouis, Daniel Haehn, Jeff Lichtman, Toufiq Parag, Hanspeter Pfister


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What Properties are Desirable from an Electron Microscopy Segmentation Algorithm

Sep 28, 2015
Toufiq Parag

* Extended version of the ICCV 2015 paper: Efficient Classifier Training to Minimize False Merges in Electron Microscopy Segmentation 

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A Context-aware Delayed Agglomeration Framework for Electron Microscopy Segmentation

Mar 23, 2015
Toufiq Parag, Anirban Chakraborty, Stephen Plaza, Lou Scheffer

* PLoS ONE 10(5): e0125825, 2015 

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Annotating Synapses in Large EM Datasets

Dec 04, 2014
Stephen M. Plaza, Toufiq Parag, Gary B. Huang, Donald J. Olbris, Mathew A. Saunders, Patricia K. Rivlin


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Enforcing Label and Intensity Consistency for IR Target Detection

Sep 09, 2014
Toufiq Parag

* First appeared in OTCBVS 2011 \cite{parag11otcbvs}. This manuscript presents updated results and an extension 

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Small Sample Learning of Superpixel Classifiers for EM Segmentation- Extended Version

Jun 13, 2014
Toufiq Parag, Stephen Plaza, Louis Scheffer

* Accepted for MICCAI 2014 

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Machine learning of hierarchical clustering to segment 2D and 3D images

Jul 23, 2013
Juan Nunez-Iglesias, Ryan Kennedy, Toufiq Parag, Jianbo Shi, Dmitri B. Chklovskii

* PLoS ONE, 2013, 8(8): e71715 
* 15 pages, 8 figures 

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Submodularity of a Set Label Disagreement Function

Jul 02, 2013
Toufiq Parag


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Learning Hypergraph Labeling for Feature Matching

Jul 13, 2011
Toufiq Parag, Vladimir Pavlovic, Ahmed Elgammal


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