ipA-MedGAN: Inpainting of Arbitrarily Regions in Medical Modalities

Local deformations in medical modalities are common phenomena due to a multitude of factors such as metallic implants or limited field of views in magnetic resonance imaging (MRI). Completion of the missing or distorted regions is of special interest for automatic image analysis frameworks to enhance post-processing tasks such as segmentation or classification. In this work, we propose a new generative framework for medical image inpainting, titled ipA-MedGAN. It bypasses the limitations of previous frameworks by enabling inpainting of arbitrarily shaped regions without a prior localization of the regions of interest. Thorough qualitative and quantitative comparisons with other inpainting and translational approaches have illustrated the superior performance of the proposed framework for the task of brain MR inpainting.

Organ-based Age Estimation based on 3D MRI Scans

Individuals age differently depending on a multitude of different factors such as lifestyle, medical history and genetics. Often, the global chronological age is not indicative of the true ageing process. An organ-based age estimation would yield a more accurate health state assessment. In this work, we propose a new deep learning architecture for organ-based age estimation based on magnetic resonance images (MRI). The proposed network is a 3D convolutional neural network (CNN) with increased depth and width made possible by the hybrid utilization of inception and fire modules. We apply the proposed framework for the tasks of brain and knee age estimation. Quantitative comparisons against concurrent MR-based regression networks illustrated the superior performance of the proposed work.

Unsupervised Adversarial Correction of Rigid MR Motion Artifacts

Motion is one of the main sources for artifacts in magnetic resonance (MR) images. It can have significant consequences on the diagnostic quality of the resultant scans. Previously, supervised adversarial approaches have been suggested for the correction of MR motion artifacts. However, these approaches suffer from the limitation of required paired co-registered datasets for training which are often hard or impossible to acquire. Building upon our previous work, we introduce a new adversarial framework with a new generator architecture and loss function for the unsupervised correction of severe rigid motion artifacts in the brain region. Quantitative and qualitative comparisons with other supervised and unsupervised translation approaches showcase the enhanced performance of the introduced framework.

Enhancing Flood Impact Analysis using Interactive Retrieval of Social Media Images

The analysis of natural disasters such as floods in a timely manner often suffers from limited data due to a coarse distribution of sensors or sensor failures. This limitation could be alleviated by leveraging information contained in images of the event posted on social media platforms, so-called "Volunteered Geographic Information (VGI)". To save the analyst from the need to inspect all images posted online manually, we propose to use content-based image retrieval with the possibility of relevance feedback for retrieving only relevant images of the event to be analyzed. To evaluate this approach, we introduce a new dataset of 3,710 flood images, annotated by domain experts regarding their relevance with respect to three tasks (determining the flooded area, inundation depth, water pollution). We compare several image features and relevance feedback methods on that dataset, mixed with 97,085 distractor images, and are able to improve the precision among the top 100 retrieval results from 55% with the baseline retrieval to 87% after 5 rounds of feedback.

PathRank: A Multi-Task Learning Framework to Rank Paths in Spatial Networks

Modern navigation services often provide multiple paths connecting the same source and destination for users to select. Hence, ranking such paths becomes increasingly important, which directly affects the service quality. We present PathRank, a data-driven framework for ranking paths based on historical trajectories using multi-task learning. If a trajectory used path P from source s to destination d, PathRank considers this as an evidence that P is preferred over all other paths from s to d. Thus, a path that is similar to P should have a larger ranking score than a path that is dissimilar to P. Based on this intuition, PathRank models path ranking as a regression problem, where each path is associated with a ranking score. To enable PathRank, we first propose an effective method to generate a compact set of training data: for each trajectory, we generate a small set of diversified paths. Next, we propose a multi-task learning framework to solve the regression problem. In particular, a spatial network embedding is proposed to embed each vertex to a feature vector by considering both road network topology and spatial properties, such as distances and travel times. Since a path is represented by a sequence of vertices, which is now a sequence of feature vectors after embedding, recurrent neural network is applied to model the sequence. The objective function is designed to consider errors on both ranking scores and spatial properties, making the framework a multi-task learning framework. Empirical studies on a substantial trajectory data set offer insight into the designed properties of the proposed framework and indicating that it is effective and practical.

