Knowledge Reasoning of Large Language Models Integrating Graph-Structured Information for Pest and Disease Control in Tobacco

This paper proposes a large language model (LLM) approach that integrates graph-structured information for knowledge reasoning in tobacco pest and disease control. Built upon the GraphRAG framework, the proposed method enhances knowledge retrieval and reasoning by explicitly incorporating structured information from a domain-specific knowledge graph. Specifically, LLMs are first leveraged to assist in the construction of a tobacco pest and disease knowledge graph, which organizes key entities such as diseases, symptoms, control methods, and their relationships. Based on this graph, relevant knowledge is retrieved and integrated into the reasoning process to support accurate answer generation. The Transformer architecture is adopted as the core inference model, while a graph neural network (GNN) is employed to learn expressive node representations that capture both local and global relational information within the knowledge graph. A ChatGLM-based model serves as the backbone LLM and is fine-tuned using LoRA to achieve parameter-efficient adaptation. Extensive experimental results demonstrate that the proposed approach consistently outperforms baseline methods across multiple evaluation metrics, significantly improving both the accuracy and depth of reasoning, particularly in complex multi-hop and comparative reasoning scenarios.

Global-Graph Guided and Local-Graph Weighted Contrastive Learning for Unified Clustering on Incomplete and Noise Multi-View Data

Recently, contrastive learning (CL) plays an important role in exploring complementary information for multi-view clustering (MVC) and has attracted increasing attention. Nevertheless, real-world multi-view data suffer from data incompleteness or noise, resulting in rare-paired samples or mis-paired samples which significantly challenges the effectiveness of CL-based MVC. That is, rare-paired issue prevents MVC from extracting sufficient multi-view complementary information, and mis-paired issue causes contrastive learning to optimize the model in the wrong direction. To address these issues, we propose a unified CL-based MVC framework for enhancing clustering effectiveness on incomplete and noise multi-view data. First, to overcome the rare-paired issue, we design a global-graph guided contrastive learning, where all view samples construct a global-view affinity graph to form new sample pairs for fully exploring complementary information. Second, to mitigate the mis-paired issue, we propose a local-graph weighted contrastive learning, which leverages local neighbors to generate pair-wise weights to adaptively strength or weaken the pair-wise contrastive learning. Our method is imputation-free and can be integrated into a unified global-local graph-guided contrastive learning framework. Extensive experiments on both incomplete and noise settings of multi-view data demonstrate that our method achieves superior performance compared with state-of-the-art approaches.

Enabling Conversational Behavior Reasoning Capabilities in Full-Duplex Speech

Human conversation is organized by an implicit chain of thoughts that manifests as timed speech acts. Capturing this causal pathway is key to building natural full-duplex interactive systems. We introduce a framework that enables reasoning over conversational behaviors by modeling this process as causal inference within a Graph-of-Thoughts (GoT). Our approach formalizes the intent-to-action pathway with a hierarchical labeling scheme, predicting high-level communicative intents and low-level speech acts to learn their causal and temporal dependencies. To train this system, we develop a hybrid corpus that pairs controllable, event-rich simulations with human-annotated rationales and real conversational speech. The GoT framework structures streaming predictions as an evolving graph, enabling a multimodal transformer to forecast the next speech act, generate concise justifications for its decisions, and dynamically refine its reasoning. Experiments on both synthetic and real duplex dialogues show that the framework delivers robust behavior detection, produces interpretable reasoning chains, and establishes a foundation for benchmarking conversational reasoning in full duplex spoken dialogue systems.

IoT-based Android Malware Detection Using Graph Neural Network With Adversarial Defense

Since the Internet of Things (IoT) is widely adopted using Android applications, detecting malicious Android apps is essential. In recent years, Android graph-based deep learning research has proposed many approaches to extract relationships from applications as graphs to generate graph embeddings. First, we demonstrate the effectiveness of graph-based classification using a Graph Neural Network (GNN)-based classifier to generate API graph embeddings. The graph embeddings are combined with Permission and Intent features to train multiple machine learning and deep learning models for Android malware detection. The proposed classification approach achieves an accuracy of 98.33 percent on the CICMaldroid dataset and 98.68 percent on the Drebin dataset. However, graph-based deep learning models are vulnerable, as attackers can add fake relationships to evade detection by the classifier. Second, we propose a Generative Adversarial Network (GAN)-based attack algorithm named VGAE-MalGAN targeting graph-based GNN Android malware classifiers. The VGAE-MalGAN generator produces adversarial malware API graphs, while the VGAE-MalGAN substitute detector attempts to mimic the target detector. Experimental results show that VGAE-MalGAN can significantly reduce the detection rate of GNN-based malware classifiers. Although the model initially fails to detect adversarial malware, retraining with generated adversarial samples improves robustness and helps mitigate adversarial attacks.

