WeakSurg: Weakly supervised surgical instrument segmentation using temporal equivariance and semantic continuity

Weakly supervised surgical instrument segmentation with only instrument presence labels has been rarely explored in surgical domain. To mitigate the highly under-constrained challenges, we extend a two-stage weakly supervised segmentation paradigm with temporal attributes from two perspectives. From a temporal equivariance perspective, we propose a prototype-based temporal equivariance regulation loss to enhance pixel-wise consistency between adjacent features. From a semantic continuity perspective, we propose a class-aware temporal semantic continuity loss to constrain the semantic consistency between a global view of target frame and local non-discriminative regions of adjacent reference frame. To the best of our knowledge, WeakSurg is the first instrument-presence-only weakly supervised segmentation architecture to take temporal information into account for surgical scenarios. Extensive experiments are validated on Cholec80, an open benchmark for phase and instrument recognition. We annotate instance-wise instrument labels with fixed time-steps which are double checked by a clinician with 3-years experience. Our results show that WeakSurg compares favorably with state-of-the-art methods not only on semantic segmentation metrics but also on instance segmentation metrics.

FinMem: A Performance-Enhanced LLM Trading Agent with Layered Memory and Character Design

Recent advancements in Large Language Models (LLMs) have exhibited notable efficacy in question-answering (QA) tasks across diverse domains. Their prowess in integrating extensive web knowledge has fueled interest in developing LLM-based autonomous agents. While LLMs are efficient in decoding human instructions and deriving solutions by holistically processing historical inputs, transitioning to purpose-driven agents requires a supplementary rational architecture to process multi-source information, establish reasoning chains, and prioritize critical tasks. Addressing this, we introduce \textsc{FinMem}, a novel LLM-based agent framework devised for financial decision-making. It encompasses three core modules: Profiling, to customize the agent's characteristics; Memory, with layered message processing, to aid the agent in assimilating hierarchical financial data; and Decision-making, to convert insights gained from memories into investment decisions. Notably, \textsc{FinMem}'s memory module aligns closely with the cognitive structure of human traders, offering robust interpretability and real-time tuning. Its adjustable cognitive span allows for the retention of critical information beyond human perceptual limits, thereby enhancing trading outcomes. This framework enables the agent to self-evolve its professional knowledge, react agilely to new investment cues, and continuously refine trading decisions in the volatile financial environment. We first compare \textsc{FinMem} with various algorithmic agents on a scalable real-world financial dataset, underscoring its leading trading performance in stocks. We then fine-tuned the agent's perceptual span and character setting to achieve a significantly enhanced trading performance. Collectively, \textsc{FinMem} presents a cutting-edge LLM agent framework for automated trading, boosting cumulative investment returns.

FinMe: A Performance-Enhanced Large Language Model Trading Agent with Layered Memory and Character Design

Recent advancements in Large Language Models (LLMs) have exhibited notable efficacy in question-answering (QA) tasks across diverse domains. Their prowess in integrating extensive web knowledge has fueled interest in developing LLM autonomous agents. While LLMs are efficient in decoding human instructions and deriving solutions by holistically processing historical inputs, transitioning to purpose-driven agents requires a supplementary rational architecture to process multi-source information, establish reasoning chains, and prioritize critical tasks. Addressing this, we introduce \textsc{FinMe}, a novel LLM-based agent framework devised for financial decision-making, encompassing three core modules: Profiling, to outline the agent's characteristics; Memory, with layered processing, to aid the agent in assimilating realistic hierarchical financial data; and Decision-making, to convert insights gained from memories into investment decisions. Notably, \textsc{FinMe}'s memory module aligns closely with the cognitive structure of human traders, offering robust interpretability and real-time tuning. Its adjustable cognitive span allows for the retention of critical information beyond human perceptual limits, thereby enhancing trading outcomes. This framework enables the agent to self-evolve its professional knowledge, react agilely to new investment cues, and continuously refine trading decisions in the volatile financial environment. We first compare \textsc{FinMe} with various algorithmic agents on a scalable real-world financial dataset, underscoring its leading trading performance in stocks and funds. We then fine-tuned the agent's perceptual spans to achieve a significant trading performance. Collectively, \textsc{FinMe} presents a cutting-edge LLM agent framework for automated trading, boosting cumulative investment returns.

