Abstract:Medical image segmentation is crucial for clinical diagnosis, yet existing models are limited by their reliance on explicit human instructions and lack the active reasoning capabilities to understand complex clinical questions. While recent advancements in multimodal large language models (MLLMs) have improved medical question-answering (QA) tasks, most methods struggle to generate precise segmentation masks, limiting their application in automatic medical diagnosis. In this paper, we introduce medical image reasoning segmentation, a novel task that aims to generate segmentation masks based on complex and implicit medical instructions. To address this, we propose MedSeg-R, an end-to-end framework that leverages the reasoning abilities of MLLMs to interpret clinical questions while also capable of producing corresponding precise segmentation masks for medical images. It is built on two core components: 1) a global context understanding module that interprets images and comprehends complex medical instructions to generate multi-modal intermediate tokens, and 2) a pixel-level grounding module that decodes these tokens to produce precise segmentation masks and textual responses. Furthermore, we introduce MedSeg-QA, a large-scale dataset tailored for the medical image reasoning segmentation task. It includes over 10,000 image-mask pairs and multi-turn conversations, automatically annotated using large language models and refined through physician reviews. Experiments show MedSeg-R's superior performance across several benchmarks, achieving high segmentation accuracy and enabling interpretable textual analysis of medical images.
Abstract:Metabolic syndrome (MetS) is a medication condition characterized by abdominal obesity, insulin resistance, hypertension and hyperlipidemia. It increases the risk of majority of chronic diseases, including type 2 diabetes mellitus, and affects about one quarter of the global population. Therefore, early detection and timely intervention for MetS are crucial. Standard diagnosis for MetS components requires blood tests conducted within medical institutions. However, it is frequently underestimated, leading to unmet need for care for MetS population. This study aims to use the least physiological data and free texts about exercises related activities, which are obtained easily in daily life, to diagnosis MetS. We collected the data from 40 volunteers in a nursing home and used data augmentation to reduce the imbalance. We propose a deep learning framework for classifying MetS that integrates natural language processing (NLP) and exercise monitoring. The results showed that the best model reported a high positive result (AUROC=0.806 and REC=76.3%) through 3-fold cross-validation. Feature importance analysis revealed that text and minimum heart rate on a daily basis contribute the most in the classification of MetS. This study demonstrates the potential application of data that are easily measurable in daily life for the early diagnosis of MetS, which could contribute to reducing the cost of screening and management for MetS population.
Abstract:Visual grounding is the task of locating objects specified by natural language expressions. Existing methods extend generic object detection frameworks to tackle this task. They typically extract visual and textual features separately using independent visual and textual encoders, then fuse these features in a multi-modal decoder for final prediction. However, visual grounding presents unique challenges. It often involves locating objects with different text descriptions within the same image. Existing methods struggle with this task because the independent visual encoder produces identical visual features for the same image, limiting detection performance. Some recently approaches propose various language-guided visual encoders to address this issue, but they mostly rely solely on textual information and require sophisticated designs. In this paper, we introduce Multi-modal Conditional Adaptation (MMCA), which enables the visual encoder to adaptively update weights, directing its focus towards text-relevant regions. Specifically, we first integrate information from different modalities to obtain multi-modal embeddings. Then we utilize a set of weighting coefficients, which generated from the multimodal embeddings, to reorganize the weight update matrices and apply them to the visual encoder of the visual grounding model. Extensive experiments on four widely used datasets demonstrate that MMCA achieves significant improvements and state-of-the-art results. Ablation experiments further demonstrate the lightweight and efficiency of our method. Our source code is available at: https://github.com/Mr-Bigworth/MMCA.
Abstract:The impressive performance of ChatGPT and other foundation-model-based products in human language understanding has prompted both academia and industry to explore how these models can be tailored for specific industries and application scenarios. This process, known as the customization of domain-specific foundation models, addresses the limitations of general-purpose models, which may not fully capture the unique patterns and requirements of domain-specific data. Despite its importance, there is a notable lack of comprehensive overview papers on building domain-specific foundation models, while numerous resources exist for general-purpose models. To bridge this gap, this article provides a timely and thorough overview of the methodology for customizing domain-specific foundation models. It introduces basic concepts, outlines the general architecture, and surveys key methods for constructing domain-specific models. Furthermore, the article discusses various domains that can benefit from these specialized models and highlights the challenges ahead. Through this overview, we aim to offer valuable guidance and reference for researchers and practitioners from diverse fields to develop their own customized foundation models.
Abstract:Recently, machine learning techniques, particularly deep learning, have demonstrated superior performance over traditional time series forecasting methods across various applications, including both single-variable and multi-variable predictions. This study aims to investigate the capability of i) Next Generation Reservoir Computing (NG-RC) ii) Reservoir Computing (RC) iii) Long short-term Memory (LSTM) for predicting chaotic system behavior, and to compare their performance in terms of accuracy, efficiency, and robustness. These methods are applied to predict time series obtained from four representative chaotic systems including Lorenz, R\"ossler, Chen, Qi systems. In conclusion, we found that NG-RC is more computationally efficient and offers greater potential for predicting chaotic system behavior.