The analysis of nonstationary time series is of great importance in many scientific fields such as physics and neuroscience. In recent years, Gaussian process regression has attracted substantial attention as a robust and powerful method for analyzing time series. In this paper, we introduce a new framework for analyzing nonstationary time series using locally stationary Gaussian process analysis with parameters that are coupled through a hidden Markov model. The main advantage of this framework is that arbitrary complex nonstationary covariance functions can be obtained by combining simpler stationary building blocks whose hidden parameters can be estimated in closed-form. We demonstrate the flexibility of the method by analyzing two examples of synthetic nonstationary signals: oscillations with time varying frequency and time series with two dynamical states. Finally, we report an example application on real magnetoencephalographic measurements of brain activity.
Over the last few years, traffic data has been exploding and the transportation discipline has entered the era of big data. It brings out new opportunities for doing data-driven analysis, but it also challenges traditional analytic methods. This paper proposes a new Divide and Combine based approach to do K means clustering on activity-travel behavior time series using features that are derived using tools in Time Series Analysis and Topological Data Analysis. Clustering data from five waves of the National Household Travel Survey ranging from 1990 to 2017 suggests that activity-travel patterns of individuals over the last three decades can be grouped into three clusters. Results also provide evidence in support of recent claims about differences in activity-travel patterns of different survey cohorts. The proposed method is generally applicable and is not limited only to activity-travel behavior analysis in transportation studies. Driving behavior, travel mode choice, household vehicle ownership, when being characterized as categorical time series, can all be analyzed using the proposed method.
The decomposition of a time series is an essential task that helps to understand its very nature. It facilitates the analysis and forecasting of complex time series expressing various hidden components such as the trend, seasonal components, cyclic components and irregular fluctuations. Therefore, it is crucial in many fields for forecasting and decision processes. In recent years, many methods of time series decomposition have been developed, which extract and reveal different time series properties. Unfortunately, they neglect a very important property, i.e. time series variance. To deal with heteroscedasticity in time series, the method proposed in this work -- a seasonal-trend-dispersion decomposition (STD) -- extracts the trend, seasonal component and component related to the dispersion of the time series. We define STD decomposition in two ways: with and without an irregular component. We show how STD can be used for time series analysis and forecasting.
Feature-based time series representation has attracted substantial attention in a wide range of time series analysis methods. Recently, the use of time series features for forecast model selection and model averaging has been an emerging research focus in the forecasting community. Nonetheless, most of the existing approaches depend on the manual choice of an appropriate set of features. Exploiting machine learning methods to automatically extract features from time series becomes crucially important in the state-of-the-art time series analysis. In this paper, we introduce an automated approach to extract time series features based on images. Time series are first transformed into recurrence images, from which local features can be extracted using computer vision algorithms. The extracted features are used for forecast model selection and model averaging. Our experiments show that forecasting based on automatically extracted features, with less human intervention and a more comprehensive view of the raw time series data, yields comparable performances with the top best methods proposed in the largest forecasting competition M4.
This paper formulates the problem of learning discriminative features (\textit{i.e.,} segments) from networked time series data considering the linked information among time series. For example, social network users are considered to be social sensors that continuously generate social signals (tweets) represented as a time series. The discriminative segments are often referred to as \emph{shapelets} in a time series. Extracting shapelets for time series classification has been widely studied. However, existing works on shapelet selection assume that the time series are independent and identically distributed (i.i.d.). This assumption restricts their applications to social networked time series analysis, since a user's actions can be correlated to his/her social affiliations. In this paper we propose a new Network Regularized Least Squares (NetRLS) feature selection model that combines typical time series data and user network data for analysis. Experiments on real-world networked time series Twitter and DBLP data demonstrate the performance of the proposed method. NetRLS performs better than LTS, the state-of-the-art time series feature selection approach, on real-world data.
Time series forecasting is widely used in business intelligence, e.g., forecast stock market price, sales, and help the analysis of data trend. Most time series of interest are macroscopic time series that are aggregated from microscopic data. However, instead of directly modeling the macroscopic time series, rare literature studied the forecasting of macroscopic time series by leveraging data on the microscopic level. In this paper, we assume that the microscopic time series follow some unknown mixture probabilistic distributions. We theoretically show that as we identify the ground truth latent mixture components, the estimation of time series from each component could be improved because of lower variance, thus benefitting the estimation of macroscopic time series as well. Inspired by the power of Seq2seq and its variants on the modeling of time series data, we propose Mixture of Seq2seq (MixSeq), an end2end mixture model to cluster microscopic time series, where all the components come from a family of Seq2seq models parameterized by different parameters. Extensive experiments on both synthetic and real-world data show the superiority of our approach.
