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SODA: A Natural Language Processing Package to Extract Social Determinants of Health for Cancer Studies


Dec 06, 2022
Zehao Yu, Xi Yang, Chong Dang, Prakash Adekkanattu, Braja Gopal Patra, Yifan Peng, Jyotishman Pathak, Debbie L. Wilson, Ching-Yuan Chang, Wei-Hsuan Lo-Ciganic, Thomas J. George, William R. Hogan, Yi Guo, Jiang Bian, Yonghui Wu

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A Study of Social and Behavioral Determinants of Health in Lung Cancer Patients Using Transformers-based Natural Language Processing Models


Aug 10, 2021
Zehao Yu, Xi Yang, Chong Dang, Songzi Wu, Prakash Adekkanattu, Jyotishman Pathak, Thomas J. George, William R. Hogan, Yi Guo, Jiang Bian, Yonghui Wu

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* 9 pages; 2 figures, 4 tables, AMIA 2021 

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Characterization of Time-variant and Time-invariant Assessment of Suicidality on Reddit using C-SSRS


Apr 09, 2021
Manas Gaur, Vamsi Aribandi, Amanuel Alambo, Ugur Kursuncu, Krishnaprasad Thirunarayan, Jonanthan Beich, Jyotishman Pathak, Amit Sheth

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* 24 Pages, 8 Tables, 6 Figures; Accepted by PLoS One ; One of the two mentioned Datasets in the manuscript has Closed Access. We will make it public after PLoS One produces the manuscript 

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A Machine Learning Approach to Detect Suicidal Ideation in US Veterans Based on Acoustic and Linguistic Features of Speech


Sep 27, 2020
Vaibhav Sourirajan, Anas Belouali, Mary Ann Dutton, Matthew Reinhard, Jyotishman Pathak

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Identification of Predictive Sub-Phenotypes of Acute Kidney Injury using Structured and Unstructured Electronic Health Record Data with Memory Networks


Apr 10, 2019
Zhenxing Xu, Jingyuan Chou, Xi Sheryl Zhang, Yuan Luo, Tamara Isakova, Prakash Adekkanattu, Jessica S. Ancker, Guoqian Jiang, Richard C. Kiefer, Jennifer A. Pacheco, Luke V. Rasmussen, Jyotishman Pathak, Fei Wang

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Evaluating the Portability of an NLP System for Processing Echocardiograms: A Retrospective, Multi-site Observational Study


Apr 02, 2019
Prakash Adekkanattu, Guoqian Jiang, Yuan Luo, Paul R. Kingsbury, Zhenxing Xu, Luke V. Rasmussen, Jennifer A. Pacheco, Richard C. Kiefer, Daniel J. Stone, Pascal S. Brandt, Liang Yao, Yizhen Zhong, Yu Deng, Fei Wang, Jessica S. Ancker, Thomas R. Campion, Jyotishman Pathak

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* Under review with AMIA 2019 

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Fusing Visual, Textual and Connectivity Clues for Studying Mental Health


Feb 19, 2019
Amir Hossein Yazdavar, Mohammad Saeid Mahdavinejad, Goonmeet Bajaj, William Romine, Amirhassan Monadjemi, Krishnaprasad Thirunarayan, Amit Sheth, Jyotishman Pathak

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Developing a Portable Natural Language Processing Based Phenotyping System


Jul 17, 2018
Himanshu Sharma, Chengsheng Mao, Yizhen Zhang, Haleh Vatani, Liang Yao, Yizhen Zhong, Luke Rasmussen, Guoqian Jiang, Jyotishman Pathak, Yuan Luo

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* 13 pages 

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Semi-Supervised Approach to Monitoring Clinical Depressive Symptoms in Social Media


Oct 16, 2017
Amir Hossein Yazdavar, Hussein S. Al-Olimat, Monireh Ebrahimi, Goonmeet Bajaj, Tanvi Banerjee, Krishnaprasad Thirunarayan, Jyotishman Pathak, Amit Sheth

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* 8 pages, Advances in Social Networks Analysis and Mining (ASONAM), 2017 IEEE/ACM International Conference 

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