Ill-Conditioning in Dictionary-Based Dynamic-Equation Learning: A Systems Biology Case Study

Data-driven discovery of governing equations from time-series data provides a powerful framework for understanding complex biological systems. Library-based approaches that use sparse regression over candidate functions have shown considerable promise, but they face a critical challenge when candidate functions become strongly correlated: numerical ill-conditioning. Poor or restricted sampling, together with particular choices of candidate libraries, can produce strong multicollinearity and numerical instability. In such cases, measurement noise may lead to widely different recovered models, obscuring the true underlying dynamics and hindering accurate system identification. Although sparse regularization promotes parsimonious solutions and can partially mitigate conditioning issues, strong correlations may persist, regularization may bias the recovered models, and the regression problem may remain highly sensitive to small perturbations in the data. We present a systematic analysis of how ill-conditioning affects sparse identification of biological dynamics using benchmark models from systems biology. We show that combinations involving as few as two or three terms can already exhibit strong multicollinearity and extremely large condition numbers. We further show that orthogonal polynomial bases do not consistently resolve ill-conditioning and can perform worse than monomial libraries when the data distribution deviates from the weight function associated with the orthogonal basis. Finally, we demonstrate that when data are sampled from distributions aligned with the appropriate weight functions corresponding to the orthogonal basis, numerical conditioning improves, and orthogonal polynomial bases can yield improved model recovery accuracy across two baseline models.

ConTSG-Bench: A Unified Benchmark for Conditional Time Series Generation

Conditional time series generation plays a critical role in addressing data scarcity and enabling causal analysis in real-world applications. Despite its increasing importance, the field lacks a standardized and systematic benchmarking framework for evaluating generative models across diverse conditions. To address this gap, we introduce the Conditional Time Series Generation Benchmark (ConTSG-Bench). ConTSG-Bench comprises a large-scale, well-aligned dataset spanning diverse conditioning modalities and levels of semantic abstraction, first enabling systematic evaluation of representative generation methods across these dimensions with a comprehensive suite of metrics for generation fidelity and condition adherence. Both the quantitative benchmarking and in-depth analyses of conditional generation behaviors have revealed the traits and limitations of the current approaches, highlighting critical challenges and promising research directions, particularly with respect to precise structural controllability and downstream task utility under complex conditions.

Navigating Time's Possibilities: Plausible Counterfactual Explanations for Multivariate Time-Series Forecast through Genetic Algorithms

Counterfactual learning has become promising for understanding and modeling causality in complex and dynamic systems. This paper presents a novel method for counterfactual learning in the context of multivariate time series analysis and forecast. The primary objective is to uncover hidden causal relationships and identify potential interventions to achieve desired outcomes. The proposed methodology integrates genetic algorithms and rigorous causality tests to infer and validate counterfactual dependencies within temporal sequences. More specifically, we employ Granger causality to enhance the reliability of identified causal relationships, rigorously assessing their statistical significance. Then, genetic algorithms, in conjunction with quantile regression, are used to exploit these intricate causal relationships to project future scenarios. The synergy between genetic algorithms and causality tests ensures a thorough exploration of the temporal dynamics present in the data, revealing hidden dependencies and enabling the projection of outcomes under hypothetical interventions. We evaluate the performance of our algorithm on real-world data, showcasing its ability to handle complex causal relationships, revealing meaningful counterfactual insights, and allowing for the prediction of outcomes under hypothetical interventions.

GNNs for Time Series Anomaly Detection: An Open-Source Framework and a Critical Evaluation

There is growing interest in applying graph-based methods to Time Series Anomaly Detection (TSAD), particularly Graph Neural Networks (GNNs), as they naturally model dependencies among multivariate signals. GNNs are typically used as backbones in score-based TSAD pipelines, where anomalies are identified through reconstruction or prediction errors followed by thresholding. However, and despite promising results, the field still lacks standardized frameworks for evaluation and suffers from persistent issues with metric design and interpretation. We thus present an open-source framework for TSAD using GNNs, designed to support reproducible experimentation across datasets, graph structures, and evaluation strategies. Built with flexibility and extensibility in mind, the framework facilitates systematic comparisons between TSAD models and enables in-depth analysis of performance and interpretability. Using this tool, we evaluate several GNN-based architectures alongside baseline models across two real-world datasets with contrasting structural characteristics. Our results show that GNNs not only improve detection performance but also offer significant gains in interpretability, an especially valuable feature for practical diagnosis. We also find that attention-based GNNs offer robustness when graph structure is uncertain or inferred. In addition, we reflect on common evaluation practices in TSAD, showing how certain metrics and thresholding strategies can obscure meaningful comparisons. Overall, this work contributes both practical tools and critical insights to advance the development and evaluation of graph-based TSAD systems.

Hybrid Quantum Temporal Convolutional Networks

Quantum machine learning models for sequential data face scalability challenges with complex multivariate signals. We introduce the Hybrid Quantum Temporal Convolutional Network (HQTCN), which combines classical temporal windowing with a quantum convolutional neural network core. By applying a shared quantum circuit across temporal windows, HQTCN captures long-range dependencies while achieving significant parameter reduction. Evaluated on synthetic NARMA sequences and high-dimensional EEG time-series, HQTCN performs competitively with classical baselines on univariate data and outperforms all baselines on multivariate tasks. The model demonstrates particular strength under data-limited conditions, maintaining high performance with substantially fewer parameters than conventional approaches. These results establish HQTCN as a parameter-efficient approach for multivariate time-series analysis.