M$^3$KG-RAG: Multi-hop Multimodal Knowledge Graph-enhanced Retrieval-Augmented Generation

Retrieval-Augmented Generation (RAG) has recently been extended to multimodal settings, connecting multimodal large language models (MLLMs) with vast corpora of external knowledge such as multimodal knowledge graphs (MMKGs). Despite their recent success, multimodal RAG in the audio-visual domain remains challenging due to 1) limited modality coverage and multi-hop connectivity of existing MMKGs, and 2) retrieval based solely on similarity in a shared multimodal embedding space, which fails to filter out off-topic or redundant knowledge. To address these limitations, we propose M$^3$KG-RAG, a Multi-hop Multimodal Knowledge Graph-enhanced RAG that retrieves query-aligned audio-visual knowledge from MMKGs, improving reasoning depth and answer faithfulness in MLLMs. Specifically, we devise a lightweight multi-agent pipeline to construct multi-hop MMKG (M$^3$KG), which contains context-enriched triplets of multimodal entities, enabling modality-wise retrieval based on input queries. Furthermore, we introduce GRASP (Grounded Retrieval And Selective Pruning), which ensures precise entity grounding to the query, evaluates answer-supporting relevance, and prunes redundant context to retain only knowledge essential for response generation. Extensive experiments across diverse multimodal benchmarks demonstrate that M$^3$KG-RAG significantly enhances MLLMs' multimodal reasoning and grounding over existing approaches.

Compressed Causal Reasoning: Quantization and GraphRAG Effects on Interventional and Counterfactual Accuracy

Causal reasoning in Large Language Models spanning association, intervention, and counterfactual inference is essential for reliable decision making in high stakes settings. As deployment shifts toward edge and resource constrained environments, quantized models such as INT8 and NF4 are becoming standard. Yet the impact of precision reduction on formal causal reasoning is poorly understood. To our knowledge, this is the first study to systematically evaluate quantization effects across all three levels of Pearls Causal Ladder. Using a 3000 sample stratified CLadder benchmark, we find that rung level accuracy in Llama 3 8B remains broadly stable under quantization, with NF4 showing less than one percent overall degradation. Interventional queries at rung 2 are the most sensitive to precision loss, whereas counterfactual reasoning at rung 3 is comparatively stable but exhibits heterogeneous weaknesses across query types such as collider bias and backdoor adjustment. Experiments on the CRASS benchmark show near identical performance across precisions, indicating that existing commonsense counterfactual datasets lack the structural sensitivity needed to reveal quantization induced reasoning drift. We further evaluate Graph Retrieval Augmented Generation using ground truth causal graphs and observe a consistent improvement in NF4 interventional accuracy of plus 1.7 percent, partially offsetting compression related degradation. These results suggest that causal reasoning is unexpectedly robust to four bit quantization, graph structured augmentation can selectively reinforce interventional reasoning, and current counterfactual benchmarks fail to capture deeper causal brittleness. This work provides an initial empirical map of compressed causal reasoning and practical guidance for deploying efficient and structurally supported causal AI systems.

SparScene: Efficient Traffic Scene Representation via Sparse Graph Learning for Large-Scale Trajectory Generation

Multi-agent trajectory generation is a core problem for autonomous driving and intelligent transportation systems. However, efficiently modeling the dynamic interactions between numerous road users and infrastructures in complex scenes remains an open problem. Existing methods typically employ distance-based or fully connected dense graph structures to capture interaction information, which not only introduces a large number of redundant edges but also requires complex and heavily parameterized networks for encoding, thereby resulting in low training and inference efficiency, limiting scalability to large and complex traffic scenes. To overcome the limitations of existing methods, we propose SparScene, a sparse graph learning framework designed for efficient and scalable traffic scene representation. Instead of relying on distance thresholds, SparScene leverages the lane graph topology to construct structure-aware sparse connections between agents and lanes, enabling efficient yet informative scene graph representation. SparScene adopts a lightweight graph encoder that efficiently aggregates agent-map and agent-agent interactions, yielding compact scene representations with substantially improved efficiency and scalability. On the motion prediction benchmark of the Waymo Open Motion Dataset (WOMD), SparScene achieves competitive performance with remarkable efficiency. It generates trajectories for more than 200 agents in a scene within 5 ms and scales to more than 5,000 agents and 17,000 lanes with merely 54 ms of inference time with a GPU memory of 2.9 GB, highlighting its superior scalability for large-scale traffic scenes.

