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Prototypical few-shot segmentation for cross-institution male pelvic structures with spatial registration


Sep 13, 2022
Yiwen Li, Yunguan Fu, Iani Gayo, Qianye Yang, Zhe Min, Shaheer Saeed, Wen Yan, Yipei Wang, J. Alison Noble, Mark Emberton, Matthew J. Clarkson, Henkjan Huisman, Dean Barratt, Victor Adrian Prisacariu, Yipeng Hu


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Few-shot image segmentation for cross-institution male pelvic organs using registration-assisted prototypical learning


Jan 17, 2022
Yiwen Li, Yunguan Fu, Qianye Yang, Zhe Min, Wen Yan, Henkjan Huisman, Dean Barratt, Victor Adrian Prisacariu, Yipeng Hu

* To appear in the proceedings of the IEEE International Symposium on Biomedical Imaging (ISBI) 2022 

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Report-Guided Automatic Lesion Annotation for Deep Learning-Based Prostate Cancer Detection in bpMRI


Dec 09, 2021
Joeran S. Bosma, Anindo Saha, Matin Hosseinzadeh, Ilse Slootweg, Maarten de Rooij, Henkjan Huisman


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Fully Automatic Deep Learning Framework for Pancreatic Ductal Adenocarcinoma Detection on Computed Tomography


Dec 02, 2021
Natália Alves, Megan Schuurmans, Geke Litjens, Joeran S. Bosma, John Hermans, Henkjan Huisman


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Anatomical and Diagnostic Bayesian Segmentation in Prostate MRI $-$Should Different Clinical Objectives Mandate Different Loss Functions?


Oct 25, 2021
Anindo Saha, Joeran Bosma, Jasper Linmans, Matin Hosseinzadeh, Henkjan Huisman

* Accepted to Medical Imaging Meets NeurIPS Workshop of the 35th Conference on Neural Information Processing Systems (NeurIPS 2021) 

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Cine-MRI detection of abdominal adhesions with spatio-temporal deep learning


Jun 15, 2021
Bram de Wilde, Richard P. G. ten Broek, Henkjan Huisman

* Accepted at MIDL 2021 as short paper 

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The Medical Segmentation Decathlon


Jun 10, 2021
Michela Antonelli, Annika Reinke, Spyridon Bakas, Keyvan Farahani, AnnetteKopp-Schneider, Bennett A. Landman, Geert Litjens, Bjoern Menze, Olaf Ronneberger, Ronald M. Summers, Bram van Ginneken, Michel Bilello, Patrick Bilic, Patrick F. Christ, Richard K. G. Do, Marc J. Gollub, Stephan H. Heckers, Henkjan Huisman, William R. Jarnagin, Maureen K. McHugo, Sandy Napel, Jennifer S. Goli Pernicka, Kawal Rhode, Catalina Tobon-Gomez, Eugene Vorontsov, Henkjan Huisman, James A. Meakin, Sebastien Ourselin, Manuel Wiesenfarth, Pablo Arbelaez, Byeonguk Bae, Sihong Chen, Laura Daza, Jianjiang Feng, Baochun He, Fabian Isensee, Yuanfeng Ji, Fucang Jia, Namkug Kim, Ildoo Kim, Dorit Merhof, Akshay Pai, Beomhee Park, Mathias Perslev, Ramin Rezaiifar, Oliver Rippel, Ignacio Sarasua, Wei Shen, Jaemin Son, Christian Wachinger, Liansheng Wang, Yan Wang, Yingda Xia, Daguang Xu, Zhanwei Xu, Yefeng Zheng, Amber L. Simpson, Lena Maier-Hein, M. Jorge Cardoso


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End-to-end Prostate Cancer Detection in bpMRI via 3D CNNs: Effect of Attention Mechanisms, Clinical Priori and Decoupled False Positive Reduction


Jan 28, 2021
Anindo Saha, Matin Hosseinzadeh, Henkjan Huisman

* Under Review at MedIA: Medical Image Analysis. This manuscript incorporates and expands upon our 2020 Medical Imaging Meets NeurIPS Workshop paper (arXiv:2011.00263) 

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