KairosVL: Orchestrating Time Series and Semantics for Unified Reasoning

Driven by the increasingly complex and decision-oriented demands of time series analysis, we introduce the Semantic-Conditional Time Series Reasoning task, which extends conventional time series analysis beyond purely numerical modeling to incorporate contextual and semantic understanding. To further enhance the mode's reasoning capabilities on complex time series problems, we propose a two-round reinforcement learning framework: the first round strengthens the mode's perception of fundamental temporal primitives, while the second focuses on semantic-conditioned reasoning. The resulting model, KairosVL, achieves competitive performance across both synthetic and real-world tasks. Extensive experiments and ablation studies demonstrate that our framework not only boosts performance but also preserves intrinsic reasoning ability and significantly improves generalization to unseen scenarios. To summarize, our work highlights the potential of combining semantic reasoning with temporal modeling and provides a practical framework for real-world time series intelligence, which is in urgent demand.

Distributed Dynamic Invariant Causal Prediction in Environmental Time Series

The extraction of invariant causal relationships from time series data with environmental attributes is critical for robust decision-making in domains such as climate science and environmental monitoring. However, existing methods either emphasize dynamic causal analysis without leveraging environmental contexts or focus on static invariant causal inference, leaving a gap in distributed temporal settings. In this paper, we propose Distributed Dynamic Invariant Causal Prediction in Time-series (DisDy-ICPT), a novel framework that learns dynamic causal relationships over time while mitigating spatial confounding variables without requiring data communication. We theoretically prove that DisDy-ICPT recovers stable causal predictors within a bounded number of communication rounds under standard sampling assumptions. Empirical evaluations on synthetic benchmarks and environment-segmented real-world datasets show that DisDy-ICPT achieves superior predictive stability and accuracy compared to baseline methods A and B. Our approach offers promising applications in carbon monitoring and weather forecasting. Future work will extend DisDy-ICPT to online learning scenarios.

Cross-Task Benchmarking of CNN Architectures

This project provides a comparative study of dynamic convolutional neural networks (CNNs) for various tasks, including image classification, segmentation, and time series analysis. Based on the ResNet-18 architecture, we compare five variants of CNNs: the vanilla CNN, the hard attention-based CNN, the soft attention-based CNN with local (pixel-wise) and global (image-wise) feature attention, and the omni-directional CNN (ODConv). Experiments on Tiny ImageNet, Pascal VOC, and the UCR Time Series Classification Archive illustrate that attention mechanisms and dynamic convolution methods consistently exceed conventional CNNs in accuracy, efficiency, and computational performance. ODConv was especially effective on morphologically complex images by being able to dynamically adjust to varying spatial patterns. Dynamic CNNs enhanced feature representation and cross-task generalization through adaptive kernel modulation. This project provides perspectives on advanced CNN design architecture for multiplexed data modalities and indicates promising directions in neural network engineering.

LLM-MLFFN: Multi-Level Autonomous Driving Behavior Feature Fusion via Large Language Model

Accurate classification of autonomous vehicle (AV) driving behaviors is critical for safety validation, performance diagnosis, and traffic integration analysis. However, existing approaches primarily rely on numerical time-series modeling and often lack semantic abstraction, limiting interpretability and robustness in complex traffic environments. This paper presents LLM-MLFFN, a novel large language model (LLM)-enhanced multi-level feature fusion network designed to address the complexities of multi-dimensional driving data. The proposed LLM-MLFFN framework integrates priors from largescale pre-trained models and employs a multi-level approach to enhance classification accuracy. LLM-MLFFN comprises three core components: (1) a multi-level feature extraction module that extracts statistical, behavioral, and dynamic features to capture the quantitative aspects of driving behaviors; (2) a semantic description module that leverages LLMs to transform raw data into high-level semantic features; and (3) a dual-channel multi-level feature fusion network that combines numerical and semantic features using weighted attention mechanisms to improve robustness and prediction accuracy. Evaluation on the Waymo open trajectory dataset demonstrates the superior performance of the proposed LLM-MLFFN, achieving a classification accuracy of over 94%, surpassing existing machine learning models. Ablation studies further validate the critical contributions of multi-level fusion, feature extraction strategies, and LLM-derived semantic reasoning. These results suggest that integrating structured feature modeling with language-driven semantic abstraction provides a principled and interpretable pathway for robust autonomous driving behavior classification.

LaSTR: Language-Driven Time-Series Segment Retrieval

Effectively searching time-series data is essential for system analysis, but existing methods often require expert-designed similarity criteria or rely on global, series-level descriptions. We study language-driven segment retrieval: given a natural language query, the goal is to retrieve relevant local segments from large time-series repositories. We build large-scale segment--caption training data by applying TV2-based segmentation to LOTSA windows and generating segment descriptions with GPT-5.2, and then train a Conformer-based contrastive retriever in a shared text--time-series embedding space. On a held-out test split, we evaluate single-positive retrieval together with caption-side consistency (SBERT and VLM-as-a-judge) under multiple candidate pool sizes. Across all settings, LaSTR outperforms random and CLIP baselines, yielding improved ranking quality and stronger semantic agreement between retrieved segments and query intent.