Democratizing Drug Discovery with an Orchestrated, Knowledge-Driven Multi-Agent Team for User-Guided Therapeutic Design

Therapeutic discovery remains a formidable challenge, impeded by the fragmentation of specialized domains and the execution gap between computational design and physiological validation. Although generative AI offers promise, current models often function as passive assistants rather than as autonomous executors. Here, we introduce OrchestRA, a human-in-the-loop multi-agent platform that unifies biology, chemistry, and pharmacology into an autonomous discovery engine. Unlike static code generators, our agents actively execute simulations and reason the results to drive iterative optimization. Governed by an Orchestrator, a Biologist Agent leverages deep reasoning over a massive knowledge graph (>10 million associations) to pinpoint high-confidence targets; a Chemist Agent autonomously detects structural pockets for de novo design or drug repositioning; and a Pharmacologist Agent evaluates candidates via rigorous physiologically based pharmacokinetic (PBPK) simulations. This architecture establishes a dynamic feedback loop where pharmacokinetic and toxicity profiles directly trigger structural reoptimization. By seamlessly integrating autonomous execution with human guidance, OrchestRA democratizes therapeutic design, transforming drug discovery from a stochastic search to a programmable evidence-based engineering discipline.

DiEC: Diffusion Embedded Clustering

Deep clustering hinges on learning representations that are inherently clusterable. However, using a single encoder to produce a fixed embedding ignores the representation trajectory formed by a pretrained diffusion model across network hierarchies and noise timesteps, where clusterability varies substantially. We propose DiEC (Diffusion Embedded Clustering), which performs unsupervised clustering by directly reading internal activations from a pretrained diffusion U-Net. DiEC formulates representation selection as a two-dimensional search over layer x timestep, and exploits a weak-coupling property to decompose it into two stages. Specifically, we first fix the U-Net bottleneck layer as the Clustering-friendly Middle Layer (CML), and then use Optimal Timestep Search (OTS) to identify the clustering-optimal timestep (t*). During training, we extract bottleneck features at the fixed t* and obtain clustering representations via a lightweight residual mapping. We optimize a DEC-style KL self-training objective, augmented with adaptive graph regularization and entropy regularization to strengthen cluster structures. In parallel, we introduce a denoising-consistency branch at random timesteps to stabilize the representations and preserve generative consistency. Experiments show that DiEC achieves competitive clustering performance on multiple standard benchmarks.

Feature-Enhanced Graph Neural Networks for Classification of Synthetic Graph Generative Models: A Benchmarking Study

The ability to discriminate between generative graph models is critical to understanding complex structural patterns in both synthetic graphs and the real-world structures that they emulate. While Graph Neural Networks (GNNs) have seen increasing use to great effect in graph classification tasks, few studies explore their integration with interpretable graph theoretic features. This paper investigates the classification of synthetic graph families using a hybrid approach that combines GNNs with engineered graph-theoretic features. We generate a large and structurally diverse synthetic dataset comprising graphs from five representative generative families, Erdos-Renyi, Watts-Strogatz, Barab'asi-Albert, Holme-Kim, and Stochastic Block Model. These graphs range in size up to 1x10^4 nodes, containing up to 1.1x10^5 edges. A comprehensive range of node and graph level features is extracted for each graph and pruned using a Random Forest based feature selection pipeline. The features are integrated into six GNN architectures: GCN, GAT, GATv2, GIN, GraphSAGE and GTN. Each architecture is optimised for hyperparameter selection using Optuna. Finally, models were compared against a baseline Support Vector Machine (SVM) trained solely on the handcrafted features. Our evaluation demonstrates that GraphSAGE and GTN achieve the highest classification performance, with 98.5% accuracy, and strong class separation evidenced by t-SNE and UMAP visualisations. GCN and GIN also performed well, while GAT-based models lagged due to limitations in their ability to capture global structures. The SVM baseline confirmed the importance of the message passing functionality for performance gains and meaningful class separation.