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Augmentation based unsupervised domain adaptation


Feb 23, 2022
Mauricio Orbes-Arteaga , Thomas Varsavsky , Lauge Sorensen , Mads Nielsen , Akshay Pai , Sebastien Ourselin , Marc Modat , M Jorge Cardoso


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The Medical Segmentation Decathlon


Jun 10, 2021
Michela Antonelli , Annika Reinke , Spyridon Bakas , Keyvan Farahani , AnnetteKopp-Schneider , Bennett A. Landman , Geert Litjens , Bjoern Menze , Olaf Ronneberger , Ronald M. Summers , Bram van Ginneken , Michel Bilello , Patrick Bilic , Patrick F. Christ , Richard K. G. Do , Marc J. Gollub , Stephan H. Heckers , Henkjan Huisman , William R. Jarnagin , Maureen K. McHugo , Sandy Napel , Jennifer S. Goli Pernicka , Kawal Rhode , Catalina Tobon-Gomez , Eugene Vorontsov , Henkjan Huisman , James A. Meakin , Sebastien Ourselin , Manuel Wiesenfarth , Pablo Arbelaez , Byeonguk Bae , Sihong Chen , Laura Daza , Jianjiang Feng , Baochun He , Fabian Isensee , Yuanfeng Ji , Fucang Jia , Namkug Kim , Ildoo Kim , Dorit Merhof , Akshay Pai , Beomhee Park , Mathias Perslev , Ramin Rezaiifar , Oliver Rippel , Ignacio Sarasua , Wei Shen , Jaemin Son , Christian Wachinger , Liansheng Wang , Yan Wang , Yingda Xia , Daguang Xu , Zhanwei Xu , Yefeng Zheng , Amber L. Simpson , Lena Maier-Hein , M. Jorge Cardoso


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Uncertainty quantification in medical image segmentation with Normalizing Flows


Jun 04, 2020
Raghavendra Selvan , Frederik Faye , Jon Middleton , Akshay Pai

* 12 pages 

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The International Workshop on Osteoarthritis Imaging Knee MRI Segmentation Challenge: A Multi-Institute Evaluation and Analysis Framework on a Standardized Dataset


May 26, 2020
Arjun D. Desai , Francesco Caliva , Claudia Iriondo , Naji Khosravan , Aliasghar Mortazi , Sachin Jambawalikar , Drew Torigian , Jutta Ellermann , Mehmet Akcakaya , Ulas Bagci , Radhika Tibrewala , Io Flament , Matthew O`Brien , Sharmila Majumdar , Mathias Perslev , Akshay Pai , Christian Igel , Erik B. Dam , Sibaji Gaj , Mingrui Yang , Kunio Nakamura , Xiaojuan Li , Cem M. Deniz , Vladimir Juras , Ravinder Regatte , Garry E. Gold , Brian A. Hargreaves , Valentina Pedoia , Akshay S. Chaudhari

* Submitted to Radiology: Artificial Intelligence; Fixed typos 

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Lung Segmentation from Chest X-rays using Variational Data Imputation


May 20, 2020
Raghavendra Selvan , Erik B. Dam , Sofus Rischel , Kaining Sheng , Mads Nielsen , Akshay Pai

* Source code, training data and the trained models are available here: https://github.com/raghavian/lungVAE/ 

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On the Initialization of Long Short-Term Memory Networks


Dec 22, 2019
Mostafa Mehdipour Ghazi , Mads Nielsen , Akshay Pai , Marc Modat , M. Jorge Cardoso , Sebastien Ourselin , Lauge Sorensen


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One Network to Segment Them All: A General, Lightweight System for Accurate 3D Medical Image Segmentation


Nov 05, 2019
Mathias Perslev , Erik Bjørnager Dam , Akshay Pai , Christian Igel

* Medical Image Computing and Computer Assisted Intervention (MICCAI), LNCS 11765, pp. 30-38, Springer, 2019 

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Multi-Domain Adaptation in Brain MRI through Paired Consistency and Adversarial Learning


Sep 17, 2019
Mauricio Orbes-Arteaga , Thomas Varsavsky , Carole H. Sudre , Zach Eaton-Rosen , Lewis J. Haddow , Lauge Sørensen , Mads Nielsen , Akshay Pai , Sébastien Ourselin , Marc Modat , Parashkev Nachev , M. Jorge Cardoso

* Accepted at 1st International Workshop on Domain Adaptation and Representation Transfer held at MICCAI 2019 

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