Stand for Something or Fall for Everything: Predict Misinformation Spread with Stance-Aware Graph Neural Networks

Although pervasive spread of misinformation on social media platforms has become a pressing challenge, existing platform interventions have shown limited success in curbing its dissemination. In this study, we propose a stance-aware graph neural network (stance-aware GNN) that leverages users' stances to proactively predict misinformation spread. As different user stances can form unique echo chambers, we customize four information passing paths in stance-aware GNN, while the trainable attention weights provide explainability by highlighting each structure's importance. Evaluated on a real-world dataset, stance-aware GNN outperforms benchmarks by 32.65% and exceeds advanced GNNs without user stance by over 4.69%. Furthermore, the attention weights indicate that users' opposition stances have a higher impact on their neighbors' behaviors than supportive ones, which function as social correction to halt misinformation propagation. Overall, our study provides an effective predictive model for platforms to combat misinformation, and highlights the impact of user stances in the misinformation propagation.

Instant Photorealistic Style Transfer: A Lightweight and Adaptive Approach

In this paper, we propose an Instant Photorealistic Style Transfer (IPST) approach, designed to achieve instant photorealistic style transfer on super-resolution inputs without the need for pre-training on pair-wise datasets or imposing extra constraints. Our method utilizes a lightweight StyleNet to enable style transfer from a style image to a content image while preserving non-color information. To further enhance the style transfer process, we introduce an instance-adaptive optimization to prioritize the photorealism of outputs and accelerate the convergence of the style network, leading to a rapid training completion within seconds. Moreover, IPST is well-suited for multi-frame style transfer tasks, as it retains temporal and multi-view consistency of the multi-frame inputs such as video and Neural Radiance Field (NeRF). Experimental results demonstrate that IPST requires less GPU memory usage, offers faster multi-frame transfer speed, and generates photorealistic outputs, making it a promising solution for various photorealistic transfer applications.

MURPHY: Relations Matter in Surgical Workflow Analysis

Autonomous robotic surgery has advanced significantly based on analysis of visual and temporal cues in surgical workflow, but relational cues from domain knowledge remain under investigation. Complex relations in surgical annotations can be divided into intra- and inter-relations, both valuable to autonomous systems to comprehend surgical workflows. Intra- and inter-relations describe the relevance of various categories within a particular annotation type and the relevance of different annotation types, respectively. This paper aims to systematically investigate the importance of relational cues in surgery. First, we contribute the RLLS12M dataset, a large-scale collection of robotic left lateral sectionectomy (RLLS), by curating 50 videos of 50 patients operated by 5 surgeons and annotating a hierarchical workflow, which consists of 3 inter- and 6 intra-relations, 6 steps, 15 tasks, and 38 activities represented as the triplet of 11 instruments, 8 actions, and 16 objects, totaling 2,113,510 video frames and 12,681,060 annotation entities. Correspondingly, we propose a multi-relation purification hybrid network (MURPHY), which aptly incorporates novel relation modules to augment the feature representation by purifying relational features using the intra- and inter-relations embodied in annotations. The intra-relation module leverages a R-GCN to implant visual features in different graph relations, which are aggregated using a targeted relation purification with affinity information measuring label consistency and feature similarity. The inter-relation module is motivated by attention mechanisms to regularize the influence of relational features based on the hierarchy of annotation types from the domain knowledge. Extensive experimental results on the curated RLLS dataset confirm the effectiveness of our approach, demonstrating that relations matter in surgical workflow analysis.

