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Yong Fan

from the iSTAGING consortium, for the ADNI

Multidimensional representations in late-life depression: convergence in neuroimaging, cognition, clinical symptomatology and genetics


Oct 25, 2021
Junhao Wen, Cynthia H. Y. Fu, Duygu Tosun, Yogasudha Veturi, Zhijian Yang, Ahmed Abdulkadir, Elizabeth Mamourian, Dhivya Srinivasan, Jingxuan Bao, Guray Erus, Haochang Shou, Mohamad Habes, Jimit Doshi, Erdem Varol, Scott R Mackin, Aristeidis Sotiras, Yong Fan, Andrew J. Saykin, Yvette I. Sheline, Li Shen, Marylyn D. Ritchie, David A. Wolk, Marilyn Albert, Susan M. Resnick, Christos Davatzikos


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Disentangling Alzheimer's disease neurodegeneration from typical brain aging using machine learning


Sep 08, 2021
Gyujoon Hwang, Ahmed Abdulkadir, Guray Erus, Mohamad Habes, Raymond Pomponio, Haochang Shou, Jimit Doshi, Elizabeth Mamourian, Tanweer Rashid, Murat Bilgel, Yong Fan, Aristeidis Sotiras, Dhivya Srinivasan, John C. Morris, Daniel Marcus, Marilyn S. Albert, Nick R. Bryan, Susan M. Resnick, Ilya M. Nasrallah, Christos Davatzikos, David A. Wolk

* 4 figures, 3 tables 

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Unsupervised deep learning for individualized brain functional network identification


Dec 11, 2020
Hongming Li, Yong Fan


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Meta-Learning for Natural Language Understanding under Continual Learning Framework


Nov 03, 2020
Jiacheng Wang, Yong Fan, Duo Jiang, Shiqing Li


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Medical Image Harmonization Using Deep Learning Based Canonical Mapping: Toward Robust and Generalizable Learning in Imaging


Oct 11, 2020
Vishnu M. Bashyam, Jimit Doshi, Guray Erus, Dhivya Srinivasan, Ahmed Abdulkadir, Mohamad Habes, Yong Fan, Colin L. Masters, Paul Maruff, Chuanjun Zhuo, Henry Völzke, Sterling C. Johnson, Jurgen Fripp, Nikolaos Koutsouleris, Theodore D. Satterthwaite, Daniel H. Wolf, Raquel E. Gur, Ruben C. Gur, John C. Morris, Marilyn S. Albert, Hans J. Grabe, Susan M. Resnick, R. Nick Bryan, David A. Wolk, Haochang Shou, Ilya M. Nasrallah, Christos Davatzikos


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MDReg-Net: Multi-resolution diffeomorphic image registration using fully convolutional networks with deep self-supervision


Oct 04, 2020
Hongming Li, Yong Fan


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Adaptive convolutional neural networks for k-space data interpolation in fast magnetic resonance imaging


Jun 09, 2020
Tianming Du, Honggang Zhang, Yuemeng Li, Hee Kwon Song, Yong Fan


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ACEnet: Anatomical Context-Encoding Network for Neuroanatomy Segmentation


Feb 13, 2020
Yuemeng Li, Hongming Li, Yong Fan

* Submitted manuscript to TMI 

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Context-endcoding for neural network based skull stripping in magnetic resonance imaging


Oct 23, 2019
Zhen Liu, Borui Xiao, Yuemeng Li, Yong Fan

* draft for skull strip 

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Feature-Fused Context-Encoding Network for Neuroanatomy Segmentation


May 07, 2019
Yuemeng Li, Hangfan Liu, Hongming Li, Yong Fan


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A deep learning model for early prediction of Alzheimer's disease dementia based on hippocampal MRI


Apr 15, 2019
Hongming Li, Mohamad Habes, David A. Wolk, Yong Fan

* Accepted for publication in Alzheimer's & Dementia 

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DeepSEED: 3D Squeeze-and-Excitation Encoder-Decoder ConvNets for Pulmonary Nodule Detection


