Polarimetric PatchMatch Multi-View Stereo

PatchMatch Multi-View Stereo (PatchMatch MVS) is one of the popular MVS approaches, owing to its balanced accuracy and efficiency. In this paper, we propose Polarimetric PatchMatch multi-view Stereo (PolarPMS), which is the first method exploiting polarization cues to PatchMatch MVS. The key of PatchMatch MVS is to generate depth and normal hypotheses, which form local 3D planes and slanted stereo matching windows, and efficiently search for the best hypothesis based on the consistency among multi-view images. In addition to standard photometric consistency, our PolarPMS evaluates polarimetric consistency to assess the validness of a depth and normal hypothesis, motivated by the physical property that the polarimetric information is related to the object's surface normal. Experimental results demonstrate that our PolarPMS can improve the accuracy and the completeness of reconstructed 3D models, especially for texture-less surfaces, compared with state-of-the-art PatchMatch MVS methods.

Polarimetric Multi-View Inverse Rendering

A polarization camera has great potential for 3D reconstruction since the angle of polarization (AoP) and the degree of polarization (DoP) of reflected light are related to an object's surface normal. In this paper, we propose a novel 3D reconstruction method called Polarimetric Multi-View Inverse Rendering (Polarimetric MVIR) that effectively exploits geometric, photometric, and polarimetric cues extracted from input multi-view color-polarization images. We first estimate camera poses and an initial 3D model by geometric reconstruction with a standard structure-from-motion and multi-view stereo pipeline. We then refine the initial model by optimizing photometric rendering errors and polarimetric errors using multi-view RGB, AoP, and DoP images, where we propose a novel polarimetric cost function that enables an effective constraint on the estimated surface normal of each vertex, while considering four possible ambiguous azimuth angles revealed from the AoP measurement. The weight for the polarimetric cost is effectively determined based on the DoP measurement, which is regarded as the reliability of polarimetric information. Experimental results using both synthetic and real data demonstrate that our Polarimetric MVIR can reconstruct a detailed 3D shape without assuming a specific surface material and lighting condition.

A new method incorporating deep learning with shape priors for left ventricular segmentation in myocardial perfusion SPECT images

Background: The assessment of left ventricular (LV) function by myocardial perfusion SPECT (MPS) relies on accurate myocardial segmentation. The purpose of this paper is to develop and validate a new method incorporating deep learning with shape priors to accurately extract the LV myocardium for automatic measurement of LV functional parameters. Methods: A segmentation architecture that integrates a three-dimensional (3D) V-Net with a shape deformation module was developed. Using the shape priors generated by a dynamic programming (DP) algorithm, the model output was then constrained and guided during the model training for quick convergence and improved performance. A stratified 5-fold cross-validation was used to train and validate our models. Results: Results of our proposed method agree well with those from the ground truth. Our proposed model achieved a Dice similarity coefficient (DSC) of 0.9573(0.0244), 0.9821(0.0137), and 0.9903(0.0041), a Hausdorff distances (HD) of 6.7529(2.7334) mm, 7.2507(3.1952) mm, and 7.6121(3.0134) mm in extracting the endocardium, myocardium, and epicardium, respectively. Conclusion: Our proposed method achieved a high accuracy in extracting LV myocardial contours and assessing LV function.

Unsupervised Embedding of Hierarchical Structure in Euclidean Space

Deep embedding methods have influenced many areas of unsupervised learning. However, the best methods for learning hierarchical structure use non-Euclidean representations, whereas Euclidean geometry underlies the theory behind many hierarchical clustering algorithms. To bridge the gap between these two areas, we consider learning a non-linear embedding of data into Euclidean space as a way to improve the hierarchical clustering produced by agglomerative algorithms. To learn the embedding, we revisit using a variational autoencoder with a Gaussian mixture prior, and we show that rescaling the latent space embedding and then applying Ward's linkage-based algorithm leads to improved results for both dendrogram purity and the Moseley-Wang cost function. Finally, we complement our empirical results with a theoretical explanation of the success of this approach. We study a synthetic model of the embedded vectors and prove that Ward's method exactly recovers the planted hierarchical clustering with high probability.

COVID-CT-Dataset: A CT Scan Dataset about COVID-19

CT scans are promising in providing accurate, fast, and cheap screening and testing of COVID-19. In this paper, we build a publicly available COVID-CT dataset, containing 275 CT scans that are positive for COVID-19, to foster the research and development of deep learning methods which predict whether a person is affected with COVID-19 by analyzing his/her CTs. We train a deep convolutional neural network on this dataset and achieve an F1 of 0.85 which is a promising performance but yet to be further improved. The data and code are available at https://github.com/UCSD-AI4H/COVID-CT

Melodic Phrase Segmentation By Deep Neural Networks

Automated melodic phrase detection and segmentation is a classical task in content-based music information retrieval and also the key towards automated music structure analysis. However, traditional methods still cannot satisfy practical requirements. In this paper, we explore and adapt various neural network architectures to see if they can be generalized to work with the symbolic representation of music and produce satisfactory melodic phrase segmentation. The main issue of applying deep-learning methods to phrase detection is the sparse labeling problem of training sets. We proposed two tailored label engineering with corresponding training techniques for different neural networks in order to make decisions at a sequential level. Experiment results show that the CNN-CRF architecture performs the best, being able to offer finer segmentation and faster to train, while CNN, Bi-LSTM-CNN and Bi-LSTM-CRF are acceptable alternatives.