Node representation learning on attributed graphs -- whose nodes are associated with rich attributes (e.g., texts and protein sequences) -- plays a crucial role in many important downstream tasks. To encode the attributes and graph structures simultaneously, recent studies integrate pre-trained models with graph neural networks (GNNs), where pre-trained models serve as node encoders (NEs) to encode the attributes. As jointly training large NEs and GNNs on large-scale graphs suffers from severe scalability issues, many methods propose to train NEs and GNNs separately. Consequently, they do not take feature convolutions in GNNs into consideration in the training phase of NEs, leading to a significant learning bias from that by the joint training. To address this challenge, we propose an efficient label regularization technique, namely Label Deconvolution (LD), to alleviate the learning bias by a novel and highly scalable approximation to the inverse mapping of GNNs. The inverse mapping leads to an objective function that is equivalent to that by the joint training, while it can effectively incorporate GNNs in the training phase of NEs against the learning bias. More importantly, we show that LD converges to the optimal objective function values by thejoint training under mild assumptions. Experiments demonstrate LD significantly outperforms state-of-the-art methods on Open Graph Benchmark datasets.
Inductive link prediction -- where entities during training and inference stages can be different -- has shown great potential for completing evolving knowledge graphs in an entity-independent manner. Many popular methods mainly focus on modeling graph-level features, while the edge-level interactions -- especially the semantic correlations between relations -- have been less explored. However, we notice a desirable property of semantic correlations between relations is that they are inherently edge-level and entity-independent. This implies the great potential of the semantic correlations for the entity-independent inductive link prediction task. Inspired by this observation, we propose a novel subgraph-based method, namely TACO, to model Topology-Aware COrrelations between relations that are highly correlated to their topological structures within subgraphs. Specifically, we prove that semantic correlations between any two relations can be categorized into seven topological patterns, and then proposes Relational Correlation Network (RCN) to learn the importance of each pattern. To further exploit the potential of RCN, we propose Complete Common Neighbor induced subgraph that can effectively preserve complete topological patterns within the subgraph. Extensive experiments demonstrate that TACO effectively unifies the graph-level information and edge-level interactions to jointly perform reasoning, leading to a superior performance over existing state-of-the-art methods for the inductive link prediction task.