Apr 06, 2019
Yuemeng Li, Hangfan Liu, Yong Fan

* 9 pages, 3 figures 

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Fully-automatic segmentation of kidneys in clinical ultrasound images using a boundary distance regression network


Jan 05, 2019
Shi Yin, Zhengqiang Zhang, Hongming Li, Qinmu Peng, Xinge You, Susan L. Furth, Gregory E. Tasian, Yong Fan

* 4 pages. arXiv admin note: substantial text overlap with arXiv:1811.04815 

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Early Prediction of Alzheimer's Disease Dementia Based on Baseline Hippocampal MRI and 1-Year Follow-Up Cognitive Measures Using Deep Recurrent Neural Networks


Jan 05, 2019
Hongming Li, Yong Fan

* Accepted by ISBI 2019 

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Deep Convolutional Neural Networks for Imaging Data Based Survival Analysis of Rectal Cancer


Jan 05, 2019
Hongming Li, Pamela Boimel, James Janopaul-Naylor, Haoyu Zhong, Ying Xiao, Edgar Ben-Josef, Yong Fan

* Accepted by ISBI 2019 

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Subsequent Boundary Distance Regression and Pixelwise Classification Networks for Automatic Kidney Segmentation in Ultrasound Images


Nov 12, 2018
Shi Yin, Qinmu Peng, Hongming Li, Zhengqiang Zhang, Xinge You, Susan L. Furth, Gregory E. Tasian, Yong Fan

* 10 pages, 13 figures, journal 

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Brain decoding from functional MRI using long short-term memory recurrent neural networks


Sep 14, 2018
Hongming Li, Yong Fan

* Accepted by MICCAI 2018 

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Identification of temporal transition of functional states using recurrent neural networks from functional MRI


Sep 14, 2018
Hongming Li, Yong Fan

* Accepted by MICCAI 2018 

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Identification of multi-scale hierarchical brain functional networks using deep matrix factorization


Sep 14, 2018
Hongming Li, Xiaofeng Zhu, Yong Fan

* Accepted by MICCAI 2018 

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Brain Age Prediction Based on Resting-State Functional Connectivity Patterns Using Convolutional Neural Networks


Jan 11, 2018
Hongming Li, Theodore D. Satterthwaite, Yong Fan

* Accepted by IEEE International Symposium on Biomedical Imaging 2018 (ISBI'18) 

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Non-Rigid Image Registration Using Self-Supervised Fully Convolutional Networks without Training Data


Jan 11, 2018
Hongming Li, Yong Fan

* Accepted by IEEE International Symposium on Biomedical Imaging 2018 (ISBI'18) 

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Transfer learning for diagnosis of congenital abnormalities of the kidney and urinary tract in children based on Ultrasound imaging data


Dec 31, 2017
Qiang Zheng, Gregory Tasian, Yong Fan

* Accepted paper in IEEE International Symposium on Biomedical Imaging (ISBI), 2018 

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Integrating semi-supervised label propagation and random forests for multi-atlas based hippocampus segmentation


Dec 31, 2017
Qiang Zheng, Yong Fan

* Accepted paper in IEEE International Symposium on Biomedical Imaging (ISBI), 2018 

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A deep learning model integrating FCNNs and CRFs for brain tumor segmentation


Nov 10, 2017
Xiaomei Zhao, Yihong Wu, Guidong Song, Zhenye Li, Yazhuo Zhang, Yong Fan

* This version was accepted in the journal Medical Image Analysis 

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Deep Ordinal Ranking for Multi-Category Diagnosis of Alzheimer's Disease using Hippocampal MRI data


Sep 13, 2017
Hongming Li, Mohamad Habes, Yong Fan


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Non-rigid image registration using fully convolutional networks with deep self-supervision


Sep 04, 2017
Hongming Li, Yong Fan


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A dynamic graph-cuts method with integrated multiple feature maps for segmenting kidneys in ultrasound images


Jun 11, 2017
Qiang Zheng, Steven Warner, Gregory Tasian, Yong Fan


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Direct l_(2,p)-Norm Learning for Feature Selection


Apr 02, 2015
Hanyang Peng, Yong Fan


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