Improving Global Forest Mapping by Semi-automatic Sample Labeling with Deep Learning on Google Earth Images

Global forest cover is critical to the provision of certain ecosystem services. With the advent of the google earth engine cloud platform, fine resolution global land cover mapping task could be accomplished in a matter of days instead of years. The amount of global forest cover (GFC) products has been steadily increasing in the last decades. However, it's hard for users to select suitable one due to great differences between these products, and the accuracy of these GFC products has not been verified on global scale. To provide guidelines for users and producers, it is urgent to produce a validation sample set at the global level. However, this labeling task is time and labor consuming, which has been the main obstacle to the progress of global land cover mapping. In this research, a labor-efficient semi-automatic framework is introduced to build a biggest ever Forest Sample Set (FSS) contained 395280 scattered samples categorized as forest, shrubland, grassland, impervious surface, etc. On the other hand, to provide guidelines for the users, we comprehensively validated the local and global mapping accuracy of all existing 30m GFC products, and analyzed and mapped the agreement of them. Moreover, to provide guidelines for the producers, optimal sampling strategy was proposed to improve the global forest classification. Furthermore, a new global forest cover named GlobeForest2020 has been generated, which proved to improve the previous highest state-of-the-art accuracies (obtained by Gong et al., 2017) by 2.77% in uncertain grids and by 1.11% in certain grids.

Stochastic Top-k ListNet

ListNet is a well-known listwise learning to rank model and has gained much attention in recent years. A particular problem of ListNet, however, is the high computation complexity in model training, mainly due to the large number of object permutations involved in computing the gradients. This paper proposes a stochastic ListNet approach which computes the gradient within a bounded permutation subset. It significantly reduces the computation complexity of model training and allows extension to Top-k models, which is impossible with the conventional implementation based on full-set permutations. Meanwhile, the new approach utilizes partial ranking information of human labels, which helps improve model quality. Our experiments demonstrated that the stochastic ListNet method indeed leads to better ranking performance and speeds up the model training remarkably.

Learning from LDA using Deep Neural Networks

Latent Dirichlet Allocation (LDA) is a three-level hierarchical Bayesian model for topic inference. In spite of its great success, inferring the latent topic distribution with LDA is time-consuming. Motivated by the transfer learning approach proposed by~\newcite{hinton2015distilling}, we present a novel method that uses LDA to supervise the training of a deep neural network (DNN), so that the DNN can approximate the costly LDA inference with less computation. Our experiments on a document classification task show that a simple DNN can learn the LDA behavior pretty well, while the inference is speeded up tens or hundreds of times.

Bayesian Analysis for miRNA and mRNA Interactions Using Expression Data

MicroRNAs (miRNAs) are small RNA molecules composed of 19-22 nt, which play important regulatory roles in post-transcriptional gene regulation by inhibiting the translation of the mRNA into proteins or otherwise cleaving the target mRNA. Inferring miRNA targets provides useful information for understanding the roles of miRNA in biological processes that are potentially involved in complex diseases. Statistical methodologies for point estimation, such as the Least Absolute Shrinkage and Selection Operator (LASSO) algorithm, have been proposed to identify the interactions of miRNA and mRNA based on sequence and expression data. In this paper, we propose using the Bayesian LASSO (BLASSO) and the non-negative Bayesian LASSO (nBLASSO) to analyse the interactions between miRNA and mRNA using expression data. The proposed Bayesian methods explore the posterior distributions for those parameters required to model the miRNA-mRNA interactions. These approaches can be used to observe the inferred effects of the miRNAs on the targets by plotting the posterior distributions of those parameters. For comparison purposes, the Least Squares Regression (LSR), Ridge Regression (RR), LASSO, non-negative LASSO (nLASSO), and the proposed Bayesian approaches were applied to four public datasets. We concluded that nLASSO and nBLASSO perform best in terms of sensitivity and specificity. Compared to the point estimate algorithms, which only provide single estimates for those parameters, the Bayesian methods are more meaningful and provide credible intervals, which take into account the uncertainty of the inferred interactions of the miRNA and mRNA. Furthermore, Bayesian methods naturally provide statistical significance to select convincing inferred interactions, while point estimate algorithms require a manually chosen threshold, which is less meaningful, to choose the possible interactions.