DLRover: An Elastic Deep Training Extension with Auto Job Resource Recommendation

The cloud is still a popular platform for distributed deep learning (DL) training jobs since resource sharing in the cloud can improve resource utilization and reduce overall costs. However, such sharing also brings multiple challenges for DL training jobs, e.g., high-priority jobs could impact, even interrupt, low-priority jobs. Meanwhile, most existing distributed DL training systems require users to configure the resources (i.e., the number of nodes and resources like CPU and memory allocated to each node) of jobs manually before job submission and can not adjust the job's resources during the runtime. The resource configuration of a job deeply affect this job's performance (e.g., training throughput, resource utilization, and completion rate). However, this usually leads to poor performance of jobs since users fail to provide optimal resource configuration in most cases. \system~is a distributed DL framework can auto-configure a DL job's initial resources and dynamically tune the job's resources to win the better performance. With elastic capability, \system~can effectively adjusts the resources of a job when there are performance issues detected or a job fails because of faults or eviction. Evaluations results show \system~can outperform manual well-tuned resource configurations. Furthermore, in the production Kubernetes cluster of \company, \system~reduces the medium of job completion time by 31\%, and improves the job completion rate by 6\%, CPU utilization by 15\%, and memory utilization by 20\% compared with manual configuration.

ZScribbleSeg: Zen and the Art of Scribble Supervised Medical Image Segmentation

Curating a large scale fully-annotated dataset can be both labour-intensive and expertise-demanding, especially for medical images. To alleviate this problem, we propose to utilize solely scribble annotations for weakly supervised segmentation. Existing solutions mainly leverage selective losses computed solely on annotated areas and generate pseudo gold standard segmentation by propagating labels to adjacent areas. However, these methods could suffer from the inaccurate and sometimes unrealistic pseudo segmentation due to the insufficient supervision and incomplete shape features. Different from previous efforts, we first investigate the principle of ''good scribble annotations'', which leads to efficient scribble forms via supervision maximization and randomness simulation. Furthermore, we introduce regularization terms to encode the spatial relationship and shape prior, where a new formulation is developed to estimate the mixture ratios of label classes. These ratios are critical in identifying the unlabeled pixels for each class and correcting erroneous predictions, thus the accurate estimation lays the foundation for the incorporation of spatial prior. Finally, we integrate the efficient scribble supervision with the prior into a unified framework, denoted as ZScribbleSeg, and apply the method to multiple scenarios. Leveraging only scribble annotations, ZScribbleSeg set new state-of-the-arts on four segmentation tasks using ACDC, MSCMRseg, MyoPS and PPSS datasets.

CameraPose: Weakly-Supervised Monocular 3D Human Pose Estimation by Leveraging In-the-wild 2D Annotations

To improve the generalization of 3D human pose estimators, many existing deep learning based models focus on adding different augmentations to training poses. However, data augmentation techniques are limited to the "seen" pose combinations and hard to infer poses with rare "unseen" joint positions. To address this problem, we present CameraPose, a weakly-supervised framework for 3D human pose estimation from a single image, which can not only be applied on 2D-3D pose pairs but also on 2D alone annotations. By adding a camera parameter branch, any in-the-wild 2D annotations can be fed into our pipeline to boost the training diversity and the 3D poses can be implicitly learned by reprojecting back to 2D. Moreover, CameraPose introduces a refinement network module with confidence-guided loss to further improve the quality of noisy 2D keypoints extracted by 2D pose estimators. Experimental results demonstrate that the CameraPose brings in clear improvements on cross-scenario datasets. Notably, it outperforms the baseline method by 3mm on the most challenging dataset 3DPW. In addition, by combining our proposed refinement network module with existing 3D pose estimators, their performance can be improved in cross-scenario evaluation.

