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Stereo Correspondence and Reconstruction of Endoscopic Data Challenge

Jan 06, 2021
Max Allan, Jonathan Mcleod, Cong Cong Wang, Jean Claude Rosenthal, Ke Xue Fu, Trevor Zeffiro, Wenyao Xia, Zhu Zhanshi, Huoling Luo, Fucang Jia, Xiran Zhang, Xiaohong Li, Lalith Sharan, Tom Kurmann, Sebastian Schmid, Dimitris Psychogyios, Mahdi Azizian, Danail Stoyanov, Lena Maier-Hein, Stefanie Speidel


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SERV-CT: A disparity dataset from CT for validation of endoscopic 3D reconstruction

Dec 22, 2020
P. J. "Eddie'' Edwards, Dimitris Psychogyios, Stefanie Speidel, Lena Maier-Hein, Danail Stoyanov

* Submitted to Medical Image Analysis. 14 Figures, 17 pages 

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Surgical Data Science -- from Concepts to Clinical Translation

Oct 30, 2020
Lena Maier-Hein, Matthias Eisenmann, Duygu Sarikaya, Keno MĂ€rz, Toby Collins, Anand Malpani, Johannes Fallert, Hubertus Feussner, Stamatia Giannarou, Pietro Mascagni, Hirenkumar Nakawala, Adrian Park, Carla Pugh, Danail Stoyanov, Swaroop S. Vedula, Beat Peter MĂŒller, Kevin Cleary, Gabor Fichtinger, Germain Forestier, Bernard Gibaud, Teodor Grantcharov, Makoto Hashizume, Hannes Kenngott, Ron Kikinis, Lars MĂŒndermann, Nassir Navab, Sinan Onogur, Raphael Sznitman, Russell Taylor, Minu Dietlinde Tizabi, Martin Wagner, Gregory D. Hager, Thomas Neumuth, Nicolas Padoy, Pierre Jannin, Stefanie Speidel


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Detecting small polyps using a Dynamic SSD-GAN

Oct 29, 2020
Daniel C. Ohrenstein, Patrick Brandao, Daniel Toth, Laurence Lovat, Danail Stoyanov, Peter Mountney

* Machine Learning for Health (ML4H) at NeurIPS 2020 - Extended Abstract 

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A translational pathway of deep learning methods in GastroIntestinal Endoscopy

Oct 12, 2020
Sharib Ali, Mariia Dmitrieva, Noha Ghatwary, Sophia Bano, Gorkem Polat, Alptekin Temizel, Adrian Krenzer, Amar Hekalo, Yun Bo Guo, Bogdan Matuszewski, Mourad Gridach, Irina Voiculescu, Vishnusai Yoganand, Arnav Chavan, Aryan Raj, Nhan T. Nguyen, Dat Q. Tran, Le Duy Huynh, Nicolas Boutry, Shahadate Rezvy, Haijian Chen, Yoon Ho Choi, Anand Subramanian, Velmurugan Balasubramanian, Xiaohong W. Gao, Hongyu Hu, Yusheng Liao, Danail Stoyanov, Christian Daul, Stefano Realdon, Renato Cannizzaro, Dominique Lamarque, Terry Tran-Nguyen, Adam Bailey, Barbara Braden, James East, Jens Rittscher

* 30 pages 

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Surgical Video Motion Magnification with Suppression of Instrument Artefacts

Sep 16, 2020
Mirek Janatka, Hani J. Marcus, Neil L. Dorward, Danail Stoyanov

* Early accept to the Internation Conference on Medical Imaging Computing and Computer Assisted Intervention (MICCAI) 2020 Presentation available here: https://www.youtube.com/watch?v=kKI_Ygny76Q Supplementary video available here: https://www.youtube.com/watch?v=8DUkcHI149Y 

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Intraoperative Liver Surface Completion with Graph Convolutional VAE

Sep 08, 2020
Simone Foti, Bongjin Koo, Thomas Dowrick, Joao Ramalhinho, Moustafa Allam, Brian Davidson, Danail Stoyanov, Matthew J. Clarkson


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Real-Time Segmentation of Non-Rigid Surgical Tools based on Deep Learning and Tracking

Sep 07, 2020
Luis C. GarcĂ­a-Peraza-Herrera, Wenqi Li, Caspar Gruijthuijsen, Alain Devreker, George Attilakos, Jan Deprest, Emmanuel Vander Poorten, Danail Stoyanov, Tom Vercauteren, SĂ©bastien Ourselin

* Accepted in CARE Workshop, held in conjunction with MICCAI 2016 

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Predicting Visual Overlap of Images Through Interpretable Non-Metric Box Embeddings

Aug 13, 2020
Anita Rau, Guillermo Garcia-Hernando, Danail Stoyanov, Gabriel J. Brostow, Daniyar Turmukhambetov

* ECCV 2020 

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Synthetic and Real Inputs for Tool Segmentation in Robotic Surgery

Jul 26, 2020
Emanuele Colleoni, Philip Edwards, Danail Stoyanov


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Synthetic and Real Inputs for ToolSegmentation in Robotic Surgery

Jul 17, 2020
Emanuele Colleoni, Philip Edwards, Danail Stoyanov


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Deep Placental Vessel Segmentation for Fetoscopic Mosaicking

Jul 08, 2020
Sophia Bano, Francisco Vasconcelos, Luke M. Shepherd, Emmanuel Vander Poorten, Tom Vercauteren, Sebastien Ourselin, Anna L. David, Jan Deprest, Danail Stoyanov

* Accepted at MICCAI 2020 

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The challenges of deploying artificial intelligence models in a rapidly evolving pandemic

May 19, 2020
Yipeng Hu, Joseph Jacob, Geoffrey JM Parker, David J Hawkes, John R Hurst, Danail Stoyanov

* Accepted in Nature Machine Intelligence 

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Multi-Task Recurrent Neural Network for Surgical Gesture Recognition and Progress Prediction

Mar 10, 2020
Beatrice van Amsterdam, Matthew J. Clarkson, Danail Stoyanov

* Accepted to ICRA 2020 

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2018 Robotic Scene Segmentation Challenge

Feb 03, 2020
Max Allan, Satoshi Kondo, Sebastian Bodenstedt, Stefan Leger, Rahim Kadkhodamohammadi, Imanol Luengo, Felix Fuentes, Evangello Flouty, Ahmed Mohammed, Marius Pedersen, Avinash Kori, Varghese Alex, Ganapathy Krishnamurthi, David Rauber, Robert Mendel, Christoph Palm, Sophia Bano, Guinther Saibro, Chi-Sheng Shih, Hsun-An Chiang, Juntang Zhuang, Junlin Yang, Vladimir Iglovikov, Anton Dobrenkii, Madhu Reddiboina, Anubhav Reddy, Xingtong Liu, Cong Gao, Mathias Unberath, Myeonghyeon Kim, Chanho Kim, Chaewon Kim, Hyejin Kim, Gyeongmin Lee, Ihsan Ullah, Miguel Luna, Sang Hyun Park, Mahdi Azizian, Danail Stoyanov, Lena Maier-Hein, Stefanie Speidel


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More unlabelled data or label more data? A study on semi-supervised laparoscopic image segmentation

Aug 20, 2019
Yunguan Fu, Maria R. Robu, Bongjin Koo, Crispin Schneider, Stijn van Laarhoven, Danail Stoyanov, Brian Davidson, Matthew J. Clarkson, Yipeng Hu

* Accepted to MICCAI MIL3ID 2019 

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Weakly Supervised Recognition of Surgical Gestures

Jul 25, 2019
Beatrice van Amsterdam, Hirenkumar Nakawala, Elena De Momi, Danail Stoyanov

* 2019 IEEE International Conference on Robotics and Automation (ICRA) 

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Whole-Sample Mapping of Cancerous and Benign Tissue Properties

Jul 23, 2019
Lydia Neary-Zajiczek, Clara Essmann, Neil Clancy, Aiman Haider, Elena Miranda, Michael Shaw, Amir Gander, Brian Davidson, Delmiro Fernandez-Reyes, Vijay Pawar, Danail Stoyanov

* Accepted at MICCAI2019 

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CaDIS: Cataract Dataset for Image Segmentation

Jul 19, 2019
Evangello Flouty, Abdolrahim Kadkhodamohammadi, Imanol Luengo, Felix Fuentes-Hurtado, Hinde Taleb, Santiago Barbarisi, Gwenole Quellec, Danail Stoyanov


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Deep Sequential Mosaicking of Fetoscopic Videos

Jul 15, 2019
Sophia Bano, Francisco Vasconcelos, Marcel Tella Amo, George Dwyer, Caspar Gruijthuijsen, Jan Deprest, Sebastien Ourselin, Emmanuel Vander Poorten, Tom Vercauteren, Danail Stoyanov

* Accepted at MICCAI 2019 

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2017 Robotic Instrument Segmentation Challenge

Feb 21, 2019
Max Allan, Alex Shvets, Thomas Kurmann, Zichen Zhang, Rahul Duggal, Yun-Hsuan Su, Nicola Rieke, Iro Laina, Niveditha Kalavakonda, Sebastian Bodenstedt, Luis Herrera, Wenqi Li, Vladimir Iglovikov, Huoling Luo, Jian Yang, Danail Stoyanov, Lena Maier-Hein, Stefanie Speidel, Mahdi Azizian


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Nonrigid reconstruction of 3D breast surfaces with a low-cost RGBD camera for surgical planning and aesthetic evaluation

Jan 16, 2019
Rene Lacher, Francisco Vasconcelos, Norman Williams, Gerrit Rindermann, John Hipwell, David Hawkes, Danail Stoyanov

* Medical Image Analysis, Volume 53, April 2019, pp. 11-25 

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SurReal: enhancing Surgical simulation Realism using style transfer

Nov 07, 2018
Imanol Luengo, Evangello Flouty, Petros Giataganas, Piyamate Wisanuvej, Jean Nehme, Danail Stoyanov

* BMVC 2018 

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FaceOff: Anonymizing Videos in the Operating Rooms

Aug 06, 2018
Evangello Flouty, Odysseas Zisimopoulos, Danail Stoyanov

* MICCAI 2018: OR 2.0 Context-Aware Operating Theaters 

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Affordable Mobile-based Simulator for Robotic Surgery

Jul 20, 2018
Piyamate Wisanuvej, Petros Giataganas, Paul Riordan, Jean Nehme, Danail Stoyanov

* Hamlyn Symposium on Medical Robotics 2018 

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DeepPhase: Surgical Phase Recognition in CATARACTS Videos

Jul 17, 2018
Odysseas Zisimopoulos, Evangello Flouty, Imanol Luengo, Petros Giataganas, Jean Nehme, Andre Chow, Danail Stoyanov

* 8 pages, 3 figures, 1 table, MICCAI 2018 

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Automated Performance Assessment in Transoesophageal Echocardiography with Convolutional Neural Networks

Jun 13, 2018
Evangelos B. Mazomenos, Kamakshi Bansal, Bruce Martin, Andrew Smith, Susan Wright, Danail Stoyanov

* to be presented in MICCAI 2018, Granada, Spain, 16-20 Sep 2018 

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