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Picture for Bruce Fischl

Bruce Fischl

for the Alzheimer's Disease Neuroimaging Initiative

SynthSeg: Domain Randomisation for Segmentation of Brain MRI Scans of any Contrast and Resolution

Jul 20, 2021
Benjamin Billot, Douglas N. Greve, Oula Puonti, Axel Thielscher, Koen Van Leemput, Bruce Fischl, Adrian V. Dalca, Juan Eugenio Iglesias

* 20 pages, 11 figures, currently under review 

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Unsupervised learning of MRI tissue properties using MRI physics models

Jul 06, 2021
Divya Varadarajan, Katherine L. Bouman, Andre van der Kouwe, Bruce Fischl, Adrian V. Dalca

* 11 Pages, 9 figures 

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Robust joint registration of multiple stains and MRI for multimodal 3D histology reconstruction: Application to the Allen human brain atlas

May 04, 2021
Adrià Casamitjana, Marco Lorenzi, Sebastiano Ferraris, Loc Peter, Marc Modat, Allison Stevens, Bruce Fischl, Tom Vercauteren, Juan Eugenio Iglesias

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HyperMorph: Amortized Hyperparameter Learning for Image Registration

Jan 04, 2021
Andrew Hoopes, Malte Hoffmann, Bruce Fischl, John Guttag, Adrian V. Dalca

* Keywords: Deformable Image Registration, Hyperparameter Tuning, Deep Learning, and Amortized Learning 

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Joint super-resolution and synthesis of 1 mm isotropic MP-RAGE volumes from clinical MRI exams with scans of different orientation, resolution and contrast

Dec 24, 2020
Juan Eugenio Iglesias, Benjamin Billot, Yael Balbastre, Azadeh Tabari, John Conklin, Daniel C. Alexander, Polina Golland, Brian L. Edlow, Bruce Fischl

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3D Reconstruction and Segmentation of Dissection Photographs for MRI-free Neuropathology

Sep 11, 2020
Henry Tregidgo, Adria Casamitjana, Caitlin Latimer, Mitchell Kilgore, Eleanor Robinson, Emily Blackburn, Koen Van Leemput, Bruce Fischl, Adrian Dalca, Christine Mac Donald, Dirk Keene, Juan Eugenio Iglesias

* Accepted at MICCAI 2020 

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Learning Multi-Modal Image Registration without Real Data

Apr 21, 2020
Malte Hoffmann, Benjamin Billot, Juan Eugenio Iglesias, Bruce Fischl, Adrian V. Dalca

* 12 pages, 8 figures, deformable image registration, modality independence, training without data 

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Cortical surface registration using unsupervised learning

Apr 09, 2020
Jieyu Cheng, Adrian Dalca, Bruce Fischl, Lilla Zollei

* cortical surface registration, deep network, unsupervised learning, registration, deep learning, cortical, spherical, invertible 

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A Learning Strategy for Contrast-agnostic MRI Segmentation

Mar 04, 2020
Benjamin Billot, Douglas Greve, Koen Van Leemput, Bruce Fischl, Juan Eugenio Iglesias, Adrian V. Dalca

* 18 pages, 5 figures 

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FastSurfer -- A fast and accurate deep learning based neuroimaging pipeline

Oct 09, 2019
Leonie Henschel, Sailesh Conjeti, Santiago Estrada, Kersten Diers, Bruce Fischl, Martin Reuter

* Submitted to NeuroImage 

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Fast Infant MRI Skullstripping with Multiview 2D Convolutional Neural Networks

Apr 27, 2019
Amod Jog, P. Ellen Grant, Joseph L. Jacobson, Andre van der Kouwe, Ernesta M. Meintjes, Bruce Fischl, Lilla Zöllei

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Unsupervised deep learning for Bayesian brain MRI segmentation

Apr 25, 2019
Adrian V. Dalca, Evan Yu, Polina Golland, Bruce Fischl, Mert R. Sabuncu, Juan Eugenio Iglesias

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PSACNN: Pulse Sequence Adaptive Fast Whole Brain Segmentation

Jan 21, 2019
Amod Jog, Andrew Hoopes, Douglas N. Greves, Koen Van Leemput, Bruce Fischl

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Pulse Sequence Resilient Fast Brain Segmentation

Jul 30, 2018
Amod Jog, Bruce Fischl

* Accepted at MICCAI 2018 

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A probabilistic atlas of the human thalamic nuclei combining ex vivo MRI and histology

Jun 22, 2018
Juan Eugenio Iglesias, Ricardo Insausti, Garikoitz Lerma-Usabiaga, Martina Bocchetta, Koen Van Leemput, Douglas N Greve, Andre van der Kouwe, Bruce Fischl, Cesar Caballero-Gaudes, Pedro M Paz-Alonso

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Joint registration and synthesis using a probabilistic model for alignment of MRI and histological sections

Jan 16, 2018
Juan Eugenio Iglesias, Marc Modat, Loic Peter, Allison Stevens, Roberto Annunziata, Tom Vercauteren, Ed Lein, Bruce Fischl, Sebastien Ourselin

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