IncDSI: Incrementally Updatable Document Retrieval

Differentiable Search Index is a recently proposed paradigm for document retrieval, that encodes information about a corpus of documents within the parameters of a neural network and directly maps queries to corresponding documents. These models have achieved state-of-the-art performances for document retrieval across many benchmarks. These kinds of models have a significant limitation: it is not easy to add new documents after a model is trained. We propose IncDSI, a method to add documents in real time (about 20-50ms per document), without retraining the model on the entire dataset (or even parts thereof). Instead we formulate the addition of documents as a constrained optimization problem that makes minimal changes to the network parameters. Although orders of magnitude faster, our approach is competitive with re-training the model on the whole dataset and enables the development of document retrieval systems that can be updated with new information in real-time. Our code for IncDSI is available at https://github.com/varshakishore/IncDSI.

Latent Diffusion for Language Generation

Diffusion models have achieved great success in modeling continuous data modalities such as images, audio, and video, but have seen limited use in discrete domains such as language. Recent attempts to adapt diffusion to language have presented diffusion as an alternative to autoregressive language generation. We instead view diffusion as a complementary method that can augment the generative capabilities of existing pre-trained language models. We demonstrate that continuous diffusion models can be learned in the latent space of a pre-trained encoder-decoder model, enabling us to sample continuous latent representations that can be decoded into natural language with the pre-trained decoder. We show that our latent diffusion models are more effective at sampling novel text from data distributions than a strong autoregressive baseline and also enable controllable generation.

Robust Knowledge Graph Completion with Stacked Convolutions and a Student Re-Ranking Network

Knowledge Graph (KG) completion research usually focuses on densely connected benchmark datasets that are not representative of real KGs. We curate two KG datasets that include biomedical and encyclopedic knowledge and use an existing commonsense KG dataset to explore KG completion in the more realistic setting where dense connectivity is not guaranteed. We develop a deep convolutional network that utilizes textual entity representations and demonstrate that our model outperforms recent KG completion methods in this challenging setting. We find that our model's performance improvements stem primarily from its robustness to sparsity. We then distill the knowledge from the convolutional network into a student network that re-ranks promising candidate entities. This re-ranking stage leads to further improvements in performance and demonstrates the effectiveness of entity re-ranking for KG completion.

Dynamically Extracting Outcome-Specific Problem Lists from Clinical Notes with Guided Multi-Headed Attention

Problem lists are intended to provide clinicians with a relevant summary of patient medical issues and are embedded in many electronic health record systems. Despite their importance, problem lists are often cluttered with resolved or currently irrelevant conditions. In this work, we develop a novel end-to-end framework that first extracts diagnosis and procedure information from clinical notes and subsequently uses the extracted medical problems to predict patient outcomes. This framework is both more performant and more interpretable than existing models used within the domain, achieving an AU-ROC of 0.710 for bounceback readmission and 0.869 for in-hospital mortality occurring after ICU discharge. We identify risk factors for both readmission and mortality outcomes and demonstrate that our framework can be used to develop dynamic problem lists that present clinical problems along with their quantitative importance. We conduct a qualitative user study with medical experts and demonstrate that they view the lists produced by our framework favorably and find them to be a more effective clinical decision support tool than a strong baseline.