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Learning to Predict with Supporting Evidence: Applications to Clinical Risk Prediction


Mar 04, 2021
Aniruddh Raghu, John Guttag, Katherine Young, Eugene Pomerantsev, Adrian V. Dalca, Collin M. Stultz

* ACM Conference on Health, Learning, and Inference 2021 

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HyperMorph: Amortized Hyperparameter Learning for Image Registration


Jan 04, 2021
Andrew Hoopes, Malte Hoffmann, Bruce Fischl, John Guttag, Adrian V. Dalca

* Keywords: Deformable Image Registration, Hyperparameter Tuning, Deep Learning, and Amortized Learning 

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When and Why Test-Time Augmentation Works


Nov 23, 2020
Divya Shanmugam, Davis Blalock, Guha Balakrishnan, John Guttag


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Unsupervised Domain Adaptation in the Absence of Source Data


Jul 20, 2020
Roshni Sahoo, Divya Shanmugam, John Guttag


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Anatomical Predictions using Subject-Specific Medical Data


May 29, 2020
Marianne Rakic, John Guttag, Adrian V. Dalca

* Accepted as a short paper to MIDL2020. Keywords: Medical Imaging, Multi-Modal, Prediction 

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What is the State of Neural Network Pruning?


Mar 06, 2020
Davis Blalock, Jose Javier Gonzalez Ortiz, Jonathan Frankle, John Guttag

* Published in Proceedings of Machine Learning and Systems 2020 (MLSys 2020) 

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Image segmentation of liver stage malaria infection with spatial uncertainty sampling


Nov 30, 2019
Ava P. Soleimany, Harini Suresh, Jose Javier Gonzalez Ortiz, Divya Shanmugam, Nil Gural, John Guttag, Sangeeta N. Bhatia


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Estimation of Utility-Maximizing Bounds on Potential Outcomes


Oct 10, 2019
Maggie Makar, Fredrik D. Johansson, John Guttag, David Sontag


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Learning Conditional Deformable Templates with Convolutional Networks


Aug 07, 2019
Adrian V. Dalca, Marianne Rakic, John Guttag, Mert R. Sabuncu

* Keywords: deformable templates, conditional atlases, diffeomorphic image registration, probabilistic models, neuroimaging 

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Unsupervised Learning of Probabilistic Diffeomorphic Registration for Images and Surfaces


Mar 08, 2019
Adrian V. Dalca, Guha Balakrishnan, John Guttag, Mert R. Sabuncu

* Under Review at MedIA: Medical Image Analysis (MICCAI2018 Special Issue). This manuscript expands on the MICCAI 2018 paper (arXiv:1805.04605) by introducing an extension to anatomical surface registration, new experiments, and an analysis of diffeomorphic implementations. Code available at http://voxelmorph.csail.mit.edu 

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Unsupervised Data Imputation via Variational Inference of Deep Subspaces


Mar 08, 2019
Adrian V. Dalca, John Guttag, Mert R. Sabuncu


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Anatomical Priors in Convolutional Networks for Unsupervised Biomedical Segmentation


Mar 07, 2019
Adrian V. Dalca, John Guttag, Mert R. Sabuncu

* Presented at CVPR 2018. IEEE CVPR proceedings pp. 9290-9299 

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Fast Learning-based Registration of Sparse Clinical Images


Dec 17, 2018
Kathleen M. Lewis, Guha Balakrishnan, Natalia S. Rost, John Guttag, Adrian V. Dalca

* Paper presented at machine learning for healthcare (NeurIPS ML4H) 2018 

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Multiple Instance Learning for ECG Risk Stratification


Dec 02, 2018
Divya Shanmugam, Davis Blalock, Jen G. Gong, John Guttag

* Machine Learning for Health (ML4H) Workshop at NeurIPS 2018 arXiv:cs/0101200 

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Unsupervised Learning for Fast Probabilistic Diffeomorphic Registration


Sep 14, 2018
Adrian V. Dalca, Guha Balakrishnan, John Guttag, Mert R. Sabuncu

* LNCS 11070, pp 729-738, Springer. 2018 
* MICCAI 2018 (Oral Presentation). Proceedings: LNCS 11070, pp 729-738 

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VoxelMorph: A Learning Framework for Deformable Medical Image Registration


Sep 14, 2018
Guha Balakrishnan, Amy Zhao, Mert R. Sabuncu, John Guttag, Adrian V. Dalca

* Submitted to IEEE TMI. This manuscript expands on the CVPR 2018 paper (arXiv:1802.02604) by presenting an auxiliary learning model, an amortized optimization analysis, and more extensive model evaluations 

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Learning Tasks for Multitask Learning: Heterogenous Patient Populations in the ICU


Jun 07, 2018
Harini Suresh, Jen J. Gong, John Guttag

* KDD 2018 

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An Unsupervised Learning Model for Deformable Medical Image Registration


Apr 20, 2018
Guha Balakrishnan, Amy Zhao, Mert R. Sabuncu, John Guttag, Adrian V. Dalca

* 9 pages, in CVPR 2018 

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Synthesizing Images of Humans in Unseen Poses


Apr 20, 2018
Guha Balakrishnan, Amy Zhao, Adrian V. Dalca, Fredo Durand, John Guttag

* CVPR 2018 

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A Video-Based Method for Objectively Rating Ataxia


Sep 07, 2017
Ronnachai Jaroensri, Amy Zhao, Guha Balakrishnan, Derek Lo, Jeremy Schmahmann, John Guttag, Fredo Durand

* MLHC 2017 

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