Localizing Catastrophic Forgetting in Neural Networks

Artificial neural networks (ANNs) suffer from catastrophic forgetting when trained on a sequence of tasks. While this phenomenon was studied in the past, there is only very limited recent research on this phenomenon. We propose a method for determining the contribution of individual parameters in an ANN to catastrophic forgetting. The method is used to analyze an ANNs response to three different continual learning scenarios.

2-bit Model Compression of Deep Convolutional Neural Network on ASIC Engine for Image Retrieval

Image retrieval utilizes image descriptors to retrieve the most similar images to a given query image. Convolutional neural network (CNN) is becoming the dominant approach to extract image descriptors for image retrieval. For low-power hardware implementation of image retrieval, the drawback of CNN-based feature descriptor is that it requires hundreds of megabytes of storage. To address this problem, this paper applies deep model quantization and compression to CNN in ASIC chip for image retrieval. It is demonstrated that the CNN-based features descriptor can be extracted using as few as 2-bit weights quantization to deliver a similar performance as floating-point model for image retrieval. In addition, to implement CNN in ASIC, especially for large scale images, the limited buffer size of chips should be considered. To retrieve large scale images, we propose an improved pooling strategy, region nested invariance pooling (RNIP), which uses cropped sub-images for CNN. Testing results on chip show that integrating RNIP with the proposed 2-bit CNN model compression approach is capable of retrieving large scale images.

Deep One-Class Classification Using Intra-Class Splitting

This paper introduces a generic method which enables to use conventional deep neural networks as end-to-end one-class classifiers. The method is based on splitting given data from one class into two subsets. In one-class classification, only samples of one normal class are available for training. During inference, a closed and tight decision boundary around the training samples is sought which conventional binary or multi-class neural networks are not able to provide. By splitting data into typical and atypical normal subsets, the proposed method can use a binary loss and defines an auxiliary subnetwork for distance constraints in the latent space. Various experiments on three well-known image datasets showed the effectiveness of the proposed method which outperformed seven baselines and had a better or comparable performance to the state-of-the-art.

Open-Set Recognition Using Intra-Class Splitting

This paper proposes a method to use deep neural networks as end-to-end open-set classifiers. It is based on intra-class data splitting. In open-set recognition, only samples from a limited number of known classes are available for training. During inference, an open-set classifier must reject samples from unknown classes while correctly classifying samples from known classes. The proposed method splits given data into typical and atypical normal subsets by using a closed-set classifier. This enables to model the abnormal classes by atypical normal samples. Accordingly, the open-set recognition problem is reformulated into a traditional classification problem. In addition, a closed-set regularization is proposed to guarantee a high closed-set classification performance. Intensive experiments on five well-known image datasets showed the effectiveness of the proposed method which outperformed the baselines and achieved a distinct improvement over the state-of-the-art methods.

Unsupervised Medical Image Translation Using Cycle-MedGAN

Image-to-image translation is a new field in computer vision with multiple potential applications in the medical domain. However, for supervised image translation frameworks, co-registered datasets, paired in a pixel-wise sense, are required. This is often difficult to acquire in realistic medical scenarios. On the other hand, unsupervised translation frameworks often result in blurred translated images with unrealistic details. In this work, we propose a new unsupervised translation framework which is titled Cycle-MedGAN. The proposed framework utilizes new non-adversarial cycle losses which direct the framework to minimize the textural and perceptual discrepancies in the translated images. Qualitative and quantitative comparisons against other unsupervised translation approaches demonstrate the performance of the proposed framework for PET-CT translation and MR motion correction.