In this paper, we propose a technique for time series clustering using community detection in complex networks. Firstly, we present a method to transform a set of time series into a network using different distance functions, where each time series is represented by a vertex and the most similar ones are connected. Then, we apply community detection algorithms to identify groups of strongly connected vertices (called a community) and, consequently, identify time series clusters. Still in this paper, we make a comprehensive analysis on the influence of various combinations of time series distance functions, network generation methods and community detection techniques on clustering results. Experimental study shows that the proposed network-based approach achieves better results than various classic or up-to-date clustering techniques under consideration. Statistical tests confirm that the proposed method outperforms some classic clustering algorithms, such as $k$-medoids, diana, median-linkage and centroid-linkage in various data sets. Interestingly, the proposed method can effectively detect shape patterns presented in time series due to the topological structure of the underlying network constructed in the clustering process. At the same time, other techniques fail to identify such patterns. Moreover, the proposed method is robust enough to group time series presenting similar pattern but with time shifts and/or amplitude variations. In summary, the main point of the proposed method is the transformation of time series from time-space domain to topological domain. Therefore, we hope that our approach contributes not only for time series clustering, but also for general time series analysis tasks.
We analyze a variant of multivariate singular spectrum analysis (mSSA), a widely used multivariate time series method, which we find to perform competitively with respect to the state-of-art neural network time series methods (LSTM, DeepAR). Its restriction for single time series, singular spectrum analysis (SSA), has been analyzed recently. Despite its popularity, theoretical understanding of mSSA is absent. Towards this, we introduce a natural spatio-temporal factor model to analyze mSSA. We establish the in-sample prediction error for imputation and forecasting under mSSA scales as $1/\sqrt{NT}$, for $N$ time series with $T$ observations per time series. In contrast, for SSA the error scales as $1/\sqrt{T}$ and for matrix factorization based time series methods, the error scales as ${1}/{\min(N, T)}$. We utilize an online learning framework to analyze the one-step-ahead prediction error of mSSA and establish it has a regret of ${1}/{(\sqrt{N}T^{0.04})}$ with respect to in-sample forecasting error. By applying mSSA on the square of the time series observations, we furnish an algorithm to estimate the time-varying variance of a time series and establish it has in-sample imputation / forecasting error scaling as $1/\sqrt{NT}$. To establish our results, we make three technical contributions. First, we establish that the "stacked" Page Matrix time series representation, the core data structure in mSSA, has an approximate low-rank structure for a large class of time series models used in practice under the spatio-temporal factor model. Second, we extend the theory of online convex optimization to address the variant when the constraints are time-varying. Third, we extend the analysis prediction error analysis of Principle Component Regression beyond recent work to when the covariate matrix is approximately low-rank.
We introduce large-scale Augmented Granger Causality (lsAGC) as a method for connectivity analysis in complex systems. The lsAGC algorithm combines dimension reduction with source time-series augmentation and uses predictive time-series modeling for estimating directed causal relationships among time-series. This method is a multivariate approach, since it is capable of identifying the influence of each time-series on any other time-series in the presence of all other time-series of the underlying dynamic system. We quantitatively evaluate the performance of lsAGC on synthetic directional time-series networks with known ground truth. As a reference method, we compare our results with cross-correlation, which is typically used as a standard measure of connectivity in the functional MRI (fMRI) literature. Using extensive simulations for a wide range of time-series lengths and two different signal-to-noise ratios of 5 and 15 dB, lsAGC consistently outperforms cross-correlation at accurately detecting network connections, using Receiver Operator Characteristic Curve (ROC) analysis, across all tested time-series lengths and noise levels. In addition, as an outlook to possible clinical application, we perform a preliminary qualitative analysis of connectivity matrices for fMRI data of Autism Spectrum Disorder (ASD) patients and typical controls, using a subset of 59 subjects of the Autism Brain Imaging Data Exchange II (ABIDE II) data repository. Our results suggest that lsAGC, by extracting sparse connectivity matrices, may be useful for network analysis in complex systems, and may be applicable to clinical fMRI analysis in future research, such as targeting disease-related classification or regression tasks on clinical data.
Time series data are fundamental for a variety of applications, ranging from financial markets to energy systems. Due to their importance, the number and complexity of tools and methods used for time series analysis is constantly increasing. However, due to unclear APIs and a lack of documentation, researchers struggle to integrate them into their research projects and replicate results. Additionally, in time series analysis there exist many repetitive tasks, which are often re-implemented for each project, unnecessarily costing time. To solve these problems we present \texttt{pyWATTS}, an open-source Python-based package that is a non-sequential workflow automation tool for the analysis of time series data. pyWATTS includes modules with clearly defined interfaces to enable seamless integration of new or existing methods, subpipelining to easily reproduce repetitive tasks, load and save functionality to simply replicate results, and native support for key Python machine learning libraries such as scikit-learn, PyTorch, and Keras.
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