BUMP: A Benchmark of Unfaithful Minimal Pairs for Meta-Evaluation of Faithfulness Metrics

The proliferation of automatic faithfulness metrics for summarization has produced a need for benchmarks to evaluate them. While existing benchmarks measure the correlation with human judgements of faithfulness on model-generated summaries, they are insufficient for diagnosing whether metrics are: 1) consistent, i.e., decrease as errors are introduced into a summary, 2) effective on human-written texts, and 3) sensitive to different error types (as summaries can contain multiple errors). To address these needs, we present a benchmark of unfaithful minimal pairs (BUMP), a dataset of 889 human-written, minimally different summary pairs, where a single error (from an ontology of 7 types) is introduced to a summary from the CNN/DailyMail dataset to produce an unfaithful summary. We find BUMP complements existing benchmarks in a number of ways: 1) the summaries in BUMP are harder to discriminate and less probable under SOTA summarization models, 2) BUMP enables measuring the consistency of metrics, and reveals that the most discriminative metrics tend not to be the most consistent, 3) BUMP enables the measurement of metrics' performance on individual error types and highlights areas of weakness for future work.

Multi-head Uncertainty Inference for Adversarial Attack Detection

Deep neural networks (DNNs) are sensitive and susceptible to tiny perturbation by adversarial attacks which causes erroneous predictions. Various methods, including adversarial defense and uncertainty inference (UI), have been developed in recent years to overcome the adversarial attacks. In this paper, we propose a multi-head uncertainty inference (MH-UI) framework for detecting adversarial attack examples. We adopt a multi-head architecture with multiple prediction heads (i.e., classifiers) to obtain predictions from different depths in the DNNs and introduce shallow information for the UI. Using independent heads at different depths, the normalized predictions are assumed to follow the same Dirichlet distribution, and we estimate distribution parameter of it by moment matching. Cognitive uncertainty brought by the adversarial attacks will be reflected and amplified on the distribution. Experimental results show that the proposed MH-UI framework can outperform all the referred UI methods in the adversarial attack detection task with different settings.

MyoPS-Net: Myocardial Pathology Segmentation with Flexible Combination of Multi-Sequence CMR Images

Myocardial pathology segmentation (MyoPS) can be a prerequisite for the accurate diagnosis and treatment planning of myocardial infarction. However, achieving this segmentation is challenging, mainly due to the inadequate and indistinct information from an image. In this work, we develop an end-to-end deep neural network, referred to as MyoPS-Net, to flexibly combine five-sequence cardiac magnetic resonance (CMR) images for MyoPS. To extract precise and adequate information, we design an effective yet flexible architecture to extract and fuse cross-modal features. This architecture can tackle different numbers of CMR images and complex combinations of modalities, with output branches targeting specific pathologies. To impose anatomical knowledge on the segmentation results, we first propose a module to regularize myocardium consistency and localize the pathologies, and then introduce an inclusiveness loss to utilize relations between myocardial scars and edema. We evaluated the proposed MyoPS-Net on two datasets, i.e., a private one consisting of 50 paired multi-sequence CMR images and a public one from MICCAI2020 MyoPS Challenge. Experimental results showed that MyoPS-Net could achieve state-of-the-art performance in various scenarios. Note that in practical clinics, the subjects may not have full sequences, such as missing LGE CMR or mapping CMR scans. We therefore conducted extensive experiments to investigate the performance of the proposed method in dealing with such complex combinations of different CMR sequences. Results proved the superiority and generalizability of MyoPS-Net, and more importantly, indicated a practical clinical application.

CrisisLTLSum: A Benchmark for Local Crisis Event Timeline Extraction and Summarization

Social media has increasingly played a key role in emergency response: first responders can use public posts to better react to ongoing crisis events and deploy the necessary resources where they are most needed. Timeline extraction and abstractive summarization are critical technical tasks to leverage large numbers of social media posts about events. Unfortunately, there are few datasets for benchmarking technical approaches for those tasks. This paper presents CrisisLTLSum, the largest dataset of local crisis event timelines available to date. CrisisLTLSum contains 1,000 crisis event timelines across four domains: wildfires, local fires, traffic, and storms. We built CrisisLTLSum using a semi-automated cluster-then-refine approach to collect data from the public Twitter stream. Our initial experiments indicate a significant gap between the performance of strong baselines compared to the human performance on both tasks. Our dataset, code, and models are publicly available.

Transformers Improve Breast Cancer Diagnosis from Unregistered Multi-View Mammograms

Deep convolutional neural networks (CNNs) have been widely used in various medical imaging tasks. However, due to the intrinsic locality of convolution operation, CNNs generally cannot model long-range dependencies well, which are important for accurately identifying or mapping corresponding breast lesion features computed from unregistered multiple mammograms. This motivates us to leverage the architecture of Multi-view Vision Transformers to capture long-range relationships of multiple mammograms from the same patient in one examination. For this purpose, we employ local Transformer blocks to separately learn patch relationships within four mammograms acquired from two-view (CC/MLO) of two-side (right/left) breasts. The outputs from different views and sides are concatenated and fed into global Transformer blocks, to jointly learn patch relationships between four images representing two different views of the left and right breasts. To evaluate the proposed model, we retrospectively assembled a dataset involving 949 sets of mammograms, which include 470 malignant cases and 479 normal or benign cases. We trained and evaluated the model using a five-fold cross-validation method. Without any arduous preprocessing steps (e.g., optimal window cropping, chest wall or pectoral muscle removal, two-view image registration, etc.), our four-image (two-view-two-side) Transformer-based model achieves case classification performance with an area under ROC curve (AUC = 0.818), which significantly outperforms AUC = 0.784 achieved by the state-of-the-art multi-view CNNs (p = 0.009). It also outperforms two one-view-two-side models that achieve AUC of 0.724 (CC view) and 0.769 (MLO view), respectively. The study demonstrates the potential of using Transformers to develop high-performing computer-aided diagnosis schemes that combine four mammograms.

Deep Compatible Learning for Partially-Supervised Medical Image Segmentation

Partially-supervised learning can be challenging for segmentation due to the lack of supervision for unlabeled structures, and the methods directly applying fully-supervised learning could lead to incompatibility, meaning ground truth is not in the solution set of the optimization problem given the loss function. To address the challenge, we propose a deep compatible learning (DCL) framework, which trains a single multi-label segmentation network using images with only partial structures annotated. We first formulate the partially-supervised segmentation as an optimization problem compatible with missing labels, and prove its compatibility. Then, we equip the model with a conditional segmentation strategy, to propagate labels from multiple partially-annotated images to the target. Additionally, we propose a dual learning strategy, which learns two opposite mappings of label propagation simultaneously, to provide substantial supervision for unlabeled structures. The two strategies are formulated into compatible forms, termed as conditional compatibility and dual compatibility, respectively. We show this framework is generally applicable for conventional loss functions. The approach attains significant performance improvement over existing methods, especially in the situation where only a small training dataset is available. Results on three segmentation tasks have shown that the proposed framework could achieve performance matching fully-supervised models.

An Exploration of Post-Editing Effectiveness in Text Summarization

Automatic summarization methods are efficient but can suffer from low quality. In comparison, manual summarization is expensive but produces higher quality. Can humans and AI collaborate to improve summarization performance? In similar text generation tasks (e.g., machine translation), human-AI collaboration in the form of "post-editing" AI-generated text reduces human workload and improves the quality of AI output. Therefore, we explored whether post-editing offers advantages in text summarization. Specifically, we conducted an experiment with 72 participants, comparing post-editing provided summaries with manual summarization for summary quality, human efficiency, and user experience on formal (XSum news) and informal (Reddit posts) text. This study sheds valuable insights on when post-editing is useful for text summarization: it helped in some cases (e.g., when participants lacked domain knowledge) but not in others (e.g., when provided summaries include inaccurate information). Participants' different editing strategies and needs for assistance offer implications for future human-